Alternaria dauci: 96082932
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Entry
96082932 CDS
T10615
Symbol
ACET3X_002610
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
adac Alternaria dauci
Pathway
adac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
96082932 (ACET3X_002610)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96082932 (ACET3X_002610)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
96082932 (ACET3X_002610)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Drf_FH1
Motif
Other DBs
NCBI-GeneID:
96082932
NCBI-ProteinID:
XP_069309157
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All DBs
Position
2:join(1802107..1802248,1802381..1803216)
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AA seq
325 aa
AA seq
DB search
MNADRRRNNAPSGGTSAPVFARTIREPQYLERLRPTRSRGANELRRIFLQTSIIPSASGS
AYLEIPSSSPATKSTLIPPTSSLKITASIQGPKPLPRSAPFSPSLLLTTTVKFAPFATRQ
RRGYIRDAAERDLGVHLETALRGVIIGERWPKSGVEVVVTILEGDEDGWWGDSADEKSAT
GSGWGLLNVLSGCITVASAAITDAGIDCVDVVCGGVAAITRNPESTQQQDLARILDPCPA
EHREVVAACVVGYLASRDEITEIWMKGDVGSDPDALIEGATHAAVGSLAVVKEVLLEALQ
AKFQGQIEGGESGLKRKTRDVDMTG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgacagaagacgaaacaatgcgcccagcggcgggaccagtgcgcccgtgttt
gcgcgaacgatcagagaaccgcagtacctggagagattgagaccgacaaggtcaagaggc
gcgaacgagcttcgcaggatctttctccaaacatccattataccttccgcgtcgggctct
gcctacctcgagataccttcttcctcccctgcgaccaaatcgacgctcatcccgcccacc
tcgtcgctcaagatcactgcttctatccaaggccccaagcctcttccccgcagcgcgccg
ttcagtccatcgctcttgctcacgaccaccgtcaagttcgccccgtttgcgacacgtcaa
aggcgaggctacatacgcgatgcggcagagcgtgatctgggtgttcacctggagactgca
ctccggggggtcatcatcggagagagatggccgaagagcggagtcgaagtagtggtcacc
atcctggaaggtgatgaagacggctggtggggagactctgcagacgaaaaaagcgcaacc
ggaagtggatggggtcttttgaacgtgttgtcagggtgcataacagtcgccagcgcggcc
ataacagacgccggcatagattgcgtggatgtagtgtgcggaggtgtcgctgcaatcaca
cgcaatcccgagtcaacacaacagcaggacttggctaggatacttgacccctgtccagca
gagcacagggaagtcgtcgctgcatgtgtagtcggctacctggcttcgagagacgagatc
acagagatatggatgaagggcgacgtcggctcagatcctgatgcgttgatcgagggagcc
acacacgcggctgtgggcagtctcgcggtggtcaaagaggtcttgctggaagcgcttcaa
gccaagttccaaggccagatcgaggggggcgagagcgggctgaagaggaagacacgagat
gtggacatgacaggatga
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