Alternaria dauci: 96083641
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Entry
96083641 CDS
T10615
Symbol
ACET3X_003319
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
adac Alternaria dauci
Pathway
adac03013
Nucleocytoplasmic transport
adac03015
mRNA surveillance pathway
adac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
96083641 (ACET3X_003319)
09122 Translation
03013 Nucleocytoplasmic transport
96083641 (ACET3X_003319)
03015 mRNA surveillance pathway
96083641 (ACET3X_003319)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96083641 (ACET3X_003319)
03041 Spliceosome [BR:
adac03041
]
96083641 (ACET3X_003319)
03009 Ribosome biogenesis [BR:
adac03009
]
96083641 (ACET3X_003319)
03012 Translation factors [BR:
adac03012
]
96083641 (ACET3X_003319)
Enzymes [BR:
adac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
96083641 (ACET3X_003319)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
96083641 (ACET3X_003319)
mRNA cycle factors
Stress granule specific factors
96083641 (ACET3X_003319)
Spliceosome [BR:
adac03041
]
Complex C
Other components
EJC/TREX
96083641 (ACET3X_003319)
Ribosome biogenesis [BR:
adac03009
]
Eukaryotic type
90S particles
Helicases
96083641 (ACET3X_003319)
Translation factors [BR:
adac03012
]
Eukaryotic type
Initiation factors
eIF-4
96083641 (ACET3X_003319)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
96083641
NCBI-ProteinID:
XP_069309866
UniProt:
A0ABR3US36
LinkDB
All DBs
Position
2:join(3926633..3926918,3926967..3927821,3927868..3927926)
Genome browser
AA seq
399 aa
AA seq
DB search
MADGIDRNADDKMEFSTSKEVTVAPTFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQIC
KGRDTIAQAQSGTGKTATFSISILQVIDTAVRETQALVLSPTRELATQIQQVIVGLGDYM
NVQCHPCVGGTNVGEDIRKLDYGQHVVSGTPGRVADMIRRRNLRTRNIKMLVLDEADELL
NRGFREQIYDVYRYLPPATQVVVVSATLPYDVLEMTTKFMTDPVRILVKRDELTLEGLKQ
YFIAIEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQ
KERDSIMADFRQANSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGR
KGVAINFVTQDDVRILRDIELYYSTQIDEMPMNVADLLS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaatcgatcgaaatgccgacgacaagatggagttctccacttccaaggag
gtcacggtcgcgccaaccttcgaggccatgcacctcaaggagaacttgctgcgcggtatc
tacgcctacggttacgaatcgccttcagccgtgcagtcacgtgctattgtgcaaatctgc
aaaggtcgcgacactatcgcgcaggcgcagtccggaacgggaaagactgcgactttctcc
atctctatccttcaggtcatcgacacggctgtgcgcgagacgcaggcactcgtactgtcg
cccactcgcgaacttgcgacccagattcagcaggtcatcgtcggtctcggtgactacatg
aacgtacaatgccacccatgcgtcggaggaaccaatgtgggcgaggacatccgcaagctc
gactacggccagcacgttgtctctggaaccccgggacgtgttgctgacatgattcgccgc
cgcaaccttcgcacacgcaacatcaagatgctcgttctcgatgaagccgatgagctcctc
aaccgtggtttccgtgaacaaatctacgacgtctaccgctacttgccacccgcgacacag
gtcgtggtcgtttcagccaccctgccctacgatgtgctcgagatgacaaccaaattcatg
acggaccccgtgcgcattctggttaagcgtgacgaattgacgctagagggcctcaagcaa
tactttatcgccatcgagaaggaagagtggaagtttgacacgctgtgcgatctctatgac
acactcaccattacacaagcagtaatcttctgcaacacccgccgcaaggttgactggctc
accgacaagatgcgtgaggccaacttcaccgtatcctccatgcatggagagatgccccag
aaggagcgagacagcatcatggccgacttccgccaggccaactctcgcgtgctcatctca
accgatgtgtgggcgcgtggtattgacgtgcaacaagtgtcgctggtcatcaactacgat
cttccctcgaaccgtgagaactacatccacaggatcggtcgaagcgggcgattcggacgc
aagggtgtggctatcaacttcgtcactcaggatgacgttcgtattctccgtgacattgag
ttgtactactctacccagatcgatgagatgcccatgaacgttgcggacctgctctcatag
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