Alternaria dauci: 96089131
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Entry
96089131 CDS
T10615
Symbol
ACET3X_008809
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
adac Alternaria dauci
Pathway
adac03030
DNA replication
adac03410
Base excision repair
adac03420
Nucleotide excision repair
adac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
96089131 (ACET3X_008809)
03410 Base excision repair
96089131 (ACET3X_008809)
03420 Nucleotide excision repair
96089131 (ACET3X_008809)
03430 Mismatch repair
96089131 (ACET3X_008809)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adac03032
]
96089131 (ACET3X_008809)
03400 DNA repair and recombination proteins [BR:
adac03400
]
96089131 (ACET3X_008809)
DNA replication proteins [BR:
adac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
96089131 (ACET3X_008809)
DNA repair and recombination proteins [BR:
adac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
96089131 (ACET3X_008809)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_33
RuvB_N
nSTAND3
AAA_16
AAA_14
AAA_28
AAA_5
NACHT
AAA_18
Motif
Other DBs
NCBI-GeneID:
96089131
NCBI-ProteinID:
XP_069302886
LinkDB
All DBs
Position
9:join(119745..119908,119956..122748,122810..123155)
Genome browser
AA seq
1100 aa
AA seq
DB search
MPADIRSFFGGGPPKGSQDAKKKDEPAPKKAAPKKKGRASRVVEDSDDEDEEDAKPKKTT
PKKPAAKKFKREPTPEPVLEETTTSDFFASSNKPKRTEPVKKAAAEPATTPKKAPAKANG
KASKAAAPSSNAKTSGRAKKPVTSYAERDDEDEFPDDDLDDADDIFEDNIKGKGKDDYKE
EPESDDDVPVQLPHRGTPKVPAKQQKTIKDEDEDDFDPEDEDVDMKDIDAEDDFIEPDED
EHAVKSKPKKTSNAGKKRKSPVSDEEEEDEEDEKPKKKAPKKAAPAKSPAKKKAKKEDVE
DSADIQAIYDSIPTVRAPTPPPKDENSKFNWQANAGRSDAAPTGGSSGDMPQGSDTCLAG
LTFVFTGVLQRWGRTEAQELVKRHGGKVTGAPSKKTSYVVLGTDAGPSKLQKIRDMNIKT
IDEDGLTQLIEKLTAAGNKGDSKAQAEYAEKQRKEQEKIEKQAAELEQEERKRQKEQAAA
AAAASKKSGSAVPAAAPSAGPAVDSRLWTTKYAPTSLSQICGNKATVEKIQRWLQAFPKN
LKTGFKLAGKDGSGVFRAIILHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKKLIED
GLRGVLSTNSLHGYFAGDGKQVEGSKKKLVLIMDEVDGMSAGDRGGVGALAAVCKKTEIP
MILICNDRKLPKMKPFDYVTYDLPFRRPTVDQVRSRVMTIAYREGLKLPPTVVNALIEGS
HSDIRQVVNMISTAKLDQEAMDFDKGKTMSKNWEKHVILKPWDITQKILGGGMFASSSKA
TLNEKIELYFNDHEFSPLMLQENYLGTNPILSGQYGGKEKNLKNLELVSQAADSISDGDL
VDRMIHGSQQQWSLMPTHAVFSFVRPASFVSGSTAGNGTRFTSWLGKNSTTNKLSRMIKE
IQAHMRLRSSGDRHEVRQQYVPLLWHDLVNKLQKEGKEAVSEVIELMDSYYLTKDDFDAI
MELGVGPMDQEKVKIDSQTKATFTRLYNQQSHPLPFMKASSVTAPKGKQAKEKPDLEEAI
DESDDGEVIEEAQDEEEDVDLSKDKYVKQPKKKAAPKKAAAKKGGKKKKDDDDDVEDDED
EDVKPKGKAKAKAAPKGKKK
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgacattcgcagcttctttggcggcggacccccaaagggcagccaggacgca
aagaagaaggatgagcctgcgccgaaaaaggccgcacccaagaagaagggacgcgcaagt
cgggtcgtagaagactctgacgatgaggatgaggaggacgcgaaacccaagaagaccacg
ccaaagaagccagccgcgaagaaattcaagcgcgaaccgaccccagaacccgtactcgag
gagacgaccacatccgatttctttgccagctcaaacaagcccaagcgaaccgagccggtc
aagaaagctgcggccgagccggccacaacaccaaagaaggcgcccgcaaaggcaaacggg
aaagcatccaaggcggctgctccgtcatccaatgcaaaaacatctggtcgcgcaaagaag
cctgtcacgtcctatgccgagcgggacgacgaagacgagttcccagacgatgacctagac
gacgcagacgacatcttcgaagacaacatcaagggcaagggaaaggacgattacaaggaa
gagccggagagcgacgacgatgtgcctgtgcaattgccacatcgcggaacaccgaaagtg
cccgctaagcagcaaaagacgatcaaagacgaagacgaagacgatttcgatcccgaagac
gaggatgtcgacatgaaggatattgatgcggaggatgactttattgagcctgacgaagat
gagcatgcggtcaagagtaagccaaagaagacgtcgaatgcaggcaagaagcggaagtca
cccgtgtcagatgaggaagaggaggacgaggaggacgaaaagccgaagaagaaagcaccg
aagaaagccgctccagcgaaatcgccggcgaagaagaaggcaaagaaggaggatgttgaa
gacagcgcagacatccaggccatctacgacagcattcctaccgtgcgtgcacctacaccg
ccacccaaagatgaaaactccaaatttaattggcaggcaaacgcgggccgcagcgatgct
gcgcctaccggggggtcatctggcgacatgccacagggctcagatacatgtcttgcaggt
cttacgtttgtgtttactggcgtgttgcagcgatggggtcggacagaagcacaagagctg
gtcaagcgacacggcggaaaggtcactggtgctccaagcaagaagaccagctatgttgta
ctaggcacagatgctggtcctagcaaactgcagaagattcgagacatgaacatcaagaca
atcgacgaagatggactgacacagctcattgagaaactgacggcagctggcaacaagggc
gacagcaaggctcaagcagagtatgctgagaagcagcgcaaagagcaggagaagattgaa
aagcaagctgccgagctcgaacaggaagagaggaagcgtcaaaaagagcaggcggcggca
gctgcagcggccagcaagaaatcgggttcggcagtcccagctgctgctcccagtgcgggt
cctgctgtcgactcgcgattatggaccaccaagtatgcgcccacatcactctctcagata
tgcggcaacaaagcaacagtcgagaagatacaacgctggctgcaggccttcccgaagaac
ctcaagactggtttcaagttagcgggtaaagatggtagtggtgtgttccgcgccatcatc
ctgcatggtccacctggtatcggcaaaactactgcagcgcatcttgtcgcaaagctcgag
ggatacgacattgttgagaggaacgccagtgatacccgaagtaagaagctgatcgaggat
ggtttacgtggcgtcctcagcaccaactcactccacggatactttgctggagacggaaag
caggttgaaggatcaaagaagaagctcgttctcatcatggacgaggtcgacggcatgtct
gcgggtgaccgcggcggtgttggtgcgctcgcagccgtctgcaagaagacggagattccc
atgatcctcatctgcaacgacaggaagctgccgaagatgaagccgttcgattacgttacc
tatgacctgcccttccgacgtcccactgtcgaccaggtacggtcgcgcgtcatgactatt
gcctaccgagaaggcttgaagctgcctccgactgttgttaatgcactcatcgaaggcagt
cattccgatattcgccaggttgtcaacatgatttctaccgccaaactcgaccaggaagcc
atggatttcgataagggcaagaccatgtccaagaactgggagaagcatgttatcctgaag
ccgtgggatatcacacagaagattcttggcggcggcatgtttgcctcgagcagcaaagcc
acgctgaacgagaagattgaactctacttcaacgaccatgagtttagtccgttgatgctg
caggagaattacctcggcacgaatcctattctttccgggcagtacggaggcaaagagaag
aatctgaagaatcttgagctggtatcgcaagccgcagatagtatcagcgacggtgatctt
gtcgatcggatgatccacggctctcagcaacaatggagtctaatgcctacccacgcagtc
ttcagctttgtccgccccgccagtttcgtctctggtagcacagccggaaacgggacgcga
tttacttcgtggctaggcaagaacagtactaccaacaaactcagtcgcatgatcaaggag
atccaagcacatatgcggttgcgctcttctggcgaccgccacgaagtccggcagcagtat
gtcccgcttctctggcacgacttggtaaacaagctgcagaaggaaggaaaggaagctgtt
tccgaggtcatcgagctgatggatagctactaccttactaaagacgactttgacgcgatt
atggagttgggagttgggccgatggatcaggagaaggtcaagattgatagccagaccaag
gctacctttacacgactgtataatcaacaatcccaccctctccccttcatgaaggcatca
tccgtcacggcgccgaaaggcaaacaagcaaaggagaaaccagatctcgaggaggcgatt
gacgagagtgatgatggagaggttatcgaggaggcccaggacgaagaagaggatgttgat
ctgagcaaggacaagtatgtcaaacagcccaagaagaaggcggcgcctaagaaggcggcg
gcgaagaagggagggaagaagaagaaggatgacgatgacgatgtggaggatgacgaggat
gaagatgttaagccgaagggcaaggccaaggccaaggctgcgcccaaggggaagaagaag
tga
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integrated database retrieval system
