Alternaria dauci: 96084480
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Entry
96084480 CDS
T10615
Symbol
ACET3X_004158
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
adac Alternaria dauci
Pathway
adac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
96084480 (ACET3X_004158)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96084480 (ACET3X_004158)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
96084480 (ACET3X_004158)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
96084480 (ACET3X_004158)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
Rrp40_N
Motif
Other DBs
NCBI-GeneID:
96084480
NCBI-ProteinID:
XP_069308136
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Position
3:1518127..1519164
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AA seq
345 aa
AA seq
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MTISILPPSAPLPPRRDARDDSDDSDVDMEDDDLVTSDSKAIVTPGEAITSDPQWMRGHG
TYIPSIPPSSTTIISTVAGTLHKTNKLLSVQPLRARYQPEIGDLVVGRIVTVGTKKWNVD
IAAPMHANLPLSSINLPGGVLRRRTTVDELNIRTFFQEGDLLVAEVQSLHQDGTASLHTR
SLKYGKLRNGLFTSLSGAGGGILSRKGGVVRSRRQVFTLNTAAGEIDIVLGVNGYIFISK
HITTNADPKEMGINRLDESVTETLYSSQNDDIEPPVMREITRVSTLIRGLVACGAKVDEA
TIVKVYEGAVELEAEEQTLGSVERGIGAKGVVEAVLGRLEVEAAG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacaatctctatcctcccacctagcgcaccgctgccaccacggcgcgatgcgagagac
gactcggacgactcagacgtggacatggaggacgacgacctcgtgacttccgactcaaag
gcgatagtaacacccggcgaggccataacttcggacccgcaatggatgcgcggccacggc
acctacatcccatccatacctccctcttccacaaccattatatctaccgttgccggtact
ctgcacaagacgaacaagctgctttccgtgcaaccgctgcgcgcccggtaccaacccgag
attggtgacttggtcgtgggacgcatcgtgacggtgggaacaaagaagtggaacgtggac
attgcagcaccaatgcacgcaaacctgcctttgtctagtataaacctgcccggtggagtg
ctgcggcgaaggacaactgtagacgaactgaatatccggaccttcttccaagaaggcgat
ctgctcgttgccgaagtacagagtctgcaccaggacggcaccgcctccctccacacgcga
tcgctcaagtacgggaaactacgcaatggtctgtttactagcctgagtggcgctggtggt
ggcatactgagtcgcaagggtggcgttgtgaggagcagacggcaggtgtttacgctgaac
acggcggccggcgagatcgacatcgtacttggtgtaaacggttacatcttcatcagcaag
cacatcacaaccaatgctgacccaaaggagatgggcatcaaccgactcgacgagagcgta
accgagacactgtattcgagccaaaatgacgacatcgagccgccagtcatgcgggagata
acgagggtcagcacgttgatcaggggattagtagcatgtggcgccaaagtggacgaggcc
accattgtcaaggtctacgagggcgcggtcgaacttgaagctgaggaacagactcttggt
agtgtggagaggggcattggcgcaaagggcgttgtagaagctgtgctcggacgactcgag
gttgaagctgccggctga
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integrated database retrieval system