Alternaria dauci: 96089414
Help
Entry
96089414 CDS
T10615
Symbol
ACET3X_009092
Name
(RefSeq) hypothetical protein
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
adac Alternaria dauci
Brite
Enzymes [BR:
adac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
96089414 (ACET3X_009092)
5.6.2.5 RNA 5'-3' helicase
96089414 (ACET3X_009092)
Transcription machinery [BR:
adac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
96089414 (ACET3X_009092)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
96089414
NCBI-ProteinID:
XP_069303169
LinkDB
All DBs
Position
9:complement(join(1210993..1213036,1213089..1216949,1217043..1217068))
Genome browser
AA seq
1976 aa
AA seq
DB search
MAEILEKINELRELPEEQHLFCPRIGDDGSVYYDEDVAAYPPENDPNELADRKLKLLAAQ
DRKWTALKAAEILAFDGDEAAPHKEWLVNRLNSLMQSCDVCVRVFHQSRAEWRTRLIDSY
DEENIGDFLQVVDNQCLGRIQKGLDEANEILSKAEPKTRSVRLLPNECTYGFFEALSCDA
LIRNEELLQRHFDAPFDMVQTKKRLKIQTYLPAMTRFLFTRVDRRHKWATESWSTFKRNV
LKSEWEWAVRDYVTSVMMKVQMSNLDLSVVPLFWGGMRLIVAKMDRELITDSLRGLDGDF
YRLMLDHLSLKSEGFLDLIATMKQLLEKSPVDYWEGMNAVTSSIATVVEQVFNSPVLNQL
LLATADGNEQNMNNLHAAFSWIPIFLDSIKVSNLGPAVRPFVHALLGRFQSDRYPPVARA
YCYKEGLKVLDYTFRKMGEGKGADKFVGQPTVNGMLDLLSTFIQSLVTTLKNLKYNKENQ
EDMQLTLSVIEHAFKLEAQSLIVERQLISANVPSPTQTPPSSPIWKTVLRAIGPDSLELA
THLLIAGRGLIGLEPLQMKSGVDKVPPEVRHFNDRFRLLSQSITDVVEKMSEFEPTLLQA
LFGQQPAASAIVSLMFSSTEDTRNSAIELLKVISGEDERRGALQHILRAHYRHVVRGISD
SVRQVRLKKAFAPAPSVIRTCTDIIDIICNPQDGILRGREYDSGDAAATMYLWENLWDSL
TMIFATTEAWSNLGFYDKHMMMDFCRDTMQFADVLFDQCSIFATALKPPSSDEEEATSKT
ALLKELLAQPANAMEGLAKWLRLRDEFLSSKSVTLISKLLIRLHRVSIEIDPNALSYMER
VLSGDVRAKLSDTQQAELQQALEEHLGRPLVKEEEPAKPKQAMISKWMAPGATQTPADAK
AKLLASMTAGSSKFQERREQMRAAEVKAAQQKALDDKKSAQQAEFKRKRQLALQQREKEK
AAAIAKLKAARGVSNHVAEAGSGLEGLGVLGKDQAAKGEGLMHSSDESSDEGDIDEDLFG
IKKTKIKTGPKTNIVNEVKIQMPTKKKRAQRSAKDMRARLAPDLSSLHRTILSWNYFHEG
PFPPKSRPDMYSKVLSTFRTPNDYQNTFEPLLTLEAWQGFVKAREENQAKPYEIRITSRA
AVDMFQEVGSTMTHVENKDVFISEGDIILFAKSKSPSADEPTCLARVFRVKRKQQHIEVS
YRVVPGNPLSTALQPNNTILGFKLESITSLEREYGALKGLQYYDLCDEIIRAKPSPLLTY
KDSQIQPLISNYNVNPAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAILSDSLRN
RGTAIAVPGQTNSNAAQKKLLVCAPSNAAVDELVMRFKDGIKTLNGESRKLNIVRLGRGD
AIKASVQDVTLEELVNKRLGVDSSNGNDREATQKLFQEHKQVSDQLKQAYQQRDTGEIKG
EAAAKLDDDINALRRRKTALGTKIDNVKDDEKLASRNADLNRRRAQEAILNDAHVICATL
SGSGHEMFQGLSIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSDKA
KGFQYEQSLFVRMQKNHPDDVHLLDTQYRMHPEISLFPSRTFYDGRLLDGDDMAGLRQRP
WHQSMLLGPYRFFDVQGQHQAAPKGHSLINIAEINVAMQLYKRVTSDYPEYDFKGKIGII
TPYKSQLRELKQRFMNAYGQSIIEDIDFNTTDAFQGRESEIIIFSCVRASPAGGVGFLQD
IRRMNVGLTRAKSSLWVLGNSDSLMRGEFWKKLIVDAKERKRFSAQDVPKMLNQHSSKFP
APKEGYVQPHRPTSEVKPEVKPEVKLEVKSEPMSRSASNQSSTSSGSDSKSIKQEIKREI
NNEQILVHHEKRKFQDIASLDKIKLESSDAEMDDAPSDSASNTMNGGSGRSTPAANADAS
RKSSTPSGETSNGTSGAVAPPPGDVIGGMSMAKPKIRRRPREPPNPFIKNKKPRNG
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atggcggagattctcgagaagataaatgagctccgggagctacccgaagaacagcacctg
ttctgtcctcgcattggcgacgacggatcggtatactacgatgaagacgttgctgcgtac
cctcccgaaaacgatcccaacgagctcgccgaccgcaagctcaagcttctagctgctcaa
gaccggaaatggacagccctcaaggcagccgagatattggccttcgatggagacgaggca
gcaccacacaaggaatggctcgtcaaccgcctcaacagcctcatgcagagctgcgatgtc
tgcgtgagagtcttccaccagagcagagcagaatggcggacacggctgattgattcttac
gacgaggagaatattggtgacttcctacaagtcgtggacaaccaatgcctgggtcgcata
caaaagggcttggacgaagcgaacgagatactgagcaaagccgaaccgaagacgcgctca
gtccggctgttgcccaacgaatgcacatatggcttcttcgaagcgcttagctgcgacgcc
ctaatacggaacgaagaactcctccagcgacatttcgatgcaccgttcgacatggtccaa
acgaagaagcggttaaagattcagacgtaccttcctgctatgacccgcttcttattcact
agggtggacagacggcataaatgggcgacagagtcctggtccaccttcaagcgtaacgtt
ctcaaaagcgagtgggaatgggctgtaagagattacgttacaagtgtcatgatgaaggtc
cagatgagcaatttggatctatccgtggtacccctcttttggggcggcatgcggctcata
gtagcaaagatggacagggagctgatcaccgactcattgcgcggccttgacggagacttc
taccgtctgatgcttgaccacctttcactgaagtccgaaggctttctggatctgattgca
accatgaagcagttactggaaaagtccccggtcgattactgggaaggcatgaatgctgtg
acttcttcaatcgctacagtagtagaacaagtgttcaacagcccagttttgaatcaactc
cttctcgccactgcggatggaaacgaacaaaacatgaataacctccacgctgccttcagc
tggattcccatcttcctggactccatcaaggtatccaatctcggaccggccgtccgccca
tttgtacacgcgttgcttggtcgcttccagtctgatcgctatcctcccgtcgctcgagcc
tactgctataaggaaggactcaaagtattggattatacctttcgaaaaatgggagaaggc
aaaggcgccgacaagtttgttgggcagccaaccgtcaatggcatgctggatttgctgtca
accttcatacagtctctcgttacaactctcaagaacttgaaatacaacaaggaaaatcag
gaggatatgcaactgaccctttcggtgattgagcatgcgttcaagctggaagcacagtcc
ctcatcgtcgagaggcaacttatctctgcgaatgtaccgtcgcccacccaaacaccgccg
tccagtcctatatggaagacagtcctacgagcaataggcccagatagcttggagcttgcc
acgcatcttctcattgctggcaggggcttgatcgggctggaaccactccaaatgaagtcg
ggtgtcgacaaggtacccccagaggtacgccacttcaatgatcgattccggttgctctct
caatcaatcaccgatgtcgtggagaagatgtcggaatttgaacccacactgttacaagct
ttgttcggacagcaacccgcagcgagtgccatcgtctccctgatgttttcgtccacagaa
gatacccgcaactctgccatcgagctgttgaaggtcataagtggagaagacgaacgtcgt
ggcgctctgcaacatatcttgagggcccattatagacacgtcgttcggggtatctcggat
tcagttcggcaagttcgactcaagaaagcgttcgctccagcaccaagtgtgatccgaaca
tgcacagatatcatcgacatcatttgcaaccctcaagacggaatcttgcgaggccgcgag
tatgattctggtgatgctgcagcgacaatgtatctatgggagaacctttgggattcactt
acgatgatcttcgccactactgaagcctggagcaacttgggcttctacgacaaacacatg
atgatggacttttgccgagacactatgcaatttgctgacgtgctgttcgatcagtgcagc
atctttgccacagccctgaagccaccttcttccgatgaagaagaagcaacatcaaagacc
gctctactcaaagagcttttggcacagccggcgaatgccatggagggtctggccaaatgg
cttcgtcttcgtgacgagttcttgtctagcaagtccgtcactttgatcagcaagcttctt
attcggctacaccgtgtgtctatcgaaatcgatcccaacgctctttcgtacatggaacga
gtgctctcaggagatgtccgtgcgaagctgagcgatacacaacaggctgagctgcaacaa
gcgctcgaagagcatcttggccgcccacttgtgaaggaagaggagcccgcaaaacccaag
caggccatgatcagcaaatggatggccccgggtgcgactcaaacaccagcagatgccaaa
gcaaagttgcttgctagtatgactgctgggtcgagtaaattccaggaacgacgggagcag
atgagagcagctgaagtcaaggctgctcaacaaaaagctctcgatgataagaagagtgcc
caacaagccgagttcaagcgtaagcggcagcttgcactacaacaacgagagaaagagaag
gctgctgcgatcgctaagctgaaagcagctaggggcgtctccaatcatgttgccgaagcc
ggctcaggccttgaagggctaggtgtgttgggcaaagaccaggctgcaaagggagaaggc
ttgatgcattcttctgatgaatcatcagacgaaggtgacattgatgaagatctctttggc
atcaagaagaccaaaatcaagactggacccaagacaaacattgttaatgaagtcaagatc
caaatgccgacaaagaaaaagcgggctcaacgttctgccaaagacatgcgtgctcgtctg
gcgcctgatctgagcagccttcatcgaactattcttagctggaactatttccacgagggc
cccttcccacccaagtcccgacccgacatgtattccaaggtcctcagtaccttccgcaca
cccaacgattaccaaaataccttcgaaccgcttctgaccctagaagcatggcaaggtttc
gtcaaagctcgtgaggagaaccaagctaagccatatgagataagaatcacttcacgagct
gctgtcgacatgttccaagaagttggcagtacgatgactcatgtcgagaacaaggatgtg
ttcatctccgaaggtgacatcatactctttgcaaaatccaaatcaccctctgcggatgag
ccaacatgtctcgccagggtgttccgcgtaaagaggaaacagcagcacatcgaggtctca
tatcgtgtggtacctggcaaccctctctcaactgcgctgcaaccaaacaatacgattctg
ggcttcaaactcgagtcaatcacatctttggagcgcgagtacggtgcgctgaaaggtctt
cagtattacgatttgtgtgacgagatcatccgcgcgaagccctctccacttttgacctac
aaggatagccagatccagccactcatctctaattacaatgtgaatccggcgcaagcaaaa
gccatcaaatccgccatcgacaatgatgcgttcaccttgattcaaggaccgcctggttcc
ggaaagacaaaaaccatcactgctatcgtgggagctatcctgagcgacagtcttcgaaac
cgcggtaccgcgattgccgtccccggccaaacaaactcaaatgctgctcagaagaagttg
ctggtttgcgcgcctagtaatgcggccgtggacgagttggtcatgcgtttcaaagatggt
atcaaaactctcaatggcgagtcgcgcaaactcaacatcgtacgcttaggtcgcggagac
gccatcaaggccagtgtgcaggatgtgacactagaagagcttgtcaacaagcgcctaggt
gttgattcatcgaacggcaacgatcgagaagcgacacagaagctcttccaggagcacaaa
caggtctctgatcaactgaagcaagcctatcagcagcgagatactggtgagatcaaagga
gaagctgcggccaagctagacgacgacatcaacgcgttacgcaggcgtaaaacagccttg
ggaacgaagatcgacaatgtcaaggatgacgagaagcttgcaagtcgtaacgcagacctg
aacagacgacgcgcacaggaagcaattctgaacgacgcccacgttatctgtgcgacactc
agcggttctggacatgagatgttccaagggctaagcattgagttcgaaactgtcattgtc
gacgaggctgcccagtgtgttgagatgagcgcacttattcccctcaagtacggttgcgcc
aagtgtatcctggttggagatccaaagcaacttcctccaactgtcttctcggacaaggcg
aaaggtttccaatacgagcagagtttgttcgtccgcatgcaaaagaatcacccagacgat
gtgcatctattggacacacaatatcgtatgcacccggaaatcagtctgtttcccagtcga
acgttttacgacggccgactcttggatggcgacgatatggctggtctacgccagcgacca
tggcatcagagtatgttgctcggaccttaccgcttttttgatgtccaaggtcaacaccaa
gctgctccaaagggccattcgcttatcaatattgccgagatcaatgtcgcgatgcaactg
tacaaacgagtcacttccgactatcccgaatatgattttaaaggcaagattggcatcatc
acaccttacaagagccagctgcgagagctgaaacagcgcttcatgaacgcatatggtcag
agtattatcgaggacattgatttcaataccacggatgctttccaaggccgtgaaagcgag
atcatcatcttctcctgcgtacgagcctccccagcaggtggcgttggtttcctccaggac
attcgccgtatgaacgttggtctcacgcgtgccaaatcatctctatgggttttggggaac
tctgactcgctgatgcgaggagaattctggaagaagcttatagtagacgcgaaggaaagg
aagcggttttctgctcaagacgtgccaaagatgctgaaccagcattccagtaaattcccg
gcaccaaaggaaggttatgtacagcctcaccgtcccacatcagaggtcaagccggaggtc
aaaccagaagtcaaactagaagtgaagtcggagcccatgagcaggtctgcaagcaaccag
tccagtacatcttcgggctcggactcgaagtctatcaaacaagagatcaagagggagatc
aacaacgaacaaatactggtacaccacgaaaagcggaagttccaagacatcgccagtctt
gacaagatcaagcttgagagtagcgatgccgagatggacgatgcgccatctgactctgcc
tctaataccatgaacggaggcagtggtcgatcaacacctgccgctaatgccgatgcgtcg
cgtaagagctcgacgcctagtggggagacaagcaacgggacgagtggtgcggtcgctccc
ccacctggagatgtcatcggtggcatgtcgatggcaaaacctaaaattcgtaggcggcct
cgtgaaccaccaaaccctttcatcaaaaataagaagccaaggaacggctaa
DBGET
integrated database retrieval system
