Alternaria dauci: 96083744
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Entry
96083744 CDS
T10615
Symbol
ACET3X_003422
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
adac Alternaria dauci
Brite
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
96083744 (ACET3X_003422)
Chromosome and associated proteins [BR:
adac03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
96083744 (ACET3X_003422)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
96083744 (ACET3X_003422)
microRNA pathway
RISC loading complex
96083744 (ACET3X_003422)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
96083744
NCBI-ProteinID:
XP_069309969
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All DBs
Position
2:complement(join(4233810..4233832,4233896..4234167,4234226..4234302,4234379..4234852,4234906..4235733,4235835..4236040,4236090..4236639,4236694..4237461))
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AA seq
1065 aa
AA seq
DB search
MPLKPEQRQLIEDNMGDNPCIVCVNTHPEKGGKMHAWLCTQANGPISTMSWIGKNFPLAQ
RREARAYVFQLKRLGNIPSQTPTQPVASPVAPPGDEAPSDQVPESTESGEGQDAQTPAPS
AATAPAITQQQKDQELAAVNRKMDSLKHGETPILSQYPVRTKSCATIQDAVHTTVKTNFF
KIDIDPKTVFYEYQILDLPIGQNKKKLEKLVRALIDRMNILKSNKDHFTTDNITTIISWK
KLHKKEEVGDIIDTCDLLRVLDFSKLSEYVGGSMVNPHLWDSSIEVKALNMLISKSLKDQ
QVIRMGANKFFVKNEERYLSDSLTMMQGYFYTIKPLDAGILLNVSYGTSAFYQSQTVEKF
LQDEKTFRPEKSRWAALNALRAQISYGRGKTPKGREDDRNNSEGRQKTIAGTSLKDLTFE
KKAANGSKFNKNVLEYLQESYPDEFKEEKGNLPGINLGTPRDKEWFAPAKLKILPHQIYR
RPIPDILIDKMLKRAAMIPHDGVHLIDKAGCEPLTVVPKLLQIDSTILRYPSIIYGGHKK
IDLYNQSKKNGGSGETPRWTLKNCNFLESGPTAGACVNVYLLATEKIAAFETALKEALGT
YNIADSKNNKRYGLTPQKVLASLGDAELRRALHEVKLTSSGPRKKIVLLLLRNSNRTIYQ
SFKDLADREFGLQTVCITQEKVCDKGTGALARGYEQYLGNVMMKVNLKCGGINHSAGDSA
KNSNESLQTKLGDVMILGTDVTHPSVASIEGCPSIASIVGSVDGFGGKFLGSMRLQNPDR
TDREIIQEVESMVEERLRAYWNYPVKPTNSTIPKPRERLPKKTMYYRDGVSEGQSGKSIR
EEVSAIRRAFEKVKKEKKWKEDMKLTSIVVTKRHHTRFYPTRDQDAEGKPKNCKPGTVVD
TSVTSPYFKEFFLQSHSGLQGTTKPAHYFVIQDDAEWDVADLTHQLSYTYVRASCGVSYA
PPTYYADRLCERGRIYLRSFLNGNSSALDTINNKKTAMEAEQRTLREAISKPAKEQKKQD
TRVWPAKTKEEEVMELLHKDQVSKMCKGLALEEASKVWDDTMFWM
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgccactcaaaccagaacagcgacaactcatcgaggataatatgggagacaacccatgt
attgtatgcgtgaacactcatcctgaaaagggcggcaagatgcacgcctggctctgtacg
caagcaaacggcccaatatccaccatgagttggattggaaagaactttcccttggcacag
aggagggaagctcgcgcatacgtctttcagttgaaaaggctcggtaatattccttcccaa
actcccactcagcctgtcgcttcccccgtcgctcctcctggcgacgaagcaccgtccgac
caagtcccagaatctacagaatcgggagaaggtcaagatgcgcagaccccagctccatcc
gcagcaactgcgcctgccattacgcaacagcagaaagaccaagagcttgcagcagtcaat
cggaaaatggactctctcaaacatggcgaaacaccaatattgtcacaataccccgttcgt
actaaatcttgtgcaactatccaggatgctgttcacaccacggtcaagaccaacttcttc
aagatagatatcgatccgaagacagtattctatgagtaccagattcttgatcttcctatt
ggccagaataagaagaagctagaaaagcttgttcgtgctctgattgatcgaatgaacatt
ttgaagagcaacaaagaccacttcacaactgacaacatcactaccatcatatcttggaag
aagctgcataagaaagaagaagtcggagacattattgacacatgcgatcttcttcgtgtt
ctagacttttctaagctcagtgagtatgttgggggcagcatggtgaatccacacctttgg
gactccagcatcgaggtcaaggctctgaacatgttgatctcgaagagcctcaaagaccaa
caggtcatacgaatgggtgcaaacaaattcttcgtcaaaaacgaagaacgatacctctct
gactccctcacgatgatgcaggggtacttctacactatcaagcctctagatgccggtatc
cttctcaatgtcagttacggtaccagtgctttctatcagtctcagactgtggaaaaattc
ctccaggatgaaaaaacatttcgccccgagaaaagtaggtgggcagcactcaatgcttta
cgagcccagatttcatacgggcgtggcaaaacccccaaaggccgcgaagacgaccggaat
aattcagagggcagacaaaagaccatagcaggtacgagcctaaaggacctcacgttcgaa
aagaaggcggccaacggttccaaattcaacaagaacgtactggagtatctacaagagtcc
taccccgacgagttcaaggaagagaagggcaatcttcctggcatcaatcttggcactcca
cgcgacaaagagtggtttgctcctgcaaaactcaagatactaccgcaccagatctatcgt
cgccccattcctgatattctcatcgataagatgctcaagagagccgccatgatacctcat
gatggtgttcacctgatcgataaagccggctgcgaaccactgactgttgtacccaagctt
ctgcagatcgacagcaccatcttgcgttatccatcgatcatctatggtggccataagaaa
atcgatctttacaaccagtccaagaagaatggtggatctggggagacacctcgttggacg
ctgaagaactgcaacttccttgagtctggccctacagccggtgcctgcgtgaacgtgtat
ctgctggcgaccgaaaagatcgcagcttttgaaaccgccttgaaggaagcgcttggcaca
tacaacattgctgactccaagaataacaagcgatatggactgacgccacaaaaggtgcta
gcaagcctcggcgatgccgaactgcgaagagctctccacgaggtaaaactaacatccagt
ggaccacgcaagaaaattgttcttctcttgctacgcaattccaacaggaccatttaccag
tccttcaaagatctagctgatcgcgagttcggattgcaaacagtatgcatcacccaagag
aaggtctgcgataaagggacaggtgctctggcaagaggttacgaacaatacctcggcaac
gtcatgatgaaagtgaatctcaagtgcggaggcattaaccattcggctggcgatagcgcg
aagaattccaatgagtccctacagaccaagcttggggacgttatgatccttggaaccgat
gtcacacatccatcggtggcctctattgaaggatgcccttctattgcctctattgtcggc
tcagtcgatggctttggtggcaagttcctcggatcaatgcgcctccaaaaccccgatagg
acggatcgcgagatcatccaagaagtcgaatcgatggtcgaggagcgtctgcgagcttac
tggaactaccccgtcaaacctacgaactcaaccatccccaagccacgagagaggctaccg
aagaaaaccatgtactatcgcgacggcgtaagcgagggacaatctggcaaatccatacga
gaagaagtaagcgccatcaggagggcgtttgaaaaagtcaagaaagagaagaaatggaag
gaagacatgaaactcacttcgatcgtcgtcactaagcgccaccacacgcgtttctaccct
acacgcgatcaagatgcagagggcaaacccaagaactgtaagccgggtactgttgttgat
acatccgttacatcgccctactttaaggagttcttcctccagtcccacagtggcttgcag
ggtactacgaaacctgcacactactttgtcattcaggatgatgccgaatgggatgtagca
gatctgacccaccagctctcctacacgtacgttcgtgccagctgtggtgtatcttacgct
ccgcccacctactacgcagacagactatgcgaacgcggcagaatctacctccgttccttc
ctcaacggcaacagctccgccctcgatacgatcaataacaagaaaaccgctatggaagca
gaacagcgcacactgagagaggccatctccaaaccggccaaggaacaaaagaagcaagac
actagagtctggccggcgaaaacaaaggaagaagaggtcatggagctgctgcacaaggat
caagtgtccaagatgtgtaaggggttggcgttggaggaagcgagtaaggtctgggatgat
actatgttttggatgtag
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integrated database retrieval system