KEGG   Alternaria dauci: 96087265
Entry
96087265          CDS       T10615                                 
Symbol
ACET3X_006943
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
adac  Alternaria dauci
Pathway
adac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    96087265 (ACET3X_006943)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:adac03041]
    96087265 (ACET3X_006943)
Spliceosome [BR:adac03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    96087265 (ACET3X_006943)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd PRP4 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_SCAP Beta-prop_EML NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th WDR54 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_WDR19_1st PROPPIN Nbas_N Toprim_3
Other DBs
NCBI-GeneID: 96087265
NCBI-ProteinID: XP_069305711
LinkDB
Position
6:complement(join(1828310..1829806,1829914..1829964))
AA seq 515 aa
MSMHPARQAYVEEENGADDAMEGIDLSSVPLDRDHAMPGGGNASAHSLMEDFDRKRRAAQ
LIVPTADRDVKAKLRSRGEPITLFGEGPSERRDRLRALLAEAAEASGEDAADVDMQDADE
APGDEQEEFYTQGTQSLLDARRDMAKYSLPRAKERVAYQRREATIPLKTHVEFRNTIKDR
LKGFELYGSQTADRPVSIVRVSPNGKYVAYGTWGGKVALLEIPSLEQKKAYRGGHTERAT
GIDWMPGATLEGSNVSTSSVNFASGGAGGKIQLWSLDDDKPLRTLQGHTDRVCRVAFHPS
GRYLASASDDTTWRLWDVNTGQELLMQEGHSKEVYTVSFNGDGSLVASAGLDSIGRVWDV
RTGRVIYMLESHIKPIYGLDWATDGHRLLSGSGDGFMKCWDVRAMRETNSIAANTGGVTD
LRWFKGTDGPASGVPLQENSQGELIPKKASTFVISSGFDKNVQIFSADDWAHCKTLQGHS
GPVFSTDVTSDASWIVSGGKDRTVKLWARDDNGGI
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgagcatgcacccggcgcgacaggcctatgtcgaggaggagaatggcgcagatgatgcc
atggagggcatcgacctctcgagtgtgcccctcgaccgtgatcatgccatgcctggtgga
ggaaacgcgtcggcccattcccttatggaggacttcgaccgcaaacgacgagcagcgcaa
ctcatcgtaccgaccgccgaccgcgacgtcaaagcaaagctgcgctcacgaggcgagccc
atcactctgttcggcgaagggccttcggagcgacgcgaccggcttcgagctctgctggca
gaagcagccgaggcatcgggtgaggatgccgcagacgtggacatgcaagatgcagacgag
gcgcctggcgacgagcaggaagagttttacacccaaggcacacaatcactactcgacgcg
cggcgcgacatggccaagtactctctaccccgcgcaaaggagcgcgtcgcataccagcgt
cgcgaagctaccatcccgctcaagacccacgtcgagttccgcaacaccatcaaggaccgg
ctgaagggctttgagctctatgggtcgcaaaccgcagatcgcccagtcagcattgtgcgc
gtctcgcccaacggcaagtatgttgcgtatggtacctggggcggaaaagttgcgctcctg
gaaattcctagtttggagcagaagaaagcctatcgcggtggacacacggagcgcgcaact
ggcatagattggatgccaggcgcgacactcgagggcagcaatgtctcgacctctagcgtg
aatttcgcatctggtggagcaggcggcaagatccagctttggtcactagacgacgacaag
ccccttcgtactctccaaggccacaccgatcgcgtatgcagagtggcgtttcacccttct
ggacgatacttggcttccgcttccgacgacaccacatggcgactctgggacgtcaacacc
ggacaagagctcctcatgcaggagggccactcgaaagaagtctacaccgtaagcttcaac
ggcgacgggtccttggttgcaagtgcgggccttgacagcatcggccgcgtatgggatgta
cgcacaggtcgtgtcatatacatgctggagagccacatcaagcccatctatggtctggac
tgggcaacagatggtcatcgcctcctctctggctcaggggacggtttcatgaagtgctgg
gacgtgcgtgcgatgagagagacaaactcaattgcggcaaacaccggaggtgtcaccgac
ctacgatggtttaagggtacagacggaccagccagcggagtgccactgcaggagaacagc
caaggggaacttataccaaagaaagcctctacctttgtcatctcctctggatttgacaaa
aacgttcagatcttctcagcagacgactgggcgcactgcaaaacactccaaggtcactct
ggccctgtcttcagcaccgatgtgacgagcgatgcttcttggatcgttagtggcggtaaa
gaccgcactgtgaaactgtgggctagagacgacaacggaggaatatga

DBGET integrated database retrieval system