Alternaria dauci: 96084600
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Entry
96084600 CDS
T10615
Symbol
ACET3X_004278
Name
(RefSeq) hypothetical protein
KO
K14848
ribosome assembly protein RRB1
Organism
adac Alternaria dauci
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adac03009
]
96084600 (ACET3X_004278)
Ribosome biogenesis [BR:
adac03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
96084600 (ACET3X_004278)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
CAF1C_H4-bd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
MIOS_WD40
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
PDS5
WDR90_beta-prop_4th
UL41A
Motif
Other DBs
NCBI-GeneID:
96084600
NCBI-ProteinID:
XP_069308256
LinkDB
All DBs
Position
3:complement(join(1880477..1881762,1881812..1882010))
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AA seq
494 aa
AA seq
DB search
MAKRPADAEQEHEAIKNGERPMEIDQHNDVGDFEDEFEDEFESEDEILEAGVDGRPDEER
EAEERESGMDVDQDTFIPGRHKLSPGETLNPDLSTYEMLHALEAPWPCLSCDIVPDNLGA
DRKTYPATVYSVAGTQAARGRDKENQIMVMKMSSLSRMEKDDEDDDDDDESDDEASDPIL
ETKSIPLTSCTNRIRAHQTPQATSAQPPTTLTAAMTESGQVLIHDVTPHLTAFDTPGTTI
SPTQNKPVCTVRAHGSNEGYALDWSPIIPEGKLLTGDCTGKIFATTRTQGGGFVTDTTPY
TGHSGSVEELQWSPTEKHVFSSASSDGTVKIWDARSKSRKPVLSVQASKTDVNVLSWSHQ
TAHLLATGADDGEWAVWDLRQWKPSTDMSNAKKPSPVASYTFHKEQITCVEWHPTDDSIV
LVCAGDNTLTLWDLAVELDDEESRYTAGVQDVPPQLLFVHYMEQIKEAHWHPQIPGAIMA
TGGSGFNVFKTISV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgaccggcagacgcggagcaggagcacgaggcaatcaaaaatggagagcgt
cccatggaaattgaccagcacaacgacgtgggcgactttgaggacgaattcgaggatgag
tttgagagcgaggacgagattctagaggccggcgtagacggacgtccggacgaggagcgc
gaagccgaagagcgcgagagtggtatggatgtggaccaagataccttcattcctggtcga
cacaaactctcaccaggcgagactctgaatcccgatctttccacatatgagatgctccat
gcgctcgaagcgccatggccctgtctatcatgcgacatcgtacccgacaatctgggcgca
gaccgcaaaacataccccgcaaccgtctactcggtcgctggcacacaggcagcgcgagga
agggacaaggagaaccagatcatggtcatgaagatgagcagcctgtcacgcatggagaag
gacgacgaagacgacgacgacgacgacgaatcagacgacgaggcgtcagatcccatcctc
gagaccaagtcgatacccttgacgagctgcaccaaccgcatacgcgcccaccaaacacca
caagccacatccgcacagcctcctaccacccttactgctgccatgacagagtcaggacag
gttctgatccacgacgtaactccccacctcacggcctttgatacccccggtactaccatc
tcgcccacacaaaacaagcctgtctgcacagttcgcgcccatggatccaacgaaggttat
gcgctagattggtcgccaatcataccagagggcaagctcctgacgggtgactgtactgga
aagatctttgcgacaacacggacacagggtggaggctttgtcacagacaccacaccctat
accggccatagcggctcagtggaggagcttcagtggtcgccgactgagaagcacgtcttc
tcctctgcatccagcgatggcacagtcaagatctgggacgcgcggtcaaagtcacggaag
cccgtactcagcgtgcaagcctcaaagacagacgtcaacgtgctgagttggtcgcatcaa
accgcacatcttctcgctaccggtgcagacgatggcgagtgggcagtctgggacctgcgc
caatggaagccctctacagacatgtcaaacgccaagaagccttcgccagtcgcatcttac
actttccacaaggagcaaatcacttgcgtcgagtggcatcctacagacgacagtattgtg
cttgtttgcgccggcgacaacaccctcactctgtgggatctggctgtcgagcttgacgac
gaagagagcaggtacacagcaggcgtgcaagacgtaccaccgcaactgctgttcgtccac
tacatggagcaaatcaaggaggcgcattggcacccgcaaatcccgggcgccatcatggcc
actggaggatctggattcaacgtcttcaaaacaatcagtgtatga
DBGET
integrated database retrieval system
