Alternaria dauci: 96086361
Help
Entry
96086361 CDS
T10615
Symbol
ACET3X_006039
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
adac Alternaria dauci
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
adac01009
]
96086361 (ACET3X_006039)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96086361 (ACET3X_006039)
04131 Membrane trafficking [BR:
adac04131
]
96086361 (ACET3X_006039)
03036 Chromosome and associated proteins [BR:
adac03036
]
96086361 (ACET3X_006039)
Enzymes [BR:
adac01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
96086361 (ACET3X_006039)
Protein phosphatases and associated proteins [BR:
adac01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
96086361 (ACET3X_006039)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
96086361 (ACET3X_006039)
Membrane trafficking [BR:
adac04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
96086361 (ACET3X_006039)
Chromosome and associated proteins [BR:
adac03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
96086361 (ACET3X_006039)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Phage_H_T_join_2
Arb2
Motif
Other DBs
NCBI-GeneID:
96086361
NCBI-ProteinID:
XP_069306399
LinkDB
All DBs
Position
5:complement(join(1670336..1670542,1670666..1670781,1670833..1670912,1670961..1671052,1671101..1671193,1671244..1671355,1671404..1672433,1672481..1672691))
Genome browser
AA seq
646 aa
AA seq
DB search
MNLIDDIHPEDPRRIHSIYEELREAGLVATSDADEEQEDKCWRIMTRFATRPEILLIHTP
EHYAFVESLQHMTAETLKLEAENRDSIYFNHATYDCAKLAAGGAIEACKAVVQGTVRNAI
AIIRPPGHHAETNQPSGFCIFNNVPIATRVCQNDYPETCRKVLILDWDVHHGNGVQHAFY
DDPNVLYISLHVYKDGNFYPNLKDGNFDYCGEGLGEGKNVNIPWAEHGMGDSEYLYAFQE
IVMPIATEFDPDLVIVSAGFDAAEGDLLGGCFVTPACYGHMTHMLMRLAKGKIVVCLEGG
YNLRSIARSALAVTRVLMLEPPDRLSDELSAPKDSAVYVVENVKRQHSKYWKSLYPKHLD
KTDPGYKDTIRLHEVIREWQSKRLASEHAMVPLPALQINKAGLAQTFEHNIIATPNFMER
HPLLVIFHDPPSFHDHSDPVTGKRELHNTWLTDVTKRYIDWAINNDFQVIDVNIPKVVTV
EDSIIGYMRSEDSAVRAQQTRELAAYLWENYIEPNDATQVFFMGIGDAYLGLVDLLSHNE
NCTDADSAVECLIGFVGETTIQSIKRATDDTISSWYYSHSMIFVKNSHFVWNPSRQRKMR
KKLGHLIQSPKDSLDDMLEHHLEDVQNLLLEKKGKVASMMTAQTSS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatcgatgatattcatcccgaggacccgcgtcgcattcactccatctacgaa
gaacttcgggaagctggtctggttgcgaccagcgatgcagatgaagaacaagaggacaag
tgttggagaataatgactcgctttgctacgagaccggagatcctccttatacatacgccg
gagcattacgcattcgtagagtcattgcagcatatgactgcagagactttgaaactggaa
gctgaaaatcgtgactcgatctacttcaatcatgcgacttatgactgtgccaagctcgca
gctggtggtgctatcgaggcctgcaaagcggtagtgcaaggaactgtacgcaatgcaatc
gccatcattcgtcctccaggtcatcatgcggaaaccaatcagccttctgggttctgcatt
ttcaacaacgtcccaatagccacccgcgtatgtcagaatgattacccagagacctgtcgt
aaggtcttgatccttgactgggatgttcatcacggtaatggtgttcagcacgccttctac
gatgatccaaacgtgctctacatatctctgcatgtctacaaggacggaaacttctatccc
aacctgaaggatggcaatttcgactattgcggtgaaggtctcggcgaaggaaagaacgta
aacattccgtgggctgaacacggcatgggtgattcggagtacctatatgcttttcaagaa
atcgtcatgcctattgctactgagttcgatccagatcttgttatagtctcggctggtttc
gacgcggctgaaggagatctactaggtggttgtttcgtcaccccagcgtgttacggtcac
atgacgcacatgcttatgcgacttgcgaaagggaagattgtagtatgtcttgaaggcggt
tacaatctgagatcaatagcgcgctcagcgctcgcagtaacaagagtgctcatgctggag
cctccggatcgcttgagcgacgaactctctgccccaaaagacagtgcagtctacgttgtc
gagaacgtgaaacgtcagcattcaaagtattggaaatcgctctatcccaaacatctggac
aaaacagaccctggatacaaagatacaattcgattgcatgaggttatccgagaatggcag
agcaaacgactggcttcagagcacgcgatggttccgcttcctgcactgcagataaacaag
gcaggtctagcgcaaaccttcgagcacaatattatcgctacaccaaactttatggaacga
catcctcttctcgtgatctttcacgatccgccgagcttccacgaccattctgatccagtt
actggtaagagagaattacacaacacatggcttactgatgttacgaagaggtatattgac
tgggccatcaacaatgacttccaggtcattgatgtcaatatcccgaaagtcgttacagtt
gaagactccatcatcggctatatgagatccgaagattctgcagttcgagcacagcaaacc
cgcgaacttgcagcgtatctgtgggagaattacatcgaaccaaatgatgcgacacaagtg
tttttcatgggtatcggagatgcatatcttggtctggtcgacctactgagtcacaatgaa
aactgtaccgatgctgatagcgcggttgagtgcttaatcggcttcgtcggagaaacgacc
attcagtcgataaagcgagccacagatgacaccatatcaagctggtactactcacattcc
atgatctttgtgaagaatagtcacttcgtctggaacccgagtcgccaacgtaagatgcgc
aagaagcttggccatcttatccaatcacccaaggatagtttggatgacatgcttgagcac
catttggaggacgtccagaatttgcttttggaaaagaagggtaaagtagcctctatgatg
acagctcaaacatctagctaa
DBGET
integrated database retrieval system
