Alternaria dauci: 96087622
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Entry
96087622 CDS
T10615
Symbol
ACET3X_007300
Name
(RefSeq) hypothetical protein
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
adac Alternaria dauci
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
adac03012
]
96087622 (ACET3X_007300)
Enzymes [BR:
adac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
96087622 (ACET3X_007300)
Translation factors [BR:
adac03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
96087622 (ACET3X_007300)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
HA2_C
OB_NTP_bind
HA2_N
ABC_tran
nSTAND3
NPHP3_N
AAA_23
AAA_29
AAA_19
Rad17
Motif
Other DBs
NCBI-GeneID:
96087622
NCBI-ProteinID:
XP_069304463
LinkDB
All DBs
Position
7:complement(join(379358..382346,382391..383817))
Genome browser
AA seq
1471 aa
AA seq
DB search
MAKKKKPAGNPARGFATTSVASKPKLEKTAADAPANQVAQAPSKESATAPGPTDAPSTSA
TTEAPKPEVAPTPEELEAQLERDELQLLVEKHAPKVRRESSRYVSKFQTDRRLLRSQSHA
MTVHDWLPSGILDEIILLAQAESNDSNRRQGQQSLLKTLTEEDAMSKLWTLDLTLRELGF
SQDHIQPVLRWLCANAASIDASAGIWGLQEALEWLALDQCEDHSFSYEDSQPKRSGLESL
DVSRPPTPPPQPSANGNTTSGASPSAPIKASAPAESSQSDVDVSDLDSDLELDELTPAYL
KIKGKLFEIDPQLVDASTRKPKGKSKKAAPVPTQTPAVRKLLSQLQQIMSDPLFDEYQAE
AQWPAKRNQIAQSQAEKRQRNGPQSSDSRLQDNDATLDLPVSAKIEANPAPADPPSDRDG
EEDADLLGGMFAVPDATAAPEATSNGTSTENIVLRDFGKMSGVSPRKVLEEAVRSRDAGA
RLSYKMISPTTYTCRHSVSITWSKEQDIEYDTDIAGVVCTPYRKQIIFAATDIAAVSVEQ
SESFISVAALFSISAALSKEEKVYLRLPSNWRDVYREFLERRKTRLDAEDRDAIKHYRSI
IEDQIENEESDGVVLTNRFKMRAQAATSSSASNSGYNTPVRHHDSLRELWAAKASTPSYQ
HMLVGRMSLPVFNFRASILSTVDKNQVTIICGETGCGKSTQIPAFVLEHELSQGKACKVY
CTEPRRISAISLAQRVSEELGEGPKDLGSMRSLVGYAIRLESKTSSQTRLVYATVGVVLR
MLESPGGLQEVTHLVIDEVHERSIDTDFLLVILRSLMERRPELKVILMSATVDAARFSRY
LNDAPILTVPGRTFPVQTRYLEDAIELTNYTGASDTVKNAATSDDDEGDDITSDQSGIPS
KLPGYSPATRSVLSAYDEYAIDYDLITRLIETVAYDPQLSRFSSAILVFLPGIAEIRQLN
DILVSHPSFKADWYVYPLHSTISSEDQQAAFLVPPPGIRKIVLATNIAETGVTIPDITCV
VDTGKHKEMRFDERRQLSRLTQSFISRANAKQRRGRAGRVQEGLCFHLFTKHRHDNLMAE
QQTPEMLRLSLQDLVMRVKICKLGDIEATLAQALDPPSSRNIRRAIDALVEVDALTPSEE
LTPLGRQIAKLPLDAHLGKLVLLASTFACVDVAITIAAIVSSKSPFLTPFGAKQRADIAR
LAFKKGDSDLLTTYNAYRAWKAVCTTPGRSEMQFCHKNFLSPQNLGNIEDLKAQLFSSLV
DAGFIQLTPDERRSMSRYRNTSRHRVFVDIPAQYDIHTDNDVLVNSVIATAFYPKILTRE
GKGWRNISNNQTVSLSPTSVNKGSQTAHFLSYYNIMQSSNKFYNAHSTSIAYPLPMVLMV
AADNAMDFKLHAGVISLPGNVLRFAVREWRAAVALKVLRRRIKEILANSWKNPSRQLSDR
EKEWLGLFYRMFEERFEKDERIRERGGGKAK
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaaagaagcccgccggcaaccccgctcgaggattcgcgacgacgtctgtt
gcgagcaagcccaagctagaaaagacagccgcggacgccccagctaaccaagtcgctcag
gcgccgtcaaaggaaagcgcaactgccccagggcctacagatgccccgagcacgtccgcg
acgactgaagcgcccaagccagaggtcgcacccacgcccgaggaactcgaggcccagcta
gagcgagatgaactccaactgctcgttgagaagcacgcgcccaaggtccgccgcgaatct
agtcgatatgtctcgaaattccagacagatcgcaggctcctccgcagccagtcgcatgcc
atgacggtccacgactggcttcccagtgggatcctggacgaaatcatcctcctagcccag
gcagagtcgaacgactccaacaggagacaggggcagcagtctcttctcaagacgctgaca
gaagaggacgccatgtccaagctttggacccttgatcttaccctgcgtgagctcggtttc
tcccaagaccacatccaacccgtcttgaggtggctctgtgctaatgctgcaagcattgac
gcgtctgctggtatctggggtctgcaagaagcgctagagtggcttgcgttggaccagtgc
gaggaccattctttctcatacgaagactcgcaacccaaacgatcagggctcgaatctctc
gatgtctctcgacctccaacaccgccgccccagccgtctgccaacggaaacaccacctcc
ggagcctcaccttccgcccctataaaagcttcagcaccggcagagtccagtcaatcggat
gtcgacgtcagcgacctcgatagcgaccttgagcttgacgagcttacccctgcgtatctg
aagatcaagggcaaactgttcgagattgatcctcagctcgtcgatgcctctacacggaag
ccaaaaggaaaatctaagaaagctgcgcctgtgcccacgcagactccagctgttcggaag
ctgctctcccagttgcagcaaattatgtctgatcctctctttgacgagtaccaagctgaa
gcacagtggcccgcaaaacgtaaccaaatcgcacagagtcaagctgaaaagaggcagcga
aatggtccacagtctagcgattcgcgactgcaggataatgacgccactcttgatctccca
gtatctgcaaagattgaagccaaccccgcaccagcagatcctccaagcgatcgcgatggc
gaagaggatgccgacctactaggaggcatgttcgcagtacccgatgcaacggccgcccct
gaggctacctccaacggtacgagtaccgaaaacatagtactacgcgactttggcaagatg
agcggagtgtctcctcgtaaagtgctagaagaggcggttagatcgagggatgctggggcg
cgactatcttataaaatgatctcaccgacaacatatacctgtcggcactccgtgagcatc
acgtggtccaaggaacaagacatcgagtacgacacagacattgccggggtcgtttgtact
ccgtaccggaagcaaatcatttttgccgcgaccgacatcgctgctgtatcggttgagcaa
agtgaaagcttcatatctgtggctgcactcttttcaatctctgctgctctatccaaagaa
gagaaagtttacctccggcttccgtctaattggagagacgtgtacagggagttcctagag
cgccggaagacgcgtctggacgcggaagatcgtgacgctatcaaacactaccgctcgatc
atcgaggatcagatcgagaacgaagagtcagatggtgttgtgcttacgaatcgcttcaag
atgcgcgctcaggcggctacaagctcgagcgcatcaaattctggctataacacaccggtg
agacatcacgacagcctcagagaactatgggccgcaaaagcttcgactccatcataccaa
catatgcttgttgggcgaatgagccttccagtcttcaatttcagagcctccatcttgtcg
acggttgataagaatcaggttaccatcatttgcggtgagaccggctgtggaaagagtacc
cagatccctgccttcgtcctcgagcacgagctctcgcaaggtaaagcatgcaaggtctac
tgtacagagccgagacgtatatctgcgatttcgcttgcacaacgtgtgagcgaggaactt
ggcgaggggcccaaggaccttggatctatgcgctcacttgtaggatatgcaattcgtctt
gaatcaaagacctcttcgcagactcgcttggtgtatgcgactgttggtgtggtactgcga
atgctagaatcacctggaggcctacaggaggttacacatctggtcattgacgaggtccat
gaaagatctattgacactgatttccttcttgtcatccttcggtcgctcatggaacgccga
ccggaactcaaggtcatactaatgagcgccacggtcgatgccgcacgtttctcaaggtac
ctcaacgacgcgccgattctcacagtaccaggccgtactttcccagtccagactcgatat
ctggaggatgcgattgagttgaccaattacacgggagcatctgatacagtcaaaaatgcc
gctacaagcgatgacgacgagggtgacgatattacgagcgatcaatccggtatccccagc
aaactcccaggctacagccctgccactcgtagtgtgctctccgcttatgacgagtacgcc
attgactatgatctgattacacgtctgattgagactgtcgcgtatgatccacaattgagt
cgcttcagcagcgccatcttggtcttccttccgggcattgctgagatccgccagctcaat
gacatattggtcagtcatccctcattcaaggccgattggtatgtgtacccgctgcactct
accatttcaagcgaagatcaacaggccgcgttccttgttccgcccccaggcatacgcaaa
atcgtgcttgctacgaacattgctgagactggagttacaattccggatattacctgcgtc
gttgacacaggaaagcacaaggagatgaggttcgacgaacgcagacagctatcacgcttg
acacaatcgttcatctcaagagccaatgcaaagcagcgacgcggtcgtgctggccgtgta
caggaagggctttgcttccatctctttacaaaacaccgccacgataatctcatggccgaa
cagcaaacgcctgagatgctgaggctttcactccaagacttggtcatgcgcgtaaaaatc
tgcaaactgggtgatattgaggctacccttgctcaagcactcgatccaccctcttcgagg
aatatccgccgtgctattgatgcactcgtggaggtcgatgcgctgacgccgagtgaggag
ttgacacctcttggtcgtcaaatcgcaaagctcccgttggatgcgcacttgggcaagctt
gtacttcttgcaagcacatttgcatgtgttgatgttgccattaccatcgctgccattgtt
tcgtccaagtcacccttcttaacaccgtttggagctaagcaacgagccgatatcgctcgg
ctcgcattcaagaagggcgactccgacctcctcaccacatacaacgcgtacagggcctgg
aaagcagtctgtaccacgccaggacggtccgaaatgcaattctgccacaaaaacttcctc
agcccgcagaaccttggaaacatcgaggacctcaaagctcagctgttctcctcactagtc
gacgcaggcttcatccaactcacgcccgatgagcgccgctccatgagccgctaccgcaac
acatcccgccaccgcgtctttgtcgacataccagcccaatacgacatccacaccgacaac
gacgtcctggtaaactcggtcatcgcaacagccttttaccccaagatcctgacccgcgaa
ggaaaaggctggcgcaacatctccaacaaccagactgtttccttgagcccaacttccgtc
aacaaaggcagccaaaccgcacacttcctttcgtactacaacattatgcaatccagcaac
aagttctacaacgcgcattctacttcgatcgcgtatccccttcccatggttctcatggtc
gctgcggataacgccatggatttcaagttacacgctggtgtcatcagtttgcctggcaac
gtgctccggtttgcggtcagggagtggagggcagctgttgcgctcaaggtgttgagacgc
cgcatcaaggaaattttggcgaatagctggaagaatccgagtaggcagctgagtgatcgc
gagaaggagtggttgggtttgttttataggatgtttgaggagaggtttgagaaggatgag
aggattagggagaggggtggggggaaggcgaagtga
DBGET
integrated database retrieval system
