KEGG   Alternaria dauci: 96085651
Entry
96085651          CDS       T10615                                 
Symbol
ACET3X_005329
Name
(RefSeq) hypothetical protein
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
adac  Alternaria dauci
Pathway
adac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    96085651 (ACET3X_005329)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:adac03041]
    96085651 (ACET3X_005329)
Spliceosome [BR:adac03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    96085651 (ACET3X_005329)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    96085651 (ACET3X_005329)
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 96085651
NCBI-ProteinID: XP_069307373
LinkDB
Position
4:complement(join(2347908..2347924,2348308..2349109))
AA seq 272 aa
MSKPQFDRADASALLDDRGYRGALIRGQNPALLFEKGVRERITESYYWKEQCFGLNAATL
CDRAADLKFIGGTTGITGKPTPFLCLAFKMLQLVPDKEIILEYLNFRGDEDDEEQSAEVK
KEDEDGHTSEDQDATKKALDLNAAGKLGDFKYLRCLAAFYIRLAWEPVEIYKTLEPLLTD
YRKIKRRLKDAFTLTYVDQFIDDLLTKDRICATSLWKLPSRANLEDLDMLEPRESPLGDE
IDELDDDLDRRSDGSARSYRSRSYQSRSDIFE
NT seq 819 nt   +upstreamnt  +downstreamnt
atgtcaaaaccccagttcgaccgcgcagacgccagcgcgctcctcgacgacagaggctat
cgcggagcgctcatcagagggcaaaaccctgcgctactcttcgaaaagggtgtgcgcgag
cgcatcaccgagtcatattactggaaagagcaatgttttggtctgaacgcggcgacgttg
tgcgaccgcgcggcagacctcaagttcatcggcggcacaacaggcattaccggcaagccc
acgccattcctgtgtctggccttcaagatgctgcaactggtgccagacaaggagattata
ctagagtacctgaacttccgcggcgatgaggacgacgaggaacaaagcgcagaggtcaag
aaggaggacgaggacggccacacatcagaagaccaagacgcaaccaagaaagccctcgac
ctgaacgcagcaggcaaactcggcgacttcaagtacctgcgctgcctcgccgccttctac
atccgcctcgcctgggagcccgtcgaaatctacaagaccctcgaacccctcctcaccgac
taccgcaagatcaagcgacgtctcaaagacgcctttacactcacatatgtcgaccaattt
atcgatgatctccttacaaaagaccggatatgcgcgacgagtctgtggaagttgccgtca
cgggccaacctggaggatttggatatgctggagccaagggagagtccgctgggcgatgag
atcgacgagctagatgacgatttggacagaagaagcgatggaagcgcaaggagttacagg
agtagaagctatcaaagtcggagtgacatctttgagtaa

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