KEGG   Alternaria dauci: 96084480
Entry
96084480          CDS       T10615                                 
Symbol
ACET3X_004158
Name
(RefSeq) hypothetical protein
  KO
K03679  exosome complex component RRP4
Organism
adac  Alternaria dauci
Pathway
adac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:adac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    96084480 (ACET3X_004158)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adac03019]
    96084480 (ACET3X_004158)
Messenger RNA biogenesis [BR:adac03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     96084480 (ACET3X_004158)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     96084480 (ACET3X_004158)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1 Rrp40_N
Other DBs
NCBI-GeneID: 96084480
NCBI-ProteinID: XP_069308136
LinkDB
Position
3:1518127..1519164
AA seq 345 aa
MTISILPPSAPLPPRRDARDDSDDSDVDMEDDDLVTSDSKAIVTPGEAITSDPQWMRGHG
TYIPSIPPSSTTIISTVAGTLHKTNKLLSVQPLRARYQPEIGDLVVGRIVTVGTKKWNVD
IAAPMHANLPLSSINLPGGVLRRRTTVDELNIRTFFQEGDLLVAEVQSLHQDGTASLHTR
SLKYGKLRNGLFTSLSGAGGGILSRKGGVVRSRRQVFTLNTAAGEIDIVLGVNGYIFISK
HITTNADPKEMGINRLDESVTETLYSSQNDDIEPPVMREITRVSTLIRGLVACGAKVDEA
TIVKVYEGAVELEAEEQTLGSVERGIGAKGVVEAVLGRLEVEAAG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgacaatctctatcctcccacctagcgcaccgctgccaccacggcgcgatgcgagagac
gactcggacgactcagacgtggacatggaggacgacgacctcgtgacttccgactcaaag
gcgatagtaacacccggcgaggccataacttcggacccgcaatggatgcgcggccacggc
acctacatcccatccatacctccctcttccacaaccattatatctaccgttgccggtact
ctgcacaagacgaacaagctgctttccgtgcaaccgctgcgcgcccggtaccaacccgag
attggtgacttggtcgtgggacgcatcgtgacggtgggaacaaagaagtggaacgtggac
attgcagcaccaatgcacgcaaacctgcctttgtctagtataaacctgcccggtggagtg
ctgcggcgaaggacaactgtagacgaactgaatatccggaccttcttccaagaaggcgat
ctgctcgttgccgaagtacagagtctgcaccaggacggcaccgcctccctccacacgcga
tcgctcaagtacgggaaactacgcaatggtctgtttactagcctgagtggcgctggtggt
ggcatactgagtcgcaagggtggcgttgtgaggagcagacggcaggtgtttacgctgaac
acggcggccggcgagatcgacatcgtacttggtgtaaacggttacatcttcatcagcaag
cacatcacaaccaatgctgacccaaaggagatgggcatcaaccgactcgacgagagcgta
accgagacactgtattcgagccaaaatgacgacatcgagccgccagtcatgcgggagata
acgagggtcagcacgttgatcaggggattagtagcatgtggcgccaaagtggacgaggcc
accattgtcaaggtctacgagggcgcggtcgaacttgaagctgaggaacagactcttggt
agtgtggagaggggcattggcgcaaagggcgttgtagaagctgtgctcggacgactcgag
gttgaagctgccggctga

DBGET integrated database retrieval system