KEGG   Alternaria dauci: 96088798
Entry
96088798          CDS       T10615                                 
Symbol
ACET3X_008476
Name
(RefSeq) hypothetical protein
  KO
K12831  splicing factor 3B subunit 4
Organism
adac  Alternaria dauci
Pathway
adac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    96088798 (ACET3X_008476)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:adac03041]
    96088798 (ACET3X_008476)
Spliceosome [BR:adac03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    96088798 (ACET3X_008476)
 Complex B
    96088798 (ACET3X_008476)
 Complex C
   U2 SnRNP specific factors
    96088798 (ACET3X_008476)
SSDB
Motif
Pfam: RRM_1 RRM_7 AbpA-like Cas_Cas2CT1978 RRM_MARF1
Other DBs
NCBI-GeneID: 96088798
NCBI-ProteinID: XP_069304078
LinkDB
Position
8:complement(join(1578821..1579793,1579841..1579866))
AA seq 332 aa
MSAPSARHWEQNKEATVYVGNLHERVTPRILHELMLNAGRVRNVNMPVDRVNGQHQGFGF
VEFHTESEADYAPKIMNNVALYGSRIRVNKASADKQKNVEIGAELFIGNLDPGVDEKTLY
DTFGRFGPLVNAPKVARDDVTSASKGYGFISYGDFESSDAAIASMHNQYIMSKQITVQYA
YKKDGKGERHGDEAERMLAKQAKAHGVAPAVQPLPAHLFQLPPGAAPTGPAMGVDGRGVP
GAPSGPGAGYGPPGGPPGYAPNGPGGYGRPPSAAPVGHPGLPPPPSGLPARPPSGAPTNF
FPPPPGFNGPPPGFGGPPPGFGAPPGYAQAPR
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtcggccccgagtgcgcgtcactgggaacagaacaaggaagcaaccgtctacgtcgga
aacctccatgagcgcgtcacgccccgcatccttcacgagctgatgctcaacgctggccga
gtacggaacgttaatatgcccgtcgatcgcgtcaacggccaacatcaaggatttggcttc
gtcgagttccacacagaatcggaagccgattacgcgcccaagatcatgaacaacgtcgct
ctgtacggaagcagaatacgcgtgaacaaggcatcagcagacaagcagaagaacgtagag
attggcgcggagctgttcattggcaaccttgatcctggagtggacgagaagacactgtac
gacacgttcggtcgtttcggaccgctagtgaatgcgccaaaggtcgcgcgcgacgatgtc
acgagcgcatccaaggggtatggtttcatctcgtacggcgacttcgaatcctccgacgcg
gctattgctagcatgcacaaccagtatatcatgagcaagcagattacagttcagtatgcg
tacaagaaggatggcaagggcgagcgacacggagacgaagccgagcgtatgctcgcgaag
caggccaaggcccacggagttgcgcctgcggtacaaccgctgccagcacatctcttccag
cttcctccaggtgctgcacctactggaccggccatgggcgtggacggccgaggtgtacct
ggtgcgccaagcggacccggcgcaggatacgggcctcctggtggaccccctgggtatgct
cctaatggacctggaggctatggacgacctccttccgcagctcctgtcggtcatccaggt
cttccaccacccccatctggcttgcccgctcgcccaccaagcggcgctccaaccaatttc
tttcctcctccgcccggattcaacggcccacccccgggctttggcggcccaccacctggc
tttggagcaccgcccggctatgctcaggcaccgaggtag

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