Alternaria dauci: 96089086
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Entry
96089086 CDS
T10615
Symbol
ACET3X_008764
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
adac Alternaria dauci
Pathway
adac03030
DNA replication
adac03410
Base excision repair
adac03420
Nucleotide excision repair
adac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
96089086 (ACET3X_008764)
03410 Base excision repair
96089086 (ACET3X_008764)
03420 Nucleotide excision repair
96089086 (ACET3X_008764)
03430 Mismatch repair
96089086 (ACET3X_008764)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adac03032
]
96089086 (ACET3X_008764)
03036 Chromosome and associated proteins [BR:
adac03036
]
96089086 (ACET3X_008764)
03400 DNA repair and recombination proteins [BR:
adac03400
]
96089086 (ACET3X_008764)
DNA replication proteins [BR:
adac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
96089086 (ACET3X_008764)
DNA Replication Termination Factors
ELG1-RFC complex
96089086 (ACET3X_008764)
Chromosome and associated proteins [BR:
adac03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
96089086 (ACET3X_008764)
DNA repair and recombination proteins [BR:
adac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
96089086 (ACET3X_008764)
Check point factors
HRAD17(Rad24)-RFC complex
96089086 (ACET3X_008764)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_16
RCF1-5-like_lid
AAA_22
AAA_assoc_2
AAA_24
AAA_11
AAA_5
AAA_30
DUF815
AAA_19
RuvB_N
AAA_3
ResIII
Mg_chelatase
AAA_14
PhoH
DEAD
SLFN-g3_helicase
Sigma54_activat
AAA_28
bpMoxR
AAA_18
ATPase_2
AAA_7
AAA_25
nSTAND3
RNA_helicase
DNAX_ATPase_lid
ABC_tran
TniB
Motif
Other DBs
NCBI-GeneID:
96089086
NCBI-ProteinID:
XP_069304366
LinkDB
All DBs
Position
8:complement(join(2583195..2584154,2584200..2584287,2584338..2584471))
Genome browser
AA seq
393 aa
AA seq
DB search
MSDFEDEMDVDAPAVDTSITFGGDQKKGKRSAANLPVEAEDSLPWVEKYRPSSLDDVEGH
QDIIATINKFVDSNRLPHLLLYGPPGTGKTSTVLALARRIYGNKNMRQMVLELNASDDRG
IDVVREQIKTFSSTKQIFSAAPKAGDSSLATFKLIILDEADAMTATAQMALRRIMEKYTA
NTRFCIIANYTHKLSPALLSRCTRFRFSPLKDQDIRHLVDKVIDEEKVNITQDATDSLVT
LSKGDMRRALNVLQACHASSTPLQTPGKPAPDSSTIVRDQITQTTIYDCIAAPHPSDIKY
IIETLLSKNDMTECLRTVNNLKIMKGLALADILTAISDELVSNDVPPQVMVTWMAGLADI
EYRLSGGGSEAIQTGAAIGVVRTGVELLETGKK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcgaggatgagatggacgtggacgcgcccgcagtagacacctccatcact
tttggcggagaccagaagaagggcaagaggagcgctgcaaacctgccggttgaggctgaa
gactctttgccatgggtagaaaagtacaggccaagctcgctggatgacgtcgaaggccac
caggacataatcgccaccatcaacaagtttgtagactcaaatcgactgccccatctcctc
ctctacggccccccaggtaccggaaagacgtcgaccgtcctcgccctcgcacgccgcata
tacgggaacaagaacatgcgacagatggtcttggagctcaacgcatcagacgatcgaggt
atcgacgtcgtgcgcgagcagatcaagacattcagtagcacaaagcagatcttctctgcc
gcacccaaggcaggagactcatcgcttgcgacgttcaagctcatcatcctagacgaggca
gatgccatgactgcgactgcccagatggccctgcgacgcatcatggagaagtacaccgcc
aacacccgcttctgcatcatcgccaactacacacacaaactctcgcccgccctgttatcg
cgatgcacgaggttcaggttctctccgctaaaagaccaggacatcaggcatctagtggac
aaagtcatcgacgaggaaaaggtcaacatcacacaagatgccaccgactcgctcgtcaca
ctcagcaaaggagacatgaggcgcgcacttaacgtactgcaggcctgccacgcatcaagc
acgccgctccaaacaccaggcaagcccgcacccgactcgagcaccatcgtacgcgaccag
atcacgcagactaccatttacgactgcatagcagccccgcacccctccgacatcaagtac
atcattgagacgctgctatccaagaacgacatgacggagtgtttgcggacagtcaacaac
ctgaagatcatgaagggtcttgcgctggcagatatcctcacggcgatcagcgatgagctc
gtcagcaacgacgttccaccgcaggttatggtgacatggatggcgggtctggcagacatc
gaatacaggctgagcggaggtggaagtgaagccatccagacaggcgccgcaatcggcgtt
gtaaggacaggcgtcgagttgttggaaacgggcaagaagtag
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integrated database retrieval system
