Alternaria dauci: 96085217
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Entry
96085217 CDS
T10615
Symbol
ACET3X_004895
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
adac Alternaria dauci
Pathway
adac03250
Viral life cycle - HIV-1
Brite
Transcription machinery [BR:
adac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
96085217 (ACET3X_004895)
RNA polymerase I system
96085217 (ACET3X_004895)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
96085217 (ACET3X_004895)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
96085217
NCBI-ProteinID:
XP_069306939
LinkDB
All DBs
Position
4:join(908243..908503,908558..910032,910081..911392)
Genome browser
AA seq
1015 aa
AA seq
DB search
MASYGSDPEEEEEDFNPAPEIDEDDVAPTNKASRRPADEDEEDEVDAPNRMGNDDEDEEG
GGIDVDDDDDDDDDDDDEEDEDDEDVVARPAKRRKKAKRNMFIDVEAEVDEDEEEEEEGD
DEGVDEVHPDDLLEPTGADLDDRHHRELDMRREVNAQKDVEELAKEFDEKYRRREMQSAR
RGGAGAVPLALPTVDDPSIWGCKCRPGKEREIVMAIQKRLDEKMRAGQPVQVYSAFERGP
TGPQSGFLYVEADSKQAVVELIEGIQNVFMGSGQFSIPPKERPDLLRKKKRAPLEVGKFV
RMLRPPTYKGDLAKVVEVSTNGLDCVVQLVPRLDYGLNDDANAAVDNKRKRGFFGRQTER
PPAKLFNEAEAKKRHMKHLSMTGSGNQRAYTYKGEDYQNGFLIKEVKVNWVSTEKVNPRM
EELQFFAIQNADGTETMDLLAVQAAQKAADSGSAFAAGDNVEIYTGEQKGIRGTTVTVIG
DILTLRVSEGDLRGRRIDAPVKTLRKLFRDGDHVKVIGGSKYVDEVGLVTRIKDDKITLL
CDSTQQEITVFSKDLKRAADSANVGADSNFDLYDFVQIDASTIGCVVRVDREVLRIVDQQ
GDVRTLLHTQVSQIVGRNKHAVATDRDGSEIRHEDDVKEYGGEGRQGKVLYIHRGTLFVR
NRELVENQGIFVVRSNNVVTMAAKSGRAQAQGPDLSGINPALNAGANGNASAMPPPRASF
GRDKLIGKTVVIRKGAYKGLLGIVKDTMNDEARIELHTKNKQISVKKELLTIKDPITGQS
VEIGGKFPNRSRGGYSGGQTSYGGAGSGGRTPGWGNAGSGGRTPGWGGGGGGRTPGWGGG
AAAGGRTPGWGGDGGRTAYGGGDGSRTAYGGGDGSRTAYGGATAYGGATSYGGATAYGGN
DGNRTAHGGFNSGGRTPGWGGSGGNTTSKSGGLSAPTPGAYNAPTPGAYAAPTPGGYGAY
SAPTPGGPPMDAPTPGNYAAPTPGDTSGGRYGLAAPTPGAWDAATPAPSGDPGYD
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttacggcagcgatcccgaggaggaggaagaggacttcaacccggcacctgaa
atcgacgaagatgacgtcgcgccaaccaacaaggcctcacgcaggccggccgacgaagac
gaagaggacgaagtcgatgcgccaaacaggatgggcaatgacgacgaagacgaagagggt
ggcggcatagacgtcgacgatgacgacgacgacgacgatgacgacgatgacgaagaagat
gaagacgacgaggatgttgtcgcccgacccgccaagcggagaaagaaggcgaagcgaaac
atgttcattgatgtcgaagccgaagtcgacgaggacgaagaagaagaggaagaaggcgac
gacgagggtgttgatgaagtccaccccgacgatctcctcgagcccacgggcgccgatctc
gacgaccgacaccatcgcgaacttgacatgcgccgcgaagtcaacgcacaaaaggatgtc
gaggaacttgccaaggagttcgacgagaaatacaggcggcgtgaaatgcagagcgctcgt
cgcggtggtgctggtgccgtccccttggccctgcccacagtcgacgacccgtccatctgg
ggttgcaagtgccgtcctggaaaggagcgcgagattgtcatggccatccaaaagcgcctt
gacgagaagatgcgcgcgggccagccagtgcaggtttactctgcttttgagcgaggccct
acaggacctcagtctggtttcctctacgtcgaagccgactcgaagcaagctgttgttgag
ctgattgagggcatccaaaacgtcttcatgggctctggccagttctccattcccccgaaa
gagcgtccagatctgctccgcaagaagaagcgcgcgccattggaagtcggcaagtttgtg
cgcatgctgcgaccccccacatacaagggcgatctcgcaaaggtcgtcgaggtctccacc
aacgggcttgactgtgtcgtacaactcgtaccacgtctagactacggcctcaacgacgat
gccaacgccgctgtcgacaacaagcgcaagcgcggtttctttggccgacagactgagcgt
ccacctgcgaaactcttcaacgaagccgaagcgaagaagcgacacatgaagcatctcagc
atgactggatctggcaaccaaagggcatacacatacaagggcgaggactaccagaacggc
ttcctgatcaaggaagtcaaggtcaactgggtcagcactgaaaaggtcaaccccaggatg
gaggagttgcagttcttcgcaattcagaatgccgatggtacagagaccatggatcttttg
gccgtccaggctgcgcaaaaggctgcagactctggctccgcctttgctgcaggagacaac
gttgagatctacaccggtgaacagaagggtatccgcggtaccactgttaccgtaattggt
gacattctcacactccgcgtcagcgaaggcgatctcagaggcaggcggattgatgctcct
gtcaagactctacggaagctgttccgagacggtgaccacgtaaaggtcattggtggcagc
aagtacgtcgacgaagtcggtctagtcacaaggatcaaggacgataagattaccttgctt
tgtgactctacccagcaggaaattactgtctttagcaaagacctcaagcgcgctgctgat
tcggcaaacgtcggcgctgactccaactttgatctctacgacttcgtacagattgatgcc
tccaccatcggttgcgttgtccgtgtcgaccgggaagtcctacgaatcgtcgatcaacag
ggtgatgttcgcacactcctccatacacaggtttcgcaaatcgtcgggagaaacaagcat
gctgtagcaaccgaccgcgacggttccgagatccgacacgaggatgatgttaaggaatac
ggaggcgagggccgtcaaggcaaggttctatacatccaccgaggcacactcttcgtccga
aaccgcgaactagtcgagaaccagggtatattcgtggttcgaagcaacaacgtcgttacg
atggcagcaaagagtggtcgcgctcaagcgcaaggcccagatctcagtggcatcaaccct
gctctgaatgctggagcaaacggcaatgcgagcgctatgcctccaccccgcgcatctttc
ggccgtgataagctcattggcaagacggtcgtcatccggaagggtgcctacaagggtctt
ttgggcattgtcaaggataccatgaacgacgaagcccgcattgaattacacaccaagaac
aagcagatctcagtaaagaaggagcttctcaccatcaaggatcccattactggccaaagc
gtggagatcggaggcaagttccccaaccgctcgcgtggaggttactcgggcggccagaca
agctacggcggtgctggctctggtggacgaacacccggctggggcaacgctggtagcggc
ggccgtacgcctggctggggaggcggcggtggcggtcgcacacctggatggggaggcggc
gctgcagctggaggccgcacacctggttggggaggtgacggcggacgcacagcctatggt
ggaggtgatggatcacggactgcttatggtggcggtgatggctctcgaacggcttacggc
ggcgcaactgcctacggaggcgctacatcttacggtggagcgacagcttatggcggcaat
gacgggaaccgtaccgcccatggtggtttcaactctggtggtcgcacacccggttggggt
ggatcgggaggaaataccacttcgaaatctggtggtctctctgcgcctacgcctggcgcc
tataacgccccgacacctggtgcttacgcagcacctacccctggtggctatggcgcgtac
tctgcccctacgccgggaggacctcccatggatgctcctacgcctggcaattacgctgcg
cctacacctggcgacacgtcgggtgggcgatacggtctcgcggcgcctacaccaggcgcg
tgggatgctgcgacgccagcacctagtggcgaccctggatacgactag
DBGET
integrated database retrieval system
