Alternaria dauci: 96086762
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Entry
96086762 CDS
T10615
Symbol
ACET3X_006440
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
adac Alternaria dauci
Pathway
adac03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
adac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
96086762 (ACET3X_006440)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
96086762 (ACET3X_006440)
U7-dependent histone pre-mRNA processing factors
96086762 (ACET3X_006440)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
96086762
NCBI-ProteinID:
XP_069305208
LinkDB
All DBs
Position
6:complement(join(271972..273087,273182..273536,273586..273789,273838..273968,274020..274182,274294..274616))
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AA seq
763 aa
AA seq
DB search
MSSQTIQQMESARSLALGDGRYYPTIIPGVLPIIGYSEDQSIEIQRWGADFLAEAFASPT
WPQEVKQQSAPSVLPTLKAYLENVEDKSVIKSAIQAAASVYPLVYKHIVSDPSDAQKWQL
MAGIKTNILRRMDTAAPGVRICCVKFLQQVVLVQTPGVADPRRADHNDISLSLVPRDHPL
IPYASLEAEGHGLLDRLLDIIHGDHSDGLLVTATLNSLGMLIHRRPNAANKILNSVFNFN
PLKLANAPMTPKNKVIMKSIERTTRALLVNIIKRNPENPVNGRIQQFLERMHRTRVEAFD
ESNRKRPAPSEPTDGLDQAKRQRLVAEPPSRTPSVQPLPPGEVSWRQLYTLNAEGSTANF
DVQNFRDPEQLLRIVVPVLQSVNPQKLEQAISAVRARYQTLKQTAAAQPAQPAAAEDEEE
YEPDFEPEDAEQLINKLDGIPSNPFPSYGGPSSALAPYKLPEAPPLSAQDVQKYGDMTVH
RAFGMLSSVDETQKSKVAKGGFNRLAATDYNRDAWVTILSRLATRASVGLDDPEDGIKDE
YAVKSAKGSLRISDMVRDGLYQYILYNWKSRIDVAISWLNEEWYNDMVLAQAGEEDGDSA
TATNGHNYPSTKSSSGNYHRCILRLLDGILPYIEHTDKIIIRFLSEIPQIDKDILARLKK
MAEDPERIDLACSCLHYLYMFRPPVRKLVVDVLAEMWSENERAKPSARKLLVRWRPEVLK
EEEGGEQQQQQQQKGVSLPTLVKGESGVGKESANGALEVKAVS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacagacgatccagcagatggagtcggcccggtcgctcgcgttaggcgacggt
agatactatcctaccatcataccgggcgtgcttcccatcatcggctacagtgaagaccag
agcatcgagatacagcgctggggcgccgacttcctagccgaggcatttgcatcgccgaca
tggccccaggaggtcaagcagcagagcgcgccctctgtcttgcccaccctcaaggcgtac
ctcgagaatgttgaagacaagagcgtcatcaagagcgccatccaggcggccgcgagcgtg
tacccgctcgtctacaaacacattgtctccgaccccagcgatgcgcagaagtggcagctc
atggccggcatcaagaccaacatcctgcgccgaatggacacagccgcgccaggtgtgcgc
atatgttgcgtcaagttcctccagcaagtcgtcctagtccagacaccaggcgtggcagac
ccaaggcgcgccgaccacaacgacatctccctgtctctcgtaccccgcgaccaccccctc
ataccatacgcgagcctcgaggctgaaggacatggactgctggacaggttgttggatatc
atacacggagaccacagtgacggcttgctcgtgactgcaaccctcaacagcttgggcatg
cttattcaccgcagacccaatgctgcaaataagatcttgaacagtgtcttcaacttcaac
cctctgaagcttgccaacgcgcccatgacgcccaagaacaaggtcatcatgaagtcgatt
gagcgcacaacaagggcactgcttgtgaacatcataaagaggaatcccgaaaaccccgtc
aacggacggatacagcagttcttggaacgcatgcatcgcacacgggtggaagcctttgat
gaatcgaatcgcaagcgacctgcacccagtgagccaacagatggtcttgaccaagcaaag
aggcaacggttggtcgctgaacctccgagtcgcacgccatctgttcagccgctaccgcct
ggcgaagtgagctggcggcaactgtacacattgaatgctgaaggcagcactgcaaacttt
gatgtacaaaacttcagagatcctgagcaattgttaaggatagtggtgcctgttctgcag
tcggtgaacccgcaaaagctcgaacaagctatcagcgccgtccgcgcccgttatcaaaca
ctgaagcagaccgctgcagcccaacccgcacaacccgccgccgcagaagacgaagaggaa
tacgagcctgactttgaacctgaggatgctgagcagctcatcaacaagctcgacggcatt
ccttcaaacccctttccctcatacggcggaccatcgagcgctttggccccctacaaatta
cccgaggcacctccgttatcagcacaggatgttcagaagtacggtgacatgaccgtacat
cgagcgttcggcatgctgagcagtgtagatgagacgcaaaagagcaaggtcgcaaagggc
ggcttcaaccgcctcgccgccaccgactacaacagagatgcctgggtcactatactctcc
cgactcgctacacgagcaagtgtcggactagacgacccagaagatgggatcaaggacgag
tatgcggtgaaaagcgccaagggcagtctccgcatcagcgacatggtaagagacggtctg
taccaatacatactttacaactggaaatcccgcatcgacgtggccatctcctggctcaat
gaagaatggtacaacgacatggtcctcgcccaggctggcgaagaagacggagactccgcc
accgcaacaaatggtcacaactacccatctacaaagtcctcatccgggaactaccaccgc
tgcatactccgcctcctcgacggcatcctaccttacattgaacacaccgataagatcatc
atccgcttcctgtccgagataccgcaaatcgataaggatatcctcgcccgcctcaaaaag
atggcagaagaccctgagcgcatcgatctagcatgtagttgtctgcattacttgtacatg
tttcgcccgccagtgaggaagttggtggttgatgtgctcgcagagatgtggagcgagaat
gagagggcgaaaccgagtgcgaggaaattgttggttaggtggaggccggaggttttgaaa
gaggaggagggcggagaacaacagcagcaacagcagcagaagggcgtgagtttgccgacg
ctggtcaagggcgagagtggggtggggaaggagagtgcaaatggggcgttggaggttaag
gctgtttcttag
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integrated database retrieval system
