KEGG   Alternaria dauci: 96087632
Entry
96087632          CDS       T10615                                 
Symbol
ACET3X_007310
Name
(RefSeq) hypothetical protein
  KO
K14402  cleavage and polyadenylation specificity factor subunit 2
Organism
adac  Alternaria dauci
Pathway
adac03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:adac00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    96087632 (ACET3X_007310)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adac03019]
    96087632 (ACET3X_007310)
Messenger RNA biogenesis [BR:adac03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     96087632 (ACET3X_007310)
    U7-dependent histone pre-mRNA processing factors
     96087632 (ACET3X_007310)
SSDB
Motif
Pfam: Lactamase_B_6 CPSF100_C Beta-Casp RMMBL Lactamase_B
Other DBs
NCBI-GeneID: 96087632
NCBI-ProteinID: XP_069304473
LinkDB
Position
7:join(417352..417497,417659..420362)
AA seq 949 aa
MFNFTPLLGAQSSSPASQSLLEFDGGIQILIDVGWDEDFSVEKLKEIERHVPTLSFILLT
HATTAHLGAYVHCCKNFPLFTRIPVYATNPVISLGRTLLQDLYESTPLASSIIPTEALSE
SAYSFSSALKGGKNPNILLQAPTSQEIADYFARINPLRYSQPHQPIPSPHSPPLNGLTIT
AYSAGHTLGGSIWHIQHGMESVVYAVDWNQAREHVLSGAAWLGGPGTGGAEVLEQLRRPT
ALICSSKNTSMVKVARPPSKRDEALLEMIQDTVAKGGTVLIPSDSSARILELAYLLEETW
ERETTNVEGGGSLRSAKVYLASRTGGATMRYVRSMLEWMEEGIVKEFEASAADQDRRNKN
GKEEDRARVPFDFKHITLVERKTRVARMLGATGPRVILASDATLEWGFSKDALRSLASDE
KNLVILTERAGQLGAQKKGLGRYLWELWNQRNASPGQDAPSISVIDAAGDQAPFNTVRTV
ALEGDEVPLYQQFLAGQRQRQTTMGGDNAAMLETSADIVDDRSSTESESSEGSGDGYRGK
ALNATVALQHARNKLGMTDAELGVNVLIRRKNVYDYEVQGKKGKEKMFPFQAKKRRADDF
GDLIRPEDFARAEEEDNTAGEALHGEGTKKENAVGQKRRWDDLLNSTDANKANANQKRRK
DKEVREGEDAESDSEPEDEPDKVEGPSKVIIESETLEIRCRIAFVDFSGLHDRRTIQQLI
PLIKPRKLILVGGEEGETLELAEISRIALNANTDSANAIDVFTPAVGTMIDASVDTNAWS
VKLSRSMVRNLRWQNVRGMGVVAITGRLAAASLEPKVEEEADTPAKKKARLDAPAIPVSS
DKNDETPVLDVVPTNMATAVRSVAQPFHVGDLRLADLRKLMNANGMQAEFRGEGVLVING
TVAVRKTATGQIEIDGGAYGNLDPRNNDAATFSRVRRQIYEGLAVVAGG
NT seq 2850 nt   +upstreamnt  +downstreamnt
atgttcaacttcactcctctgctaggcgcgcagagctcctcgccagcgtcgcagtcactg
ttagaattcgatgggggcatacaaatcttgatcgatgttggctgggacgaggacttcagc
gtagagaaactcaaggagattgagagacatgtccccaccctgtccttcattctgcttact
cacgcaaccactgcgcatctcggcgcctacgtacactgctgcaagaactttcctctattc
acgcgcatacccgtctacgcgacaaaccccgtcatatctctcggccggacgctgctccaa
gatctgtacgaatccacgccgcttgcatcgtcgattatccccaccgaggctctcagcgag
tccgcctactccttctcctcggcactcaagggcggcaagaatcccaacatcctcctccaa
gcgcctacatcgcaagagattgccgactactttgcccgcatcaacccgctccgatactcg
caaccgcatcagcctatcccttcgccgcactcgcccccacttaatggtctcaccattacc
gcatacagcgccgggcacactctgggaggttcaatatggcacatacagcatggcatggag
tcggtcgtctatgccgttgactggaatcaggctagggaacatgttctttcaggagctgcg
tggttgggaggacccggcaccggtggcgctgaagtcttggaacagttgcgtcgtccaact
gccttgatctgcagcagcaagaacaccagcatggtaaaggtggctaggccgcctagcaag
cgagatgaagcccttctcgagatgattcaagataccgtggccaagggcggaaccgtcctg
attccatcagactcaagcgcgcgtatacttgaactggcatatctcctcgaagagacctgg
gagcgcgagacaacaaacgtcgagggtggcggttcactacgaagcgcaaaggtctatctt
gcaagtcggacaggtggtgcaacaatgcgctatgtgaggagtatgttggaatggatggag
gagggcatcgtgaaggagtttgaagcgagtgctgccgaccaagaccgaaggaacaaaaac
gggaaagaagaagaccgggccagagtcccgttcgactttaaacacataacgttggttgag
cgcaagacacgtgtagctcgcatgctgggtgcaactgggccacgagtgatactagcaagc
gatgcgacgctcgagtgggggttctcgaaagatgctcttcgaagcctggcatctgacgag
aagaacttggtcatactaacagaaagagctggtcagctgggcgcacaaaagaagggtctc
ggtcgatacctctgggagttgtggaaccagcgcaatgcatcgccgggacaggatgctcca
tctattagtgtgatagacgccgcaggtgatcaagcaccattcaatactgtacggacagtc
gcactcgaaggcgatgaagtcccactataccagcagttcctcgccggccagagacaacgg
cagaccaccatgggcggcgataatgcagcgatgctcgaaacgtccgctgacatcgttgac
gatcgatcttccaccgagtctgagagttcagaaggctccggtgacggatatcggggaaaa
gcgctcaatgccaccgttgcccttcaacacgcacggaacaaacttggtatgacagacgct
gaattaggcgtcaatgtactcatacgccggaagaatgtttacgactacgaagtgcaagga
aagaaaggaaaggagaagatgtttccgttccaggccaagaagcgtcgcgcggacgacttt
ggtgatctcattcgccccgaagattttgcgcgtgctgaagaggaggacaacactgccgga
gaagctcttcatggtgaagggacaaagaaggagaatgctgttggccagaagagaagatgg
gatgatctattaaacagcaccgacgccaacaaagccaacgccaatcaaaagcgtcgaaaa
gacaaggaggttcgagaaggcgaggatgcggaatcggacagcgaaccagaagacgagcca
gacaaggtggagggaccatcgaaagtcatcatcgagtcggagaccctggagatccggtgt
cggattgcctttgtcgacttctcgggtctgcacgatcgccgcacgatccagcagcttatt
ccgcttatcaaacctcgcaagctgatcctcgtgggcggcgaggaaggcgagactctcgag
ctcgcagaaatcagtcgaatagcgctgaatgcgaacaccgattctgccaacgccatcgat
gtcttcacacccgccgtcggcactatgatcgacgccagtgttgatacaaatgcctggagc
gtcaagctcagccgcagcatggtacgcaacctgcgctggcagaatgttcgtggcatgggc
gttgtggctatcactggccgtctcgcagctgcaagccttgagcccaaggtcgaggaagaa
gcggacacgccagcgaagaagaaggctcgactcgacgctcccgccatccccgtgtctagc
gacaagaacgatgagacgcccgttctcgacgtcgttcctaccaatatggctaccgctgtc
cgatccgttgcgcaacccttccatgttggtgatcttcgtcttgccgatctgaggaagctc
atgaatgccaacggcatgcaagcggagtttaggggcgaaggtgtactagttatcaacggt
acggtggctgtgaggaagacggctactggtcagattgagattgacggaggagcgtatggt
aatttggacccaaggaacaatgatgctgcaacgttctcgagggtcaggcgacagatctat
gagggtctggctgtagttgcgggaggctaa

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