KEGG   Alternaria dauci: 96084206
Entry
96084206          CDS       T10615                                 
Symbol
ACET3X_003884
Name
(RefSeq) hypothetical protein
  KO
K12601  superkiller protein 8
Organism
adac  Alternaria dauci
Pathway
adac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:adac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    96084206 (ACET3X_003884)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adac03019]
    96084206 (ACET3X_003884)
Messenger RNA biogenesis [BR:adac03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     96084206 (ACET3X_003884)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_Vps41 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_SPT8 DUF7165 WD40_RFWD3 eIF2A WDR54
Other DBs
NCBI-GeneID: 96084206
NCBI-ProteinID: XP_069307862
LinkDB
Position
3:complement(join(694026..694209,694265..694545,694608..694780,694859..695171,695219..695221))
AA seq 317 aa
MSKQYLTLHTVDSAHPKTSDVFAVAPTSTQLLSASGSSSINVYDTTQAEFPVIQTLDKAH
PLGIHHLVTAREEKARRAASAGFEGKVKIWSQDEDGVWSEDGEIVDQNKPGEIWAIALSA
DGQYLASTSINGKINVWSLNKEEGMPRIREYETKGSFGLCVDLSRNGTFTASGHENGSIY
VFNNETGRLAHSLAGLVHPVRSVAFSPASKLLAAGGDARIIALYDVTSGEQVANFTGHGG
WVLSLDWSDTGEYLLSGSHDSKAKVWRIETRSCVATHSHGDKPLWSVKWLPKSPTKSEMF
ALAGGNNSISFYREAAG
NT seq 954 nt   +upstreamnt  +downstreamnt
atgtcgaaacaatacctcaccctccataccgtcgactcggcgcatccaaaaacgagcgat
gtcttcgccgtggcaccgaccagcacacaattgctctcggcttccggctcaagtagcatc
aacgtttacgacacgacacaggccgagtttccagtaatacaaacactcgacaaggcgcat
ccactcggcatacaccacctcgtgacggcacgcgaagaaaaggcacgacgagctgcaagc
gcaggcttcgaaggcaaggtcaagatatggagtcaggacgaggatggcgtctggagtgag
gacggagagattgttgaccagaacaagccaggtgagatatgggcgattgccctaagtgca
gatggtcagtacctagcgagcaccagcataaatggtaagatcaacgtctggagcctgaac
aaggaagagggcatgccccggatacgcgagtatgagacgaaaggcagctttgggctctgt
gtagatctgagtcgcaacggtaccttcacagcctccggccatgagaacggatcgatatac
gtcttcaataacgaaaccggtcgcctcgcacactccttagctggtctcgtacacccagtc
cggagcgtagccttctccccagcatcaaagctcctagctgcgggaggcgacgctcgaatc
atcgcactctacgacgtcacatcaggcgagcaagtcgcaaacttcaccgggcatggcggc
tgggtactcagtctggactggagcgacacgggcgaatatcttctatcaggatcccacgac
tcaaaggcaaaagtatggcgcatagaaacacggtcgtgcgttgccacacattctcacgga
gacaaacctctctggagcgtaaagtggctgcccaagtcaccgacaaagagtgagatgttc
gcgctggctggaggaaacaactcgattagcttctaccgtgaggcagcaggttga

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