Alternaria dauci: 96082671
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Entry
96082671 CDS
T10615
Symbol
ACET3X_002349
Name
(RefSeq) hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
adac Alternaria dauci
Pathway
adac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
96082671 (ACET3X_002349)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96082671 (ACET3X_002349)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
96082671 (ACET3X_002349)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_SH3-like
Nup188_N
Phi29_MCP
Motif
Other DBs
NCBI-GeneID:
96082671
NCBI-ProteinID:
XP_069308896
LinkDB
All DBs
Position
2:join(793851..793915,793963..799543)
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AA seq
1881 aa
AA seq
DB search
MAPIQSPEFDLGKCLKGEQQLVTWDIAYRALCDPETASKSDVLRAFLTSTDSRDILSHPW
KPFADPSSQEKSKFETNTAPINITPPQTEHYNVEEIKEDSLWLAKEAQISEYAALQLVVQ
EWQGRPTAQLLSGLTEEEALSVQDAAGVGNLGASTFVPNSSILASPLASKTAHLDAKDQR
RLHILDVYHSTCASIVRISQLLVSWGCASNLRSQTIYGNDYLSIGAGWIEELGQAVAAAQ
DGPTGGKALDECLKAFSKRCDSLDTGYGWNVDDSILEAASEKWVVAQTTEMLHILHLALV
HADLVAKDFLPAATIEDWLKAFSFRGFFREFPAVTTRQEPLIPVIQLLTSLMSLTILKVD
KIMDDLESGDCNTWASSSYILNTAVVESITTIFGEAKLLGASPATPPTFAWAILTWKLTS
RASYEEQERERLLESSNNTGNPEPQTSPLEEAALAVARLETHELFDGKMPYEELANVSSA
VGVLAIVNQLVQTCLPAFGTPIDQISQDRIRLLFLQLIRAAVGSDIVAYSPDLIITTYTI
LTGDNSFRRWENGDVARHADPIVAYFLEDEYVLRPLLLNEARLRYPYEMTPFLKFCSALT
RGDKTMQNGLPTFIEKLGNHNRLMQQLPDGFKDYALTREEENANWVELTGNLPLFSSGVS
SSFRGQRRLLTSGASTQSDGFSGIPAGTEGIIVDDNASPYVAVWHHQHSTLSYLVELLST
YPVGSTKVETATQQPAPRESVIEIIGLFADLMHSSLHASEGVCSTELLEAIGIGAESSQD
TVNLVLAIFEEELLHLCQEPSNEACLELLVNCTHFLEALIIVLPHRVWPWLARSRLLEGD
GNGSLATILIGTEMVLGRYDFLIGCIRLYKGLIKDAVERSVSRKVPTKALSRFNAAAPSE
SGTSDKIMSTILFTFGRTLASIYESSLNWKYSHPNHRPEINIAICEIFTTILNLAYSVDD
EPKLSAKLARSIAPIAEYITQLYLAPSGSDLPTNPLMTSLITGVGPSDITLLTTSSALWM
QQTQTTLAFADILVRVAVLLHKPWTHLEQQLFKATPLLARLYATSDKWKSQVVLLLEALV
RGAVRVAGQDDSTMTDGDLKQSVRKQIEQQEPPSLLGHLGPRTAKNFLSVLSQLDEPLQI
VDIQTNVWNLLSAVVTCKQQWFSLYLLTGSTPRESIRSKKDATHDSRNKALLTRALDALS
SMALPDQEGGGLSWPLYTAMLEFVSSAQNNWSWAMGDLRQRKDLIQKLLAFMKWMAKQPK
QPKMSSNNETLGRSFQNRFASLACEVIAMYLHHSRQVGDITVLKDVVPSLTYLEDTALDL
PSYSTSLHGYLKQNLEKQYPGVTLGNIKRTTLYPETFGRAFFYDIDLAQRLLGFNSKWTG
PREGTGFAAEVEKANYNLGLVESQVLLLQGWKLLALELSQVVAKDERIVKVLVGVIQKCM
VANEQSNLPEALFGQLMVLRADLAFALLKKLVEAKVRTNEARQLLGPVWNAIRTSTPDFE
NVFSTDAVHYYRSLLRILYLALHFHLIEDTDASDDASFRSSFRGTMPTSHNKYAEPISTQ
LLEILSDTVAKGFRSLANQLHAEPSSVSPSDFALLTALLQRIIAIPEMSKWQQQAALLFA
NSNTVRYATSLFSWADRLTISHNGIDDPIYGELSVLFLLSLSSIQALAETMAVEGILSQL
NTANIMNYYRRVNGMGPFDNPARMYSIWTKGILPLCLNLLLSVGPPIAAEISSFLNQFPE
QLARSALSINSNPSSRTSASQKITLAVASEVHSLSLISSILENVRKQGPKLGIQANDVAL
LDWDKESIKEDVESWLSRKSALRERIVAVDERELEMLSSRKGQGEDALSELEKRVLGELE
DAGKCLGVGNGNGNGNGNEKK
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggcccccatccaatcgcccgagttcgacctgggcaagtgcctcaagggcgagcagcag
cttgtcacctgggacatcgcctatcgcgccctctgtgaccccgaaaccgcgtccaaaagc
gacgtcctacgcgccttcctcacctccaccgacagcagagacatcctcagccacccatgg
aagccctttgccgacccgtcgtcgcaagagaagagcaaattcgagaccaacacagcgccc
atcaacatcaccccgccccagacggagcactacaacgtcgaggaaataaaggaagacagt
ctgtggctggccaaagaggcgcaaatatcagaatatgcagccctgcagctcgtggtccaa
gagtggcagggcaggccgactgcacagctgctgagtggactcaccgaagaggaggccctc
agcgtacaggacgccgctggagtgggaaacctaggagcctcgactttcgtcccaaactcg
tccatcctggcttcaccgctcgcctccaagaccgcgcatctcgatgcaaaggaccagcgc
cgcctgcacattctcgacgtctaccactccacgtgcgcttccatcgtccgaataagccag
ctcctcgtttcatggggctgcgcatccaacttgcgcagccagaccatctacggcaacgac
tacctgagcattggtgccggttggattgaagagcttgggcaggccgttgcagccgcgcaa
gatggtcccacaggcggaaaggcgctggacgagtgcctgaaagctttttccaaaaggtgc
gattccttggacacgggttatggctggaacgtcgacgattccatactggaagctgcttcg
gagaagtgggtggttgcgcaaaccacagagatgctgcacattctgcatctcgccctggta
cacgccgacctggttgccaaggacttcctccctgcggctaccatcgaagattggctcaag
gccttcagcttccgcggctttttccgcgaattccctgcagtcacaactcgccaggaacct
ctcattccagtcatacagctgctgacgtctctcatgtctttgactatcctaaaggtagac
aagatcatggacgatcttgaatccggcgactgcaatacttgggcctcttcatcctacatt
ctcaacactgcggtagtagagagcatcaccaccatattcggagaggccaagctgctaggt
gctagcccggctacaccgcccacattcgcctgggcaatccttacctggaagctcacgagt
cgcgcgagctacgaggaacaagagcgtgaacgtctactcgaatcatcaaataacaccgga
aacccagaacctcagacttctccacttgaggaagctgctttggccgttgctagactcgaa
acccacgagctcttcgatggcaagatgccttacgaggagcttgccaatgtcagctcagca
gtgggtgtgttggctattgtcaaccagctggtgcagacctgtttgcctgcattcggaaca
ccaatcgatcagatttcacaagacaggatccgtctgctatttctgcaactcattcgtgct
gctgttggtagtgatattgtcgcgtacagcccggacttgataataacgacatacacgatt
ctgaccggcgataactccttccgcagatgggaaaatggcgacgtagctcgccatgctgac
ccaattgtcgcgtatttcctcgaagatgaatacgtccttcggccactgctgctcaatgaa
gctcggctacgctacccctacgagatgacacctttcctaaaattctgtagtgcattgacg
cgtggcgacaagacgatgcagaacggcctgcctacattcatcgaaaagcttggaaaccac
aatcgacttatgcaacaactaccggatgggttcaaggactatgcgttgacgcgcgaggag
gagaacgccaactgggtcgaacttacgggcaatcttccgcttttctcgtctggagtatct
tcgagcttccgtggacaacgtcgattgctgacctctggcgcatcgacgcagtctgacgga
ttctctggaatacctgctgggacagaaggaatcatcgttgatgacaacgcttcgccttac
gtggcggtttggcatcatcagcactctacattgtcatacctggtcgaacttctctccaca
taccctgtaggcagcaccaaagtcgagactgccacacagcagcctgcccctcgcgaaagt
gtcatcgaaatcatcgggctcttcgctgatctgatgcattcttctctacatgcttctgag
ggcgtttgttcgactgagctcctggaggcgattggcatcggtgccgagagtagccaggac
accgtcaatctcgtgctcgctattttcgaggaagagctcctgcacctctgtcaggagcca
agcaatgaggcgtgtttagagctgttggtcaactgcactcacttcctagaggctttgatt
attgttcttccacatagagtatggccctggctcgccaggagtagattgctcgaaggcgac
ggcaatggtagcttagcgactatcctcattggcactgaaatggttctgggacggtatgac
ttccttattggctgtatccgactctacaagggtctcatcaaagatgctgtcgagcgatca
gtctcacgcaaagtcccaacaaaagcactcagtcgcttcaatgctgctgcgccttcagaa
agcggaacctcggataagatcatgagcacaatactcttcacattcggccgaactcttgct
agcatttacgagagctcgttgaactggaaatactctcatcccaaccatcggcctgagatc
aacatcgccatctgcgaaattttcacgacgattctgaaccttgcatacagcgtagacgat
gagccgaagctatctgctaagctcgccagatccattgcgcctatcgcagagtatatcact
cagctataccttgcaccatctggctcagatcttccgacgaacccgctgatgacctctctg
atcactggtgtcggtcccagcgatatcacgttgctcacgacttcgagtgcattgtggatg
cagcagacacagactactctggccttcgctgacatccttgttcgggttgctgtactcttg
cacaaaccctggacacacttggagcagcaactcttcaaggctacgccattactggcacga
ctgtacgcaaccagcgacaaatggaagtcgcaggtcgtgctactgttggaagctcttgtt
cgtggtgctgtccgtgtcgccggacaagatgactcaacgatgacagacggagacctcaaa
cagtctgtacggaaacagattgagcagcaagagccgccttcactactcggtcatctcgga
ccacggactgcgaagaacttcttgagcgtactctcgcagcttgatgagcctttgcagata
gtggatattcagactaacgtctggaacctgctttcggctgtagtaacatgcaaacagcaa
tggttctccttgtatctgctcactggtagcacgcctcgcgagtctattcgctccaagaaa
gacgcaactcacgattcaaggaataaagcgctacttacgcgagcgctggacgcactctcg
agcatggctctaccggatcaagaagggggtgggctttcatggcctttatacaccgccatg
ctcgagtttgtttcatccgcgcaaaacaattggtcatgggcaatgggtgacctccgacaa
cggaaagatctgatccagaaactgctcgctttcatgaagtggatggcaaagcagcccaag
caaccgaagatgagcagtaataacgagaccctcggacgctcattccagaacaggttcgca
tcgttggcctgcgaagtcatcgccatgtacctgcaccactcacggcaggtgggcgatatc
accgtactcaaagatgttgtgccaagcctgacatacttggaagacactgctttggatcta
ccgtcctacagtacttctctgcatggttatcttaagcagaacctggagaagcaataccct
ggtgtcacgctaggcaacatcaagcgaaccacactgtacccggagacctttgggcgggcg
ttcttctacgacatcgaccttgcccagcggcttttgggcttcaacagcaagtggacaggt
cctagagaaggcaccgggttcgcggctgaagtcgagaaggccaattacaaccttggactg
gttgagtctcaggttctgctgcttcaaggctggaagctgctggctctggagttgagccaa
gtcgtagccaaggacgagcgaatagtcaaggtactcgtgggcgtcatccagaagtgcatg
gtcgccaacgaacaatccaatctcccagaggcgttgtttggccagctcatggtactgcga
gcagatctagcctttgcactattgaagaagctggttgaggcaaaggtacgaacgaatgag
gcacgtcaactactcggtccagtgtggaacgcgattcgcacctccacgcccgactttgaa
aacgtattttcgaccgacgctgtgcactactaccgatccttactgcggatcctctacctt
gccctccatttccatctcatcgaagatactgatgcttccgatgacgcatccttccgctct
tcgttccgtggcactatgcccacaagccacaacaaatatgccgagcccatctcaacccaa
ctccttgagattctttccgacacagttgcaaagggcttccgcagccttgccaaccaactc
cacgctgaaccttcatccgtctcgccatcggactttgctctcctcactgcacttctccaa
cgtatcattgcgataccagagatgtcaaagtggcaacaacaggcagctctcctcttcgcc
aacagcaacaccgtgcgctacgccaccagtctcttctcgtgggctgaccgtctaacaata
tcgcacaacggcatcgacgaccccatctacggtgaactcagcgtactgttcctgctctcc
ctgtcaagcatccaggccctcgcggagaccatggctgtcgagggcatactcagccaactc
aataccgcaaacatcatgaactactaccgtcgtgttaacggcatgggtcccttcgacaac
ccagcacgcatgtacagtatctggaccaaaggcatcctgccactctgcctcaaccttttg
ctttcagtcggcccgcccattgcagcggaaatctcatccttcttgaaccagttcccagaa
cagctcgcccgctcggccctgagcataaattcaaacccttcgtcccgcacctcggcttcc
cagaagattacgcttgccgtcgcttcggaagtgcattccttgtcactcatatccagtata
ttggaaaacgtgcgcaagcaaggtcccaaactgggtattcaggccaacgacgtcgcactc
ctcgactgggataaggagagcatcaaggaagatgtcgagagctggttgagccgtaagagc
gcgttgcgtgaacgtattgtagcggtcgatgagcgcgagttggagatgctgagtagcagg
aaggggcagggagaggatgcattgagcgagctggagaagagggttctcggtgagctggaa
gatgcggggaagtgcttgggtgtgggtaatgggaatggaaatgggaatggcaatgagaag
aaatag
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