Alternaria dauci: 96086310
Help
Entry
96086310 CDS
T10615
Symbol
ACET3X_005988
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
adac Alternaria dauci
Pathway
adac03030
DNA replication
adac03410
Base excision repair
adac03420
Nucleotide excision repair
adac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
96086310 (ACET3X_005988)
03410 Base excision repair
96086310 (ACET3X_005988)
03420 Nucleotide excision repair
96086310 (ACET3X_005988)
03430 Mismatch repair
96086310 (ACET3X_005988)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adac03032
]
96086310 (ACET3X_005988)
03036 Chromosome and associated proteins [BR:
adac03036
]
96086310 (ACET3X_005988)
03400 DNA repair and recombination proteins [BR:
adac03400
]
96086310 (ACET3X_005988)
DNA replication proteins [BR:
adac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
96086310 (ACET3X_005988)
DNA Replication Termination Factors
ELG1-RFC complex
96086310 (ACET3X_005988)
Chromosome and associated proteins [BR:
adac03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
96086310 (ACET3X_005988)
DNA repair and recombination proteins [BR:
adac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
96086310 (ACET3X_005988)
Check point factors
HRAD17(Rad24)-RFC complex
96086310 (ACET3X_005988)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Gp44_lid
Viral_helicase1
RCF1-5-like_lid
AAA_16
nSTAND3
RuvB_N
AAA_3
Rad17
Mg_chelatase
AAA_19
AAA_assoc_2
DNAX_ATPase_lid
AAA_11
MeaB
NTPase_1
AAA_24
NB-ARC
AAA_30
Motif
Other DBs
NCBI-GeneID:
96086310
NCBI-ProteinID:
XP_069306348
LinkDB
All DBs
Position
5:join(1525871..1525962,1526016..1526859,1526907..1527038)
Genome browser
AA seq
355 aa
AA seq
DB search
MSKAESSKAAASNGVKPNPNAAGGANYELPWVEKYRPVYLDDVVGNTETIERLKIIAKDG
NMPHMIISGMPGIGKTTSILCLARQLLGDAYKEAVLELNASDERGIDVVRNRIKGFAQKK
VTLPPGRQKLVILDEADSMTSGAQQALRRTMEIYSATTRFAFACNQSNKIIEPLQSRCAI
LRYARLTDAQVVRRIMQICEAEDVKYSDDGIAALVFSAEGDMRQAINNLQSTSAGFGFVN
GDNVFRVVDSPHPIKVQAMIKACHEQRIDDALASLKELWDLGYSCHDIISTMFKVTKTID
TLSEHAKLEFIKEIGFTHMRILEGVQTLLQLSGCVARLCKINMQPHLFALPTTSK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagccgaatcttccaaagcagctgccagcaatggtgtcaaaccaaaccccaat
gctgctggtggtgccaactacgagctgccatgggtagagaaataccgtcccgtctacctc
gacgatgtcgtcggcaacactgaaactatcgagcgcctcaagatcatcgccaaagacggc
aacatgccacacatgatcatctctggcatgcctggtatcggcaaaaccacgtccatcctc
tgtctcgcccgccaactcctcggtgatgcctacaaggaggctgttctcgaactcaacgcc
tctgacgaacgtggtatcgacgtcgtacgcaacagaataaagggcttcgcgcagaagaaa
gtcacacttccgccaggcaggcaaaagctcgtcattctcgacgaggcggatagcatgact
agtggtgcacagcaagctctgaggaggacaatggaaatctacagcgcaacaacacgattt
gcattcgcttgcaaccagtcgaacaagatcatcgagcccctgcagtcgagatgtgccata
ctccgatacgcgcgccttaccgatgcgcaagtcgtgcgccgcattatgcagatttgcgaa
gccgaggacgtgaaatactcagacgatggaatcgcggcactcgttttctcggccgaggga
gatatgcgacaagccatcaacaacctgcagtcgacatccgccggtttcggcttcgtaaac
ggcgacaatgtctttagagtggtcgacagcccgcatcccatcaaagtgcaagccatgatc
aaggcgtgccacgagcagcggatcgatgatgccctggcatcgttgaaagagctttgggat
ttgggatattcatgccacgatatcatcagcacaatgttcaaagttacaaagaccattgat
acactgagtgagcacgcgaaactggaattcatcaaggaaattggcttcacccacatgcgc
atcctcgaaggcgtgcaaacactcctacaactgtccggctgcgttgcgcgcttgtgcaag
atcaacatgcaaccccacttgttcgccctccccacgacatccaagtaa
DBGET
integrated database retrieval system
