Alternaria dauci: 96087466
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Entry
96087466 CDS
T10615
Symbol
ACET3X_007144
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
adac Alternaria dauci
Pathway
adac03020
RNA polymerase
adac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
96087466 (ACET3X_007144)
09124 Replication and repair
03420 Nucleotide excision repair
96087466 (ACET3X_007144)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adac03021
]
96087466 (ACET3X_007144)
03400 DNA repair and recombination proteins [BR:
adac03400
]
96087466 (ACET3X_007144)
Enzymes [BR:
adac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
96087466 (ACET3X_007144)
Transcription machinery [BR:
adac03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
96087466 (ACET3X_007144)
DNA repair and recombination proteins [BR:
adac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
96087466 (ACET3X_007144)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
96087466
NCBI-ProteinID:
XP_069305912
LinkDB
All DBs
Position
6:join(2478992..2482611,2482669..2482834)
Genome browser
AA seq
1261 aa
AA seq
DB search
MADQYEYDPMEDEYEDEENRVLPEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIVK
ENGSVILEQNTPYNPDEEENPIIKRRYEIKFGRVYLARPTHTEGDGTTVQLYPHEARLRN
LTYSGAMLADIENRIMVAREGREPEEGDDEEMEGGYTGGPSQIRWEREDMPMDDGAAARV
FIGKLPVMLRSELCHLRAQSDADLFALNECPYDQGGYFVINGSEKVLIAQERSAANIVQV
FRKKQGPIPWIAEIRSAVEKGTRLISSFNIKWAENSLAGPGKRIPGPFAYATLPYIKADV
PMAIVFRALGIVSDEEILSHIVYDRTDTQMLELLKPSIEEGSVVQDRETALDFIAKRGAN
SGTKDRRLKFARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDHF
GKKRLDLAGPLVANLFRILFLKLTKDVYKYLQRCVENNQDFNVQMAVKASIITNGLKYSL
ATGNWGDQKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWGL
VCPAETPEGQACGLVKNLSLMCYVSVGSDASPIIDFMTQRNMQLLEEYDQNQNPDATKVF
VNGVWVGVHSNAQQLVTVVQELRRNGTLSYEMSLIRDIRDREFKIFTDAGRVMRPLFVVE
NDIRKPNRNHLIFTKEISNKLKQEQQETSTRQGWSQDEIDSATYGWRGLIQDGVVEYLDA
EEEETAMITFSPEDLEEWREMKMGLPAAERSTEGEHRLRRLKPLPDPRIHAYTHCEIHPA
MILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVALTNFALRMETMMNVLYYPQKPLATT
RSMEYLKFRELPAGQNAIVAIATYGGYNQEDSVIMNQSSIDRGLFRSLFYRAYTEQEKRI
GVNVLEQFEKPTRADTLRLKGGTYDKLDDDGVVAPGVRVSGDDIIIGKTAPIATDAQELG
QKTTLHTKRDVSTPLRSTENGIVDQVLFTTNTEGLRFVKVRTRTTKVPQIGDKFASRHGQ
KGTIGITYRQEDMPFSREGLTPDLIINPHAIPSRMTIAHLIECLLSKVGAITGQEGDATP
FTDITVDQVSGLLEDAGYQKRGFEIMYNGHTGKKMRTQIFLGPTYYQRLRHMVDDKIHAR
ARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCDIC
GLMSPIAQLKKGLYECRPCHNKTRISQIHIPYAAKLLFQELLAMNIATRMFTDRSGLSVR
D
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagtacgaatacgaccccatggaagacgaatacgaggatgaggaaaaccgc
gtcttgcccgaagactgctgggcggtcatcagctccttcttcgacacaaagggtctggtg
tcgcagcagctcgactcgtacgacgagttcacgcgcaacacaatccaggatatcgtaaag
gaaaacggtagcgtcatcctcgagcagaacacgccctacaaccccgacgaggaggagaat
ccgattatcaagcgccgctatgaaatcaaattcgggcgcgtctaccttgcgcggccaaca
cacaccgaaggcgacggcaccacggtgcagctgtatccccacgaggcgcgtctacgaaat
cttacctactcgggtgccatgttggcggacattgagaaccgaatcatggtcgcccgcgaa
ggccgtgagccagaggagggcgacgacgaggagatggagggaggctacacaggcgggcca
tcgcagattcggtgggagcgcgaggacatgcccatggatgatggcgcggcggcgagggtc
ttcatcggaaagctgcccgtcatgttgcggtcagagctctgccacttgcgagcccagtcc
gacgcagacctgttcgctctgaacgagtgtccttacgaccagggtggatactttgtcatc
aacggcagtgaaaaggtgcttattgcccaggagcgcagtgccgccaacattgttcaggtc
ttccgtaagaagcagggccccattccatggatagccgaaattcgaagtgctgtcgaaaag
ggcacccggttgatctcctccttcaacatcaagtgggcagaaaactcgctcgctggtccc
ggcaagcgtatccccggtcccttcgcatacgctaccctcccatacatcaaggcggatgtg
cccatggccattgtcttccgcgcgcttggtatcgtttccgacgaggaaattctgagccac
atcgtttacgaccgcaccgacacacaaatgctggagctgttgaagcccagtatcgaggag
ggttcggttgtccaagaccgcgagactgctctcgacttcatcgctaagcgtggtgccaac
tctggtacaaaggacagacgtctcaagttcgcaagggacattatgcagcgagagttcttg
ccgcacatctcccagaaggagggccaggacacacgcaaggcctacttcttcggttacatg
atccaccgcctcttgcagtgtgtgctgggtcgccgcgacgaggacgatcgtgatcacttc
ggaaagaagcgtttggatttggctggacccttggttgccaacttgttccgtatcctcttc
ctgaagctcaccaaggacgtatacaagtacctccagcgatgtgtggagaacaaccaggat
ttcaacgttcagatggctgtcaaggccagcatcatcacaaacggcctgaaatactctctg
gcaacaggaaactggggtgaccagaagaaggccgcttccgcgaaagccggtgtctcccag
gtgttgaaccgatacacttatgcctccacactgtcccatttgcgtcgaacaaacaccccc
gtcggtcgtgatggaaagctggccaagccgcgacaacttcacaactctcattggggtctc
gtctgccctgccgagactcctgaaggacaggcttgtggtctcgtcaagaatttgtctttg
atgtgctacgttagtgtcggtagtgacgcttctcccatcatcgacttcatgacacagcga
aacatgcaacttctggaagagtacgaccagaaccagaaccccgatgccaccaaagtcttc
gtcaacggtgtctgggttggtgtccattccaacgctcaacaacttgtcaccgttgtgcag
gagctgcgacgtaacggaactctatcctacgagatgagtctgattcgtgacattcgtgac
cgagagttcaagatctttacagatgctggccgtgtcatgaggccactgttcgttgttgaa
aacgacatccggaagccaaaccgcaaccacctcatcttcaccaaggagatcagtaacaag
ctcaagcaggaacaacaagagaccagcacacgacaggggtggagtcaggatgagattgat
tcagctacttatggctggagaggtcttattcaagatggcgttgtggagtacctagacgcc
gaagaggaggagaccgccatgataacgttctctcctgaggatctggaggagtggcgggag
atgaagatgggcttgcctgcggcggagcgatccactgagggcgagcaccgtctccgacgc
ctcaagccactaccagacccccgcatccacgcctacactcattgcgagattcatccggcc
atgattctcggtatctgtgccagtatcattcccttccccgatcacaaccagtcgccccgt
aacacctaccaatctgccatgggtaagcaagccatgggtgtcgcccttaccaactttgcg
ctacgcatggaaaccatgatgaacgtcctgtactacccccagaagccactggcaactact
cggtcgatggagtatctcaagttccgtgagctacccgctggtcagaacgccattgtcgcc
attgctacatacggtggttacaaccaggaagattccgtcattatgaaccagagcagtatc
gatcgtggactgttcaggagtttgttctaccgtgcatatactgagcaagagaagcgtatt
ggtgtcaacgttctcgagcagtttgagaagcctacccgtgccgacacgctccgcctcaag
ggtggaacatacgacaagcttgatgacgatggtgttgttgcgcctggtgtgcgtgtttct
ggtgatgatatcatcattggaaagacggcgcccattgcgaccgatgcacaggagcttggc
cagaagactactctccataccaagcgtgatgtttcaacgccactccgaagcaccgaaaac
ggtatcgtcgaccaggtactcttcaccaccaacaccgaaggcctccgattcgtcaaggtt
cgtacgcgaactaccaaggtcccacagattggtgacaagtttgcttctcgccacggtcaa
aagggaaccattggtatcacgtaccgtcaagaagatatgcctttctcaagggagggactg
acgccggatctgatcatcaacccccacgccattccgtctcgtatgacaattgcccatttg
atcgagtgtctgctctccaaggtcggtgccatcacgggacaggaaggtgacgccacgcct
ttcaccgacatcaccgtcgaccaagtgtctggtctgctcgaggatgccggctaccaaaag
cgtggttttgagatcatgtacaacggccacactggaaagaagatgcgaacgcaaatcttc
ttgggtcctacctactaccaacgtctgaggcatatggtcgacgacaagattcacgcgcgt
gctcgtggccctctgcagattctcactcgccagcctgtcgagggtcgtgctagggacgga
ggtctccgtttcggagagatggaacgtgattgtatgattgctcacggtgcggcggcgttt
ttgaaggagcgtctcttcacggtatcggatgcgtacacggtgcacgtgtgtgatatctgt
ggtctgatgagtcctatcgcacaactcaagaagggcctctacgaatgccgtccttgccac
aacaaaacgcgtatttcgcagattcacatcccctacgctgccaagctcctcttccaggaa
ctccttgctatgaacattgctacgcgcatgtttactgatcgctctggattgagtgtgcgt
gattag
DBGET
integrated database retrieval system
