Alternaria dauci: 96082701
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Entry
96082701 CDS
T10615
Symbol
ACET3X_002379
Name
(RefSeq) hypothetical protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
adac Alternaria dauci
Pathway
adac03013
Nucleocytoplasmic transport
adac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
96082701 (ACET3X_002379)
03015 mRNA surveillance pathway
96082701 (ACET3X_002379)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96082701 (ACET3X_002379)
Enzymes [BR:
adac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
96082701 (ACET3X_002379)
5.6.2.5 RNA 5'-3' helicase
96082701 (ACET3X_002379)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
96082701 (ACET3X_002379)
mRNA cycle factors
Common to processing body (P body) and stress granule
96082701 (ACET3X_002379)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
UPF1_1B_dom
AAA_11
AAA_30
AAA_19
ResIII
DEAD
NPHP3_N
UvrD-helicase
Helicase_RecD
nSTAND3
AAA_22
AAA_5
SLFN-g3_helicase
ATPase
AAA
PhoH
Motif
Other DBs
NCBI-GeneID:
96082701
NCBI-ProteinID:
XP_069308926
LinkDB
All DBs
Position
2:join(928368..928626,928681..930179,931050..931661)
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AA seq
789 aa
AA seq
DB search
MEGAFTHMGNHLVSDSAATINAGDVDEGILDGDLARGGLSRRRRADDDEEYDEDDLESMA
SMPVGGRNGQSAMRAEDAEVELPAHACAYCGIHNAGSVVKCLACSKWFCSARGNSSSSHI
INHLVRARHKEVQLHPASSLGDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAM
PSQKDMNWDTSRWQPLIEDRSFLPWLVPAPTDQEQLRARHLSPQTIAKLEELWKDNANAT
IADLEKGAGQEEVIAKVLLRYDDAFQYQNVFGPLVKIEADYDRKLKESQSQDNLVVRWDM
ALNNKHTASFILPKLELGDVKLAVGDEMRLRYTGELRPHWEGVGYVIKIPNNQSDEVTIE
LRTKGDHKSVPTECTHNFSADYVWKATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVA
AAPMKIQIPRKFSVPGLPELNASQINAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLCK
ISGSQVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTN
VELNKLNQLKSDVGELSSQDEKKFKQLTRAAEREILNAADVICCTCVSLLQFSRPKQTYR
GPQRYQMAYQHANAMTSGRQAGFNGNKPRQEYNDNGSIVGYIPDDVSSVHSSALGGVGVP
SNYPPMFSNFQESWPLPGRPNGKGKNGAPQSVAGESIAASELTDTRSDAPGGISLSGLSL
NDYNKPTSLSQSDRLNRYVENTRQGPNVGTGFGAGRGLPRGLGGFEDDDARSVSTAFASQ
IGTGNNGYD
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcctttacgcacatgggcaaccacctggtgtccgactcagccgccaccatc
aatgccggcgatgtagacgagggcatcctggacggcgacctggcccgcggcggtctttca
cgtagacgacgcgcagacgacgacgaggaatacgacgaggacgacctggagagcatggcc
agcatgccagtaggcggacgcaatggccagtctgccatgcgggcggaagatgccgaggtt
gaactaccagcacacgcttgcgcatactgcggtattcacaatgccggcagcgtcgtcaag
tgccttgcatgcagcaagtggttctgcagcgctcgtggcaactcttcgtcctcgcacatc
atcaaccatctcgttcgcgcccgccacaaggaggtccagctccaccccgcctcctcgctc
ggcgacacgacgctcgaatgctacaactgcggcaccaagaacgtcttcctcctcggcttc
atccccgccaaatcagacacggtcgttgttctgctgtgccgccagccatgcgccgccatg
ccctcccaaaaggacatgaactgggatacctcgcgttggcagccgctgatcgaggaccgc
tccttccttccctggctcgtgcctgccccgaccgaccaggagcagctccgcgcccgccat
cttagcccccagaccattgccaagctggaagagttgtggaaggacaatgcaaatgccacc
attgccgatctcgaaaagggcgctggtcaagaggaggtcattgccaaggtcttgctccga
tacgacgacgccttccaataccagaacgtctttggtcccctggttaagatcgaggctgac
tacgaccgcaagttgaaggagtcgcaatcgcaggataacctggtcgttcgctgggacatg
gccctgaacaacaagcataccgctagcttcatcctccccaagcttgagttgggcgacgtc
aaactcgcagtcggcgacgagatgcgactacgctacacaggagaactccgcccacactgg
gagggtgttggttatgtcatcaagattcccaacaaccagtccgatgaggtgacgattgag
ctgcgcacaaagggcgatcacaagtctgttcctaccgagtgcacacacaacttcagcgcc
gattacgtctggaaggctacttcattcgaccgcatgcaacacgccatgaagacttttgcc
attgacgagatgagcgtgtcgggttatattttccatcgtcttcttggtcatgaggttgct
gctgcgcccatgaagattcaaattccccgcaagttcagcgtcccgggcctccccgagttg
aacgctagtcagatcaatgctgtaaagagcgtccttcaaaaaccacttagcttgatccag
ggtcctccaggtaccggaaagaccgtcacttctgccaccatcatctaccatctctgcaag
atcagcggcagtcaagtcttggtttgcgcgccctccaacgtcgctgttgaccagctgtgt
gaacgcattcatcttactgggctgaagaccgttcgtgtcaccgccaagtctagggaggat
gtcgaatctccggttggcttcctctctcttcacgagcaagtccgcatgaacgacaccaac
gttgagctcaacaagttgaaccagctcaagagcgatgtcggcgaactgtcaagtcaggac
gagaagaagttcaagcagctcactcgtgcagccgagcgcgagattctaaacgcagccgat
gtcatctgctgtacctgtgtctcgcttctgcagttcagccgcccaaagcagacctaccgt
ggacctcagcgctaccagatggcctaccagcatgccaacgctatgacatctggtcgccag
gctggcttcaacggcaacaagcctcgccaggagtacaatgacaacggatctattgtcggc
tacatcccggacgacgtttcttcggtccactcatctgcccttggtggtgttggtgtcccg
tccaactaccctcctatgttttccaatttccaggagtcttggcctcttcctggtcgtcca
aatggcaagggcaagaacggcgccccccaaagcgttgctggtgagtcaatcgccgccagt
gagcttaccgacactcgcagcgatgcaccgggtggtatcagtctttctggtttgagcctg
aacgactacaacaagcctacttcacttagccagtctgaccgcctcaaccgctacgtagag
aacacccgccagggcccgaacgttgggactggcttcggcgctggtcgtggtctgccacgt
gggcttggtggcttcgaagatgacgatgctcgtagcgtttctacggctttcgccagtcag
ataggcactggcaataacggatacgactga
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