Alternaria dauci: 96088884
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Entry
96088884 CDS
T10615
Symbol
ACET3X_008562
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
adac Alternaria dauci
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adac03021
]
96088884 (ACET3X_008562)
Transcription machinery [BR:
adac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
96088884 (ACET3X_008562)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_12
TPR_14
TPR_6
TPR_16
TPR_7
TPR_17
TPR_11
ARM_TT21_N
TPR_Slam
TPR_10
ANAPC3
HAT_PRP39_C
TPPII_C
Motif
Other DBs
NCBI-GeneID:
96088884
NCBI-ProteinID:
XP_069304164
LinkDB
All DBs
Position
8:join(1853616..1854012,1854064..1856120,1856173..1857261)
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AA seq
1180 aa
AA seq
DB search
MAAVYANGANGVNGAGSMFPPPRYSDVPSSITISVADDEGGQLDVEIPLDEQIQDDPTEL
CDILEAEKSATSTWVQVAVAYAKRKRIETAIDVLRQATHVFNRARGEDRLSILNGLCWLY
LLKCREAPRVRPQNADGDVKLKEYWIQSATGVLNDASRISPSHPPLFLARGVLYLLKASL
QGPATTAGSTVSPERMETLKQAAKCFEDALRASNGRNLMAKMGKARVHYSMGKWADALKG
YQNILESSPDLLDPDPRIGIGCCFWQLGHKDEAATAWQRSLELNPKSKIALILMGIYNFQ
QTANLSTSDPKFAALIKKATGEYIQPALKIDNQYPLSCATVGSYLSLRRDLAKTEDVAKR
AIELTDTNAIASDGWYLRAKVAHQQENISLAAEYYQKSDQARGGEERGFIPAKFGLAQMN
VLMNNYDGAKFRLEKILQQSPNVEAQTLLGTLFAEDVFTAQNNKSTEDKSAELKKALKYL
ESVQSAWKDPKKKVTPDQSVLLNLARLYETEHPEKSLKCLEEVEQMEIEAIPEEDYPEGV
EEGPELTAALRQLLPPQLLNNMGCFHFQAERYVRAQELFQVALNACVNAENRDDTIDTDA
LVTSISFNLARTYEAEGQAEEAKKVYNSLLQRHPDYVDARIRLTYIALRENPQDEGPRAM
KDLFKENEDNIEVRALYGWYVNKSKKRTSNFAADDEQRLYKHTLQKSDKHDRYSLMGMGN
IHLAIAREMPRSSEQDKEKRRKGYERAVEFFDKVLQLDPKNAYAAQGIAIALVEDKKDYS
TALQIFTKVKETLKDHSVFVNLGHTYCEIRQYARAIENYEAALSRNRHNDPKILACLGRT
WYLRAKHERSLAGFRTALDYSKQALKAAPADLNSQFNVAFVQFQIASQVHQLKETQRTLE
EVDEAATGLTEAIEALDKLAKEETPPFPRADITSRANMGRNTIAKQLERDREQQALYEGE
NATKLDQARRIREAEVRRREEEKARAEAEALEKKRKYAEEQQRLLQRDRELMEKRNEEER
RRMEEDEDKEVRKAERRARGPKGPKRKKKNADSDTDDGLPSDDDEPRSRRRRTTASGTED
LSDEERPREKKKRKLARKSEPAGKYKSAEFIDDESDEEAAAPAHDADKADAAAGSDDEGA
AAAAPRPRKARVVDDEDEDEDAVAAPKANGDVAMDDDEDE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtttacgccaatggcgcgaatggcgtgaacggcgccggcagcatgttccca
ccgccacgatactcggatgtgcccagctccattaccatctctgtcgccgacgatgaggga
ggccagctcgacgtcgaaatccccttggacgagcagatccaggacgacccgaccgagctg
tgcgacattctagaggctgagaagagcgcgacatcgacatgggtccaggtcgccgtcgcc
tatgcgaagcgcaagaggatagagacggccatcgacgtgctgaggcaggccacccacgtc
ttcaatcgcgcgcgcggcgaggacaggctcagcatcctcaacggcctctgctggctgtac
ctgctcaaatgccgcgaagcaccgcgcgtcaggccccaaaacgcagatggagacgtcaag
ctcaaagagtactggatccagtcggccactggcgtactcaacgatgcctcccgtatcagc
ccctcgcaccccccgctgttcctcgcccgtggtgtcttgtacctgctcaaggcttcgctt
cagggccctgcaactactgccggctccacggtcagccctgagcgcatggagacgctcaag
caggctgcaaagtgcttcgaggacgcgctccgagcctccaacggcagaaacctcatggcc
aagatgggcaaggcccgtgtccactactccatgggcaagtgggcagacgccctcaaggga
taccagaacatccttgagagctctcccgacctcctcgacccagacccgcgcattggtatc
ggctgctgtttctggcaactcggtcacaaggacgaagctgccaccgcctggcagaggtct
ctcgagctgaatccaaaatccaagattgccttgatcttgatgggtatctacaacttccaa
cagaccgccaacctgtccacttccgatcccaagttcgccgcactgatcaagaaggcaacc
ggtgaatacatccagcccgcactgaagatcgacaaccagtaccccttgagttgtgccacg
gtcggcagctatctttctctgaggagggatcttgccaaaactgaagacgttgcaaaacgg
gccatcgagcttaccgacaccaatgccatagctagcgacggttggtatctacgagccaag
gtcgcgcatcaacaggagaacatttcacttgccgcagagtactaccaaaagtccgaccag
gcgcgaggaggcgaggagcgaggtttcataccagccaagttcggactggcgcagatgaac
gtcttaatgaacaattacgacggcgccaagttccgcctcgagaagattctccagcaatcg
cccaacgtcgaagcgcagaccctccttggtaccttgttcgctgaggacgtttttaccgct
cagaacaacaagtccaccgaagacaagtctgcagagttgaaaaaggcactcaaatatctc
gaaagcgtgcagagcgcgtggaaggacccaaagaagaaggtcacgcctgaccagtcggta
ctactcaacctcgcccggctctacgagaccgaacaccctgaaaagagcctgaagtgtctt
gaggaggtagagcagatggagattgaggccattccagaggaagattacccagaaggagtt
gaagagggccccgaactcacagcagcacttcgccaactcctgccaccacaactactcaac
aacatgggatgtttccacttccaggccgaacgctacgtacgtgctcaggagcttttccag
gtagccctcaacgcctgtgttaatgcagagaaccgcgatgatacgatcgatacggacgcg
cttgttacctccatcagctttaacctagcccgaacttacgaagccgagggccaagcggag
gaagctaagaaggtgtacaatagtctgctgcaacgacaccccgattacgtcgacgcgcgc
atccgtctgacctacatcgcgctaagggagaacccacaagacgagggtcccagggcgatg
aaggatctcttcaaagagaacgaggacaatatcgaggtgcgagccttgtacggctggtac
gtcaacaaatcgaagaagaggacgtccaactttgcggcggacgacgagcagcgcctctac
aaacacactctgcagaagtctgataagcacgaccgctactcgctcatgggcatgggcaac
atccatctcgccatcgcgcgtgagatgccccgaagttcagaacaggataaggagaagcga
cggaagggctacgagcgagcagtggagtttttcgacaaggtgttgcaactcgaccccaag
aacgcgtatgctgctcagggtattgcaatcgcactggtagaagataagaaggattactcg
acagccctgcaaatcttcaccaaggtgaaggaaacgctcaaagaccacagcgtctttgtc
aacttgggtcacacatactgcgagatcaggcagtacgcgcgagccatcgaaaattacgaa
gcagccctgtccaggaacagacacaatgacccaaagattctggcttgtctaggacgaact
tggtatctccgagccaaacacgaacgcagccttgccggattccgaacagccctcgactac
tcaaaacaagcgctcaaagccgctcctgcagacctcaactctcaattcaacgtcgccttt
gtccagttccagatcgcctcgcaggttcaccagctcaaggagacgcagcgcacgcttgag
gaagttgatgaggctgcgacaggtctgactgaggcgatcgaagcacttgacaagctcgcc
aaggaggagacgccaccgttcccacgtgcagacattacctctcgtgcaaacatgggtcgc
aacaccatcgccaagcagcttgagcgtgatcgcgaacagcaggcattgtacgaaggggag
aacgcgaccaagctcgaccaagcgcgccgcatccgcgaagctgaagtacgtcgccgtgag
gaagaaaaggcacgcgcagaggcagaagctctggagaagaagcgcaagtacgccgaagag
caacagcgccttctccaacgtgaccgcgagctcatggagaagcgcaatgaggaagagcgt
aggcgcatggaagaggatgaggacaaggaagtccgcaaggcagaacggagagcgcgtggt
cccaagggcccgaagcggaagaagaagaacgctgactctgataccgatgacggcctgcct
tctgacgacgacgagccgcgctcaaggcgtagaaggaccacggctagtggcaccgaggac
ctgtccgacgaagagcgaccccgtgagaagaagaagaggaagctggctcgtaagagcgaa
cctgctggcaaatacaagtcggcagagttcatcgatgacgagagcgacgaagaggctgcc
gcgcctgcccacgatgcagacaaggccgacgcggcggcgggcagcgacgatgaaggtgcc
gcagccgcagctcctcgtccccgcaaagcccgtgtcgtcgacgacgaagacgaagacgaa
gacgctgtcgctgcaccgaaagcgaatggcgacgtcgccatggatgacgatgaagacgag
tag
DBGET
integrated database retrieval system
