Alternaria dauci: 96083377
Help
Entry
96083377 CDS
T10615
Symbol
ACET3X_003055
Name
(RefSeq) hypothetical protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
adac Alternaria dauci
Pathway
adac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
96083377 (ACET3X_003055)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96083377 (ACET3X_003055)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
96083377 (ACET3X_003055)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
96083377
NCBI-ProteinID:
XP_069309602
LinkDB
All DBs
Position
2:join(3109817..3109857,3109902..3110153,3110200..3110447,3110501..3110787)
Genome browser
AA seq
275 aa
AA seq
DB search
MSTIVKEASQSSYPPVIPKDFNGNQPKTIRLFPLSNYTFGTKDGQPEEDPSVLARLKRLE
EHYAEHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLRAEDDEIEGFKARLNER
LAPVGTQFTGEGVNDEWVVGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRS
KVLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLSRYNFEFVDEEGNVAACTPGVGP
PEGYRPHTKVLAGGDGEDTRMDQNGDGTGSDITLS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgatagtaaaggaagcttcccagagctcataccctcccgtgatccccaaggac
ttcaatggcaaccagcccaagacgattcgcctatttcctctcagcaactacacattcggc
accaaagatggccagcccgaggaggacccgtcggtgctcgcccggctcaagcggttagaa
gagcactacgcggagcacggcatgcgacgaacgtgcgaaggcatcctcgtctgccacgaa
cacaaccacccgcacatcctcatgctgcagattgcaaacgccttcttcaagctacccggc
gactacctccgtgccgaggacgacgagatcgagggcttcaaggcgaggctgaacgagcgc
ctcgccccagttggcacacaatttactggcgagggcgtcaatgacgaatgggttgtcggc
gatacactggcgcagtggtggcgccccaacttcgagaccttcatgtacccttttattcct
gcgcacgtcaccaggccaaaggagtgcaagaagctgtactttatccagctcccgcgcagc
aaggtactgagcgttccgaagaacatgaagctcctcgccgttccgctattcgagctttac
gacaacaccgcacgatacggaccgcaactctcagcaatccctcatctgctctcgcgctac
aacttcgaatttgttgacgaggaaggaaatgttgcagcatgcacgcccggtgtaggccca
cctgaaggataccggcctcataccaaggttcttgcaggtggagacggggaagataccagg
atggaccagaacggagatggcacagggagcgatatcactctctcgtaa
DBGET
integrated database retrieval system
