Alternaria dauci: 96082942
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Entry
96082942 CDS
T10615
Symbol
ACET3X_002620
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
adac Alternaria dauci
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adac03041
]
96082942 (ACET3X_002620)
Enzymes [BR:
adac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
96082942 (ACET3X_002620)
Spliceosome [BR:
adac03041
]
Complex C
Other components
Complex C specific factors
96082942 (ACET3X_002620)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
NACHT
Cas3-like_C_2
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
96082942
NCBI-ProteinID:
XP_069309167
LinkDB
All DBs
Position
2:complement(join(1833517..1835396,1835448..1835595))
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AA seq
675 aa
AA seq
DB search
MADDGDIESALIPSLYKPPALLPIAQLKDQLLYTIETYPVTIVVGETGSGKTTQIPKFLL
EAGWCNSGQQIAITQPRRIACTSVAARVAEELATPLGQKVGYSIRFEDVTSAATHVKFVT
DGLLLREMLVDPLLSRYSVIMVDEAHERSLSSDILLSLLKKVLAKREDLRVVVSSATLEA
ERFLDFLSPDQGEKIHGKSKEEFGCIVGIQGRTYPVEIQYLQEPTNNYVEASIDAVMKIH
EHEGKGDILVFLTGREEIDDAIDKLGDRIAEMSSSQQRLMPLPLYAGLPTEDQNLIFTKP
PQDTRRVMFSTNISEASVTIDGIVFVIDTGYVKLRAYNANLGIENLAVVPVSKASATQRA
GRAGRTRPGKCFRLYPESVYEGLEEATFPELARSNLAPVILQLLNLGITNVVRFDYLSPP
PSALVTRALDMLYSLGALDAHARLTKPFGTRLAELPLEPMLGRAVLKAAEPEFGCLSEML
TIAAMMTLQGNAFVSHDGGKKQLDAARRKFAVAEGDHLTLYNVYEAFVKAGMGNTAWCHS
NSLNHKSLVKAVSVRKQLAAYLDRFGVKENVLASSGVLRVGGTPLAERVRRCLTTGFFAH
AARMKADGTFTTVDGKTTLWAHPSSVFFTRKADWVIYTEIQSTRDKTYIRDLSTVDMDWL
TQYAPEYYKIKNGGR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatggggatatcgagtctgctttgatcccaagtttgtataagccacccgca
ttgctaccaatcgcacaactcaaagaccaactgctctacacgatcgagacgtaccctgtg
actattgttgttggtgaaacaggcagcggcaagacaacgcagataccaaaattcctgctc
gaagcgggctggtgcaatagcggccagcagatagccatcacccagccccgacggatagca
tgtaccagtgtagctgcaagagtggcagaagagctagcgacgccactcggccagaaggtc
ggatacagtatccgatttgaagatgtcacgtccgcagccacgcatgtaaagttcgtcaca
gacgggttgctgctacgtgagatgcttgtcgacccgctactctcccgctactctgtcatc
atggttgacgaagcacatgagcgcagcttatcgtctgatatactgctgagcttactgaag
aaagtactggcgaaaagggaagacttgcgcgttgttgtgagcagcgctacgctcgaagcc
gaacgctttcttgacttcctcagccccgatcaaggcgagaagattcatggcaagagcaag
gaagaatttggatgcattgttggtatccagggacgcacctatccggttgagattcagtat
ctacaggaaccaacaaacaactatgtcgaagcatcgatcgacgctgtcatgaaaatccac
gagcatgagggcaagggtgacattctcgtctttctgacagggcgcgaagagatagatgac
gcgatcgataaactgggcgatcgcattgccgaaatgtcttcgtctcagcaaaggctcatg
cctctacccctttacgccggcctgcccacagaagaccagaatctcatcttcacaaagcca
ccgcaggatacgcgacgtgtcatgttcagcaccaacatttccgaggcgtctgtaaccatc
gacggtattgtcttcgtgatagacacaggatacgtcaagctccgcgcctacaacgccaat
ctcggcatcgagaatctcgccgtcgttccggtatcaaaagccagtgctacacaaagagct
ggtcgcgctggccggacaagaccgggcaaatgctttagactgtacccggaaagtgtatat
gagggcctggaggaagccacgtttccagagcttgcgcgctcaaaccttgcacctgtgatt
ctgcagcttctcaacttgggtatcacgaacgtggtgcgattcgactacctctccccgcca
ccatcagcgctcgtaacacgcgccctagatatgctgtactccctgggagccttggacgct
cacgctcggctgaccaagcccttcggtacgcgcctagcagagctgcctctcgaaccaatg
cttggccgcgctgtgctgaaagctgctgaaccagagtttggttgcttgagcgagatgctc
acgatagccgccatgatgacactccaaggtaacgcctttgtgtcccacgatgggggaaag
aaacagctcgatgcagcaaggcggaaatttgctgtagcagagggggatcatcttacacta
tacaacgtgtacgaagcctttgtgaaagctggcatgggtaacacggcatggtgccactcg
aacagtctcaaccacaaatccctcgtcaaggcagtcagcgtccggaaacagttggctgcc
tacctggaccgttttggggtaaaagaaaatgttctcgcatcgtcgggcgtgctgagggtt
ggcggcacaccacttgccgagcgtgtccgtcgctgtttgactacggggttcttcgcgcat
gctgcaaggatgaaggcagacgggacgtttaccaccgtggacgggaagacgacactatgg
gctcatcccagttctgtgttcttcacgcgaaaggctgattgggtcatatacacggagatt
cagtctacaagagacaaaacctacatcagggatctgagcacagtggacatggactggcta
acacagtatgcgccagagtattacaagatcaagaatggcggtcggtag
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