Alternaria dauci: 96086288
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Entry
96086288 CDS
T10615
Symbol
ACET3X_005966
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
adac Alternaria dauci
Pathway
adac03013
Nucleocytoplasmic transport
adac03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
96086288 (ACET3X_005966)
mRNA cycle factors
P-body specific factors
96086288 (ACET3X_005966)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
96086288
NCBI-ProteinID:
XP_069306326
LinkDB
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Position
5:join(1446951..1446969,1447017..1447061,1447117..1450386,1450453..1450558,1450796..1450802)
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AA seq
1148 aa
AA seq
DB search
MERHRKRELRELNIRAWDGDQDIFAVQASLDSSMKKNTAFIKRLRTAVNAAAQAQFLQEI
RALSLHKYLSEIISACYEGLCKLKSPGEIAAGVEIVSALHQRFGPTEFTGYIGWYIGRGL
ATPDKSHLKTLAPEVREREEKERLARQRILLRVATELWLVGVLRSLDDVARPEEASKVKD
NGKLVEGSAKAKSRADNADAEPFPLEVLKDMLGHDREHVNLPLVVIFVKAFAWDILGAKP
SSAEGRRTVNEDGTTTSDKNGESSGAEDEEQDPPIISPDLQQRFRNILTRYFEDVKTHLV
RDQKHILSQGRKNAEAYVKSGEVFEDRQSNYEKQMKSQERLVTNAQILADALGVDMPDLK
EKDSSANTGDGAIGLVKAGEYLRGQSDGAGIWEDEEERRFYENLIDLKDRVPGILLEEVK
KKKTDGDEQVGKKIEAKPEAAEKEAPDATNDTKPADGEDQSTAIANKSVGAQVDALLARL
PELATKDAVDQTAMDFCFLNSKASRNRLIKAVQEIPKGRSDLLPLYSRLIATLGKYMPDV
SQGLVSYLDDEFRSLQRRKSKDFLGQVRTQNVRYLAELTKFGVVPEHVIFHCLKVSLDDF
SRMNIEIICNLLENCGRYLLRNPETSPRMHSFLETLQRKKGAQVIGQQERMLIENAVYYV
NPPERAAIEQKERTPVELFLRKIMYQDLTRRTLDKTIKQVRKMHWEEEEVVNLLHKVFAK
PGKIKYSNIHLLAVMLGTIHRFHQDFAISVIDDLLESITFGLELNDFKFNQRRISEVKYL
GELYIYRLVDSPLIFDTLYKLLNYGWEGGYARPGGYNPLDLSDDYFRIRLVCNLLETCGM
YYDKGAAKKKLDFFLTYLQYYVCIKEALPMDVEFIVQDAFNLVRPQWKIITNLEEASRAF
AEAVKQNYQTASADKPIEPDEDDMSASDDELDGPEDEDVVLPDGEGDKSSGDEDEDSDDD
EPMKQTSSDEEEEQIVVTRQEDERDPEADAEFDRELAKLMSESAESRKHDRKPVFDVPLP
MRRAREAPVNAEDIGTETPVPVAPVPSQTMKFSLLSKRGNRTQTRSIDLPSDSTFAVAMR
NKQQADTEERQRIKSLVLNYNEARDDADDTTGLDKTPNPYAQPRLDKAGANRSNQRARKL
QLSDVNWT
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcacaggaagcgcgagcttcgtgaattaaacatacgcgcatgggatggcgac
caagacatcttcgccgtgcaagcctccctcgattcgtccatgaaaaagaacacggccttc
atcaaacgcctgcgaaccgccgtaaacgcagccgctcaggcgcagttcctccaagaaatc
cgcgccctgtccctccataaatatctgtccgaaattatctccgcctgttacgaaggcctg
tgcaagctcaagtctcccggagagattgctgccggtgtggaaatcgtcagcgctctccac
caacgctttggcccgacagagttcacgggatacattggctggtacattgggaggggtcta
gccacaccggacaagtcgcacttgaagacactggcacccgaagtgcgcgagcgtgaagag
aaggagcgcctggcccgccagcgcattctgttacgagttgccaccgaactctggcttgtg
ggtgttctgcgcagcctggatgacgtagctagacctgaggaggcgagcaaggtcaaggac
aatggtaaactcgttgaaggctctgcgaaagcaaagtcgcgtgcggacaatgccgacgct
gagcctttcccgctcgaggttctgaaggacatgttgggacacgatcgcgaacatgtcaat
ctaccccttgttgtcatcttcgtcaaggcctttgcttgggacatactgggtgccaagcca
tcttctgcagagggtcgcaggactgtgaacgaagacgggactacaacttccgacaagaat
ggggagtcttctggcgctgaagacgaggagcaagacccgcccataatttcccccgatttg
caacagcgtttcaggaacattctcacccgttacttcgaagacgtcaagacgcacctcgtc
cgcgaccaaaagcacatactcagccagggccggaagaacgctgaagcgtacgtcaagtca
ggcgaggtcttcgaggatcgccagtccaactacgagaagcagatgaagtcccaagagcga
ttggtgacaaacgcgcagattctcgccgacgctttgggtgtggatatgccagacctcaaa
gagaaagacagttccgcaaacacgggcgatggcgctattggcctggtcaaggcgggcgaa
tatctgcgtggccaaagcgacggcgccggcatctgggaagacgaggaagaacgacgtttt
tacgaaaatctgattgacctgaaggatcgcgttccgggtattctacttgaagaagtcaag
aagaagaagacagatggtgacgagcaggttggcaagaagatcgaggcgaagcccgaggcc
gccgagaaggaggcaccagacgctacaaacgacacgaaaccggcagatggcgaagaccaa
tcgactgctatagcaaacaagtctgtcggagcccaggtcgatgccctattggcacgcctt
ccggaactggcaacaaaggacgctgttgaccagactgccatggacttttgcttcctaaac
tcgaaagcttcccgcaaccgcctcatcaaggctgtgcaagagatcccaaagggtcgatcc
gacctgctccctctgtactctaggctcattgcaaccctcggaaaatacatgccagacgtt
tctcagggactggtatcgtacctcgacgacgagttcagaagcttacagcggcgaaagtcg
aaagatttcctgggacaggtgcgaacacagaacgtacgctaccttgcagagctgaccaag
tttggcgtcgttcctgagcatgtcatcttccactgtctgaaagtcagccttgatgacttc
tcacgaatgaatatcgagatcatatgcaatctgttagagaattgcggacgttatctgctt
cgcaaccccgagacttctccccgtatgcattctttcctagaaacccttcaacgcaagaag
ggtgcccaggtgatcggtcaacaggagcgtatgttaatcgagaacgctgtgtactacgta
aacccgccagagcgtgcggcaatcgaacagaaagagcggacgccagtggagctcttcctg
cgcaagatcatgtaccaagacctgactcgtcgtacgctagacaaaaccatcaagcaggta
cgcaaaatgcactgggaggaagaagaggtagtgaatcttctccacaaagttttcgcaaag
ccggggaagatcaagtacagcaatatccacttgctagccgtcatgctggggacgatccat
cgattccatcaagactttgccatctcagttattgacgatcttctcgaatccatcacgttt
ggattagagttgaatgacttcaaattcaaccagcgccgaatttcagaagtcaaatacctt
ggcgaactgtacatctatcggttggtcgactcgcctctcatttttgacactctctacaag
ctcttgaattacggatgggaaggtgggtatgcgcggcccggaggatacaatcctctggat
ctttcagacgactacttccgtattcgcctcgtctgtaatctcttggaaacctgcggcatg
tattatgacaaaggcgcggcgaaaaagaagcttgacttctttctcacgtacctgcagtat
tacgtatgcatcaaggaggcattgccgatggatgtcgagtttatcgtgcaagacgctttc
aacctagtgagaccgcagtggaagataatcaccaacctggaggaggcttcgcgtgccttt
gcagaagccgtcaaacagaactaccaaacagcgtcagccgacaagcctatagagcccgac
gaggacgacatgtctgcatcggacgatgagttggatggtcccgaagacgaggacgtcgtg
ttgcccgatggcgaaggagacaagtcatctggcgatgaagatgaagattctgacgatgat
gagcctatgaaacaaacatcttcggacgaggaggaagagcagattgtggtcacacggcag
gaagatgaacgcgacccagaagctgatgctgagttcgaccgtgagcttgctaagcttatg
tcggaaagtgcagagtctcgcaagcatgaccggaaacctgtcttcgacgtgccgcttcca
atgcgtcgcgcccgcgaggctccggtgaacgccgaagacattggtaccgaaacacctgtt
ccagtcgcaccggttccgtcgcagacgatgaagttctcgctgctcagcaagcgtggcaac
agaacgcagactcgatctattgacctgccctctgactcaacctttgctgtcgctatgcgt
aacaagcagcaagcagacacagaagaacgacagcgaatcaagagcctcgttttgaactac
aacgaagctcgcgacgatgctgacgacacaactggtctggacaagactccgaacccgtac
gcgcagccgcgccttgataaagctggtgcaaatcgcagcaatcagcgtgcaaggaagcta
cagctatcagatgtcaattggacatga
DBGET
integrated database retrieval system
