Alternaria dauci: 96086842
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Entry
96086842 CDS
T10615
Symbol
ACET3X_006520
Name
(RefSeq) hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
adac Alternaria dauci
Pathway
adac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
96086842 (ACET3X_006520)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96086842 (ACET3X_006520)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
96086842 (ACET3X_006520)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_26
PH
Motif
Other DBs
NCBI-GeneID:
96086842
NCBI-ProteinID:
XP_069305288
LinkDB
All DBs
Position
6:join(522815..522932,522984..523141,523187..525023,525088..525104)
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AA seq
709 aa
AA seq
DB search
MEVSQDTLPELQRIFMFLNSHSNKLYQEGYFLKFHDTDTRGRPAPDRRWQEYFVQLVGTI
LSLWDASALDRAGGETEVLPTFINLTDAAIHMIPSMTLKDGKKLDNILSVSTAASNKFLF
HFDSYHALTQWTAGIRLAMYEHTTLSEAYTGALIAGKGKTLNNIRMILDRQCAKYEDWVR
VRFGAGTPWRRCWCVVSPPDEKEYIKLQKLQKKGNAYERPPILKGDIKFYETKKVTKKTK
AIATVRDAYSCYAIYPQSKPLIDQSTLVKIEGKITVHSTPESTTEGFVFVMPESRPAISG
FEIMLQFLFPVFDTFSLYGRPKKLIADVLDTRGLMFAMPSDRRYGYLEMWDVVGLINTEG
SDKWSERQWRKQLKDLTSTRMTSVTQDAESVYSRASRRNTVSRAGFTPRGLRFEDQGSVR
SSPSTRQSSPTRKFPDFEVPKTRRAGTAPAVNPFGTPRHQRSVSEQVSGPNNQNSPSRFT
QDETPYEDERAPTPPQHRVLNSSSNGAVQPYDSASDYDESPVKEPQNLPPPPADLSAPPQ
GYVDLPPTQEHAANQKPPIRPNMPMAKPNPAVDSATLQQMADASHGSFPVGLAGAGAAAA
WRNQDTIQSRRSGDYNGYGDQGQAMYLGVNSRPPPSNQNSGNRLSTIPASPYVEHSEFVD
SPTGYQPTAPPVPEHSELPPQPPTHELPYRPHPESGGIPRKPVPVYEKT
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaagccaggacacactgccagagctgcagcgcatcttcatgttcctcaacagc
cattccaacaagctgtaccaagagggttacttcctcaagttccacgacaccgatacccgt
ggccgtcctgcgccagatcgaaggtggcaggagtactttgtccagcttgttggcaccatt
ctctcactatgggatgcgagtgcgctggaccgggccggtggcgagactgaagtcttgcca
acattcatcaacctgacagacgctgcgatccacatgatcccctccatgaccctaaaagac
ggaaagaagctcgacaacatcctcagcgtgtcgacagctgcgagcaacaaattcctcttc
cacttcgattcctaccacgcccttacgcagtggaccgctggcatccgcctcgccatgtac
gaacatacaactctctcggaagcatatacgggcgcattgattgctggcaagggcaagacg
ctcaacaacatccgcatgattctggatcgacagtgcgcaaagtacgaagactgggtacgc
gttcgatttggcgcaggcaccccatggcgccgctgctggtgtgtcgtctctccaccagac
gagaaggagtatatcaaattgcaaaagctacagaagaagggcaacgcttacgagcggcca
ccaatactcaagggcgacatcaagttctacgagaccaagaaggttaccaagaagacaaag
gccattgccactgtcagggacgcatactcgtgttacgccatctacccacaatcgaagccg
ctaattgaccagtccacgctggtcaagatcgagggcaagattacagtacactccacgcca
gaaagcacgacagaaggattcgtctttgtcatgccagagtcgcgtccggctatttcagga
tttgagattatgctccagtttctcttccctgtcttcgatacgttctcgctatacggacgc
ccaaaaaagctcatcgcggacgtgttggatacccgtggcttgatgttcgccatgccttcc
gacagacggtacggctacttggagatgtgggatgtcgtgggcttgatcaataccgagggc
agtgacaaatggtcagagcgccagtggaggaaacagttgaaggacctgacgtcgacacgt
atgacgtccgtaacccaggacgcagagtcggtctacagccgcgccagccgtaggaatacc
gtcagccgagcaggcttcacaccacgcggtctacgattcgaagaccagggttctgttcgc
tctagtccgtccacgcgccagtcgtcgcctacacgtaaatttccggactttgaagtgcca
aagacccgtcgtgccggaaccgctcccgcagtgaacccattcggtactccacgccatcag
cgatcggtatcggagcaagtcagcggacccaacaaccagaactcgccatctaggtttacg
caagacgaaacgccctacgaggacgaacgcgcgccgactcctccccaacaccgtgtgctc
aacagctcctcgaatggcgcagtccaaccgtacgattcggcgtccgactacgatgagagc
cctgtcaaggagccgcagaaccttccgccacctccggcagatttgtctgctccgccgcag
ggttatgttgaccttcctcctactcaggagcacgctgccaaccaaaagccgcctattcgc
cccaacatgcctatggcgaagccaaaccctgccgtcgattctgctacgctgcagcaaatg
gctgatgcctcacatggatcgttcccagttggcctagctggggcaggtgcagctgcagcc
tggagaaaccaggatactatacagagcaggcgcagtggcgactacaatggatacggtgat
caagggcaggccatgtatcttggtgtaaactcaaggccacccccatcgaaccaaaactct
ggtaaccgcctatctaccattcctgcatcgccctatgtcgagcactccgaattcgtcgat
tctccaacaggctatcagccgacagctccgccagttccagaacacagtgagttgccgccg
caaccccccacccacgagcttccttaccgcccacatcccgaaagtggcggtatacctcgt
aaacccgtaccagtttacgagaagacgtaa
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