Alternaria dauci: 96086314
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Entry
96086314 CDS
T10615
Symbol
ACET3X_005992
Name
(RefSeq) hypothetical protein
KO
K15560
protein NRD1
Organism
adac Alternaria dauci
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adac03021
]
96086314 (ACET3X_005992)
Transcription machinery [BR:
adac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
96086314 (ACET3X_005992)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrd1-Seb1_dom2
CID
RRM_1
Motif
Other DBs
NCBI-GeneID:
96086314
NCBI-ProteinID:
XP_069306352
LinkDB
All DBs
Position
5:complement(join(1534326..1534648,1534695..1534899,1534949..1535985,1536040..1536385,1536464..1536580))
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AA seq
675 aa
AA seq
DB search
MAAMDELGTQLQSLQALKPPGVTPTKIKAITQLCVDNIQSHSVIVQKIAQQLQNSVATHK
LGVLYVVDAVARQWVERAKQAGQTVSKHAAQGTYASGVQMMRDVLPAMMHNLIQSAPETQ
KEKISKLLDIWERGQTFPLDMLAGFKQQLNGGQNNVPAPSEPPKSNGLVPAFNGHTNQQP
PPPPPVAMPQPPQDPGALFAALAGVGQQNGQTNPPPAAASPFPFQQNMVPPPPPGFVPPP
PTGVIGQPNMPIPPAGTNEIVTQILKAMTAGSIPPDQAIQALNTLAMAQNGGMPMPPPAV
AQTPQVQPAVQNGNQGDRYDLNDTRMRDRSRSPDYQRRRSPVRSPPNPNRRESPTYGVYD
PNAGPEGNAQRFERGERGRGRGKQRGGRNDRNEYRQRSPPRRQPSPPRAAYGQSKYIEWD
ETLPREHIRVLSRTLFVGGAGGTESEIRSIFARFGRVQTCIVNQDKRHAFVKMLTRPDAV
AAKQGMDTLQDPAAQSKARQTRWGVGFGPRDCSDYTTGISVVPISRLTDADRKWALTAEN
GGTGGRPLEGGMVIEEPDIEIGAGVSSKAISRRVPTDVPRGGRGGFGNRGDFNARGDHGG
RGNPNGRNDFSDRADFGRNDFAGGCGGFDNNGPAKFRKQDHRAVNDPRHISPRPEQGVAV
PPAVPGFGFQLPGFS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatggacgaattaggcacgcaattgcagtcgctacaagccctcaagccgcct
ggtgtcacacccaccaagatcaaggctatcacgcagctgtgcgtagacaacatccagtcg
cattccgtaatcgttcaaaagatcgcccaacagcttcagaacagcgtcgccacacacaag
ctaggagtactatacgtcgtagatgcagtcgcccgtcaatgggtcgagagagctaagcag
gccggccagaccgtgtctaagcatgccgcccaaggaacatatgcttcaggagtgcagatg
atgcgagacgtgcttccagccatgatgcacaacttgattcagtccgcaccagagacacag
aaagagaagatctccaagctgctagacatatgggagcgcggccaaaccttcccgctcgac
atgctcgccggcttcaagcagcagctgaacggaggccagaataacgtgccagcaccctca
gagccgcctaagagcaacggcttagttccagccttcaatggccacactaaccaacagcca
ccgccaccaccacctgtagctatgcctcaacctccacaggacccaggtgctcttttcgcc
gcactggctggcgttggtcagcaaaatgggcaaactaaccccccacctgcagcagcctct
ccatttccttttcagcagaatatggtgccgcctccacctccagggtttgtgcctccgcca
cctactggagtaattgggcagcctaacatgcccattccgcctgctggtacgaatgagatc
gtgactcagattctaaaggctatgactgctggctctatcccacccgaccaggcaatacag
gcactgaatacattggctatggcccaaaatggcggaatgcctatgccgcctccggctgtt
gcacagactccacaggttcagcctgctgtacaaaacggtaaccagggagacagatatgat
ctgaacgatactagaatgcgagatcgtagcagatcgccagactatcagcgtcgacgatca
cctgtgagatctccacccaacccgaatcggcgggagagtccaacatatggtgtgtacgat
cccaatgcaggtcctgaaggcaatgcacaacgctttgagcgaggtgagcgcggtcgtggt
cgtggtaaacagcggggaggtcgtaatgatcgtaatgagtatcgccagcgttcgccgccg
cgacgacaaccgagtccacctagagcggcgtatggccagtcaaagtatatcgagtgggat
gaaactcttccgcgcgagcacatcagggttcttagtcgtacattattcgtaggtggtgct
ggtgggacggaaagtgagatccgaagcatatttgctcgttttggtagagtccaaacatgt
attgtcaaccaggataagcggcatgctttcgtcaagatgttgacccgcccggatgccgtc
gctgccaaacagggtatggacactctccaggatcccgctgcgcaatccaaggcgcgccag
acgagatggggtgtcggttttggtcctcgtgactgtagtgattacaccacgggcattagt
gttgttcctatttctcgtcttaccgatgctgatcgcaagtgggctttgaccgctgagaat
ggtggaacaggtggccggcctctagaaggaggcatggtaatcgaggagcctgacatcgag
atcggtgcgggtgtttcttcaaaagccatcagccgacgtgtaccgactgatgtccctcgt
ggtggtcgcggagggttcggtaaccgaggtgactttaatgcacgcggagaccatggcgga
cgtggtaatcccaacggacgaaatgacttcagcgaccgtgcagattttggacgcaacgat
tttgctggtgggtgtggtggtttcgacaacaacggtccggccaagttccgcaagcaagac
catcgtgccgtcaacgacccacgacacatttcgccccgacctgagcaaggagttgctgtc
ccacctgcagttcctggctttggattccagctgccagggttttcatga
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