Alternaria dauci: 96086974
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Entry
96086974 CDS
T10615
Symbol
ACET3X_006652
Name
(RefSeq) hypothetical protein
KO
K12828
splicing factor 3B subunit 1
Organism
adac Alternaria dauci
Pathway
adac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
96086974 (ACET3X_006652)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adac03041
]
96086974 (ACET3X_006652)
03036 Chromosome and associated proteins [BR:
adac03036
]
96086974 (ACET3X_006652)
Spliceosome [BR:
adac03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
96086974 (ACET3X_006652)
Complex B
96086974 (ACET3X_006652)
Complex C
U2 SnRNP specific factors
96086974 (ACET3X_006652)
Chromosome and associated proteins [BR:
adac03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
96086974 (ACET3X_006652)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT
HEAT_2
Htt_N-HEAT_1
HEAT_EF3_N
Cnd1
Vac14_Fab1_bd
XMAP215_CLASP_TOG
mTOR_dom
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
96086974
NCBI-ProteinID:
XP_069305420
LinkDB
All DBs
Position
6:complement(906785..910369)
Genome browser
AA seq
1194 aa
AA seq
DB search
MAGPRAGNSRANGAANGDTSNNKQSLNEPLDKELYGGSNGDYVSSIAVADDDNDMEDVQL
NGRSLVGQYTASKEMMNEFAHGDAGEADILDSREKQAQIASRETDYQRRRFDRALSPSRA
DPFAKDGEDGGQSYKDVMKQREFEREEARVKRLIEEKERSGGNEVLDHKPTLKDDDDSAP
VDGDKTPPMKKTRKRRRWDEAGDAETPAIKEEADGVKVESEPKKRSRWSPAPEDDKTEAA
QPTRSRWDTTAVAPASAATPAPAANGARPVAQTFAFGTDISNRNAPLSDEQLDMMLPGEA
EGYKVLEAPPGYEPVRRPVGMPALPTGYQGFLIPEADNSLAAMGKQLPTEIPGVGDLQFF
KNEDMKYFGKLTDGADENEMTVEELKERKIMRLLLKVKNGTPPMRKTALRQLTDNARQFG
AGALFNQILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDQDY
YARVEGREIISNLAKAAGLAHMISTMRPDLDHQDEYVRNTTARAFAVVASALGIPALLPF
LRAVCRSKKSWHARHTGVKIVQQIPILMGCAILPHLKGLVECIGENLNDEQPKVRMVTAL
ALAALAEAASPYGIESFDDILNPLWTGARRQRGKALASFLKAVGYVIPLMDEEYSNYYTS
QIMEIVIREFQSPDEEMKKVVLKVVSQCSNTAGVTPVYLKDNVLPEFFKHFWVRRMALDK
RNYRQVVDTTVDLAQKAGVAEIVGRIVNNMKDENEAYRKMTVETVDKVISTLGAHDVDQR
LEEQLIDGVLVAFQDQTIEEPIVIDGFATVVNALGERTKTYLPQIVATVLARLNNKSATV
RQQAADLISRITFVMQKCDEDPQLIKLAQALYEYLGEEYPEVLGSILGALRAIVTVVGLH
AMQPPIKDLLPRLTPILRNRHEKVQENTIDLVGRIADRGANYVNPREWMRICFELLDMLK
AHKKGIRRAANNTFGYIAKAIGPQDVLATLLGNLRVQERQSRVCTAVAIGIVAETCAPFT
VLPALMNEYRVPELNVQNGVLKSLSFMFEYIGEMAKDYVYAITPLLEDALIDRDQVHRQT
AASVVKHVALGCVGLDCEDAMIHLLNLLWPNLFETSPHVIDRIIEAIEGVRNAIGTPLVM
NYVWAGLFHPARKVRQPYWRIYNDAYVQNADAMVPAYPAFEEDEVRRHELDIFI
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggccgggccgcgcgcaggaaactcgagggccaacggcgccgccaacggggacacgtcg
aacaacaagcagtcgctcaacgagcccctcgataaggagctctacggcggaagcaatggc
gactacgtcagttccatcgccgttgctgacgacgacaacgacatggaggacgtgcaactg
aatggccggagccttgtcggacagtacacggcatccaaggagatgatgaacgaattcgcg
cacggcgacgctggagaggcggacatcctcgacagtcgcgagaagcaggctcagattgca
tcacgcgagaccgactaccaacgacggcgattcgaccgcgcactctcgccatcgcgagcg
gatccatttgccaaggatggcgaagacggcggccagtcgtacaaggacgtgatgaagcag
cgcgagtttgagcgcgaagaggcgcgtgtaaagaggttaatcgaggagaaggagaggtcg
ggcgggaacgaggtacttgaccacaagcctacgctcaaggacgacgacgactctgctccc
gtcgatggcgacaagactccacctatgaagaagactcgcaagaggagacggtgggacgag
gctggcgacgccgaaacccctgcgatcaaggaagaggccgacggtgtcaaggtcgagtct
gagcccaagaagcgatcgcgatggtcaccagcacccgaggacgacaagaccgaggccgct
cagccgacccgatcacgttgggataccactgcggtagcccctgccagcgccgcaacaccc
gcccccgctgcgaacggcgcccgcccagttgcgcagacattcgcattcggtaccgacatc
tcgaaccgcaacgctcccttgtccgatgagcagctcgacatgatgcttcctggtgaagcc
gaaggatacaaggtcctcgaggcgcctcccggatacgagccagtgcggcggccggtgggc
atgccagcacttccaacaggataccagggattcttgattccagaagcagacaacagcttg
gctgccatgggcaagcagctgcctacagagattcccggtgttggtgatctgcagttcttc
aagaacgaggacatgaaatactttggaaagctcacagacggtgcagacgaaaacgagatg
acagtggaggaactgaaagagcgcaagatcatgcggctgttgctcaaggtcaagaacgga
acaccgcctatgcgaaagacggcgcttcgacaacttacggacaacgcccgacagttcggt
gcaggagctctcttcaaccaaattctgccactactgatggagcgcacgctggaggatcag
gagcgccatttgcttgtcaaagtcatcgaccgtgttctctacaagctcgacgaccttgtt
cgaccctatgttcacaagatccttgtcgttattgagcctctccttatcgaccaggactac
tatgcacgtgtcgaaggtcgggagattatttccaaccttgcaaaggctgctggtctcgct
cacatgatcagtacaatgcgtcccgatctagatcaccaagacgaatacgtccggaacacc
accgctcgagcgttcgccgtcgtcgcatccgccttgggcatccccgctctcctccccttc
cttcgagctgtatgccgatccaaaaagtcatggcacgcgcgtcacactggtgtaaagatc
gttcagcagattcctatcttgatgggttgcgctattcttcctcatctcaagggactcgtg
gagtgcatcggtgagaatttgaacgacgaacagccaaaggttcgtatggtcacagctctt
gcgcttgcagccctggctgaagctgcgagcccgtacggtatcgagtccttcgacgacata
ttgaatcctctttggaccggagctcgtcgccaacgtggcaaggctcttgcatccttcttg
aaggctgtcggctatgttattccgctcatggacgaggagtactccaactattacacgagt
caaatcatggaaattgtcatccgcgagttccaatcgcccgatgaagagatgaagaaggtt
gtgctcaaggttgtttcccagtgctcaaacactgcaggtgtaacaccagtctacctcaag
gacaatgttttgcctgaattcttcaagcacttctgggtacgccgtatggctctcgacaag
cgcaactaccgacaggtggtcgacaccaccgtggatctagcccagaaggccggtgttgct
gagattgtcggccgtattgttaacaacatgaaggatgagaacgaagcataccgcaagatg
acggtcgaaactgtcgacaaggtcatcagcaccctcggtgctcatgacgtcgaccagcgt
ttggaagagcagctaattgacggtgtcctcgtcgcttttcaggaccagactattgaggag
cctattgtcattgacggttttgctacggtcgtcaacgccttgggtgagcgtacaaagact
tacctccctcagattgttgcgacggttcttgctaggcttaataacaagtccgctacggtc
cgccagcaagccgcggacctaatctcccgtattaccttcgtgatgcagaagtgcgacgag
gatccacagctcatcaagcttgcgcaggcgctttacgaatatcttggtgaggagtaccct
gaggttcttgggtccattcttggtgctctgcgcgctatcgtcacagtcgttggtctccac
gctatgcagccgcctattaaagacctattgcctcgcctgacacccattcttcgcaatcga
cacgaaaaggtacaagagaacaccatcgacctggtaggtcgcatcgctgaccgaggcgca
aactatgtcaaccctcgtgaatggatgcgaatctgcttcgaactcctagacatgctcaag
gctcacaaaaagggtatccgtcgtgctgccaacaacactttcggttatatcgccaaagcc
atcggtcctcaggatgtgttggctacccttcttggtaacctcagagtccaagagcgtcag
tctcgtgtctgtactgccgtcgctatcggtatcgttgcagagacttgtgcgccttttact
gtccttccggcccttatgaatgaataccgcgtgccggagctcaacgttcagaatggtgta
ctcaagtcgctatccttcatgtttgagtacattggcgagatggcgaaggactacgtctat
gctatcacaccactcctcgaggatgctctcattgatcgagaccaagtgcaccgacagact
gccgcttcggtagtcaagcatgttgctctcggttgtgtcggactcgactgcgaagacgcg
atgatccacttgctcaatctcctgtggccaaacttattcgaaaccagtcctcacgtcatt
gaccgcattattgaggctattgagggtgtccgcaacgccatcggtaccccgctcgtcatg
aactacgtttgggctggcctcttccatccagctcgcaaggtgcgacaaccttactggcgc
atctacaatgatgcatacgttcaaaacgccgatgccatggttccagcttacccagcattt
gaggaggacgaggtccggagacatgagctggacattttcatctaa
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