Alternaria dauci: 96089458
Help
Entry
96089458 CDS
T10615
Symbol
ACET3X_009136
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
adac Alternaria dauci
Pathway
adac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
96089458 (ACET3X_009136)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adac03021
]
96089458 (ACET3X_009136)
Enzymes [BR:
adac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
96089458 (ACET3X_009136)
Transcription machinery [BR:
adac03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
96089458 (ACET3X_009136)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
96089458
NCBI-ProteinID:
XP_069303213
LinkDB
All DBs
Position
9:complement(join(1342466..1346807,1346861..1346943))
Genome browser
AA seq
1474 aa
AA seq
DB search
MEAPRTSAKQQVVDRIPARIKHIQFGIYSNQDIVNQAVLEVSDRNVYDLQPAADGTRSLT
ANGPMDTHMGISSKQGKCGTCGEGLDKCNGHFGHIKLALPAFHVGYLKHIIEVLNCICKD
CSRVLLDEVERRRYLRSMRRPDMDTLRKGAVTKKILDDCRKKKTCPYCNALQGTVRKVPG
HPLKIIHNRYDAFNRSTAKTKKPPAGKIEFDQSFDTAKSANPDLDKHLKKAVDDMHPLRT
LNLFKKISPEDCELLAMIPEDARPEMLIWEYMPVPPVALRPSVMQEGGATEDDVTNKIGD
ICQISSIIRAGLARGFPLQILMEQWDFLQLQIAMYINSDAPGLKQQGLQKTMRGFSQRLK
GKGGRFRQNLSGKRVDFSGRTVIGPDPNLSIDEVAVPERIAKNLTYPEKATRYNIDKLRR
LVKNGSNRYPGANYIISDQGPNKEPSKTSLIGLSRFDTTGERLEGASKRLKIGDIVERHI
EDGDIVLFNRQPSLHKLSILSHRAKVRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEE
ARTEATELMGVKYNLATPKNGTPIIAAIQDFITAAYLLSNKNNFYDRRTFCQIVNYMFNG
EGAFDPDTGKRHPIDIPPPVVWKPQALWTGKQVFNLLMKPYKGCRVLVNLEAACKQFKNT
PGQAPDLNENDAYLVIRNSEVMCGVMDKATVGDGKKDSVFYVMMRDFGPDHAVQGMNRLS
KLSARWLSNNGFSLGISDVTPGEKLNKKKQDLVEEAYAKCDKLIKDFKEGKLQRDPGCDE
EQTMENRIGGILSGVRQAAGDICFEELSRWNSPLLMAKCGSKGSNINVSQMVASVGQQMI
GGARVADGFHHRTLPHFPKAARQPASKGFVSNSFFSGLTPSEFIFHAMSGREGLVDTAVK
TAETGYMSRRLMKSLEDLSAQYDDTVRNSSGTVVQFQYGDDNLDPVDMEGKAKPVHFDRT
FSHAVTSTWDNSESGLTPDEVKEYTEARLNTERNKYPRYKLDGVTPLEYRDRTDAGIDQK
ESMRDFLDTVQDYVFKKAQKLETTLAYLGIVQPDGRNDRKQSAADAEKYSLADGIAKISH
SALDTFITLCLTKYHRSRVQPGHAVGAIGAQSIGEPGTQMTLKTFHFAGVAGMSITQGVP
RIKEIINASSTISTPVIACDLSNKVSESAARIVKARVEKTYLRDVISYVEDVWHPTGAYI
AMRIDWDTINKLFVDVQPHEIAAAINAHKPLKWGKAGAQVRISSSIIRVEVPDPNAAKKR
PTKTTRNHKEFFERVQQVKALIPDVVIKGYQDCSRAIIKKESSPNAQGQYECQLLVEGYG
LRDCMTTPGIEPYSTKSNHVMEVKTVLGIEAARATIVREIGDVMGNMDIDPRHMQLLADV
MTFKGEVFGITRFGLQKTRDSVLQLASFEKTPDHLFEAAARGKTDTIDGVSECIIMGQSV
KLGTGSMQVVRPLYLGAEDLKVKKTMFEEGWDAL
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgcgcacctcggccaagcagcaggtcgtggaccgcatccccgcgcgcatc
aagcacatccagttcggcatctactccaaccaggacattgtcaaccaggccgtcctcgaa
gtctcggaccgcaatgtctacgacctccagcccgccgccgacggcacgcgctccctcacg
gccaacgggcccatggacacgcacatgggcatctcgagcaagcagggaaagtgcggaacg
tgcggagagggcctggacaagtgcaacggccactttggccacatcaagcttgcgctgccc
gcattccacgtcgggtacctgaagcacatcatcgaggtgctcaactgcatctgcaaagac
tgctcgcgcgtactgctggacgaggtggagcgccgccgatacctgcgcagtatgcgccgc
cccgacatggacacgctgcgcaagggcgccgtcaccaagaagatcctcgacgactgcagg
aagaagaagacgtgcccgtactgcaacgccttgcagggcaccgtccgaaaagtacccggc
catcccctcaagatcatccacaaccgatacgacgccttcaaccgatccacagccaagacg
aagaagccgccagccggcaaaatcgagttcgaccagtcctttgatactgcaaagtcggcc
aacccagacctagacaagcacttgaagaaggcggtagatgacatgcatccgctgaggacg
ctcaacctattcaagaagatctcccccgaggactgcgagctgctagccatgatacccgag
gacgcccggcccgaaatgttgatctgggagtacatgcctgtaccgcctgtggcgctacgc
ccgtcagtcatgcaggaaggcggcgccaccgaggacgatgtgaccaacaagattggagac
atctgccagatcagcagtataatacgcgccggtcttgcgcgaggctttccgctccagatc
ctcatggagcagtgggatttcctgcagctgcagattgccatgtacatcaacagcgacgcg
cctggtctgaaacagcagggcctgcagaagactatgcgcggtttctcgcagcgcctcaag
ggaaagggtggtcgtttccgacaaaacctctccggaaagcgtgtcgacttttctggccgc
actgtcattggtcctgatccgaacttgagcattgacgaggtcgctgttccggagcgcatt
gcgaagaaccttacgtaccccgaaaaggccacgcgatacaacatcgacaagctgaggaga
cttgtgaagaacgggtccaacagatatcccggtgccaactacatcatcagcgaccaaggg
ccgaacaaggagcctagcaagacgtcactcattggtctctcgcgattcgatacgactggt
gagcgactagagggcgcctcgaagcggctaaagattggcgacatcgtcgagcgccatatt
gaggacggcgacattgtcctcttcaatcgacaaccgtccctacacaagcttagtattctg
agtcatcgagcaaaagtacggccatggaggacgttccgactcaacgagtgtgtttgcaat
ccgtacaacgccgatttcgatggtgacgagatgaacttgcacgtaccacagaccgaggag
gcgcgaaccgaagctacagagctcatgggtgtcaagtacaaccttgcaactccaaagaac
ggaacaccaattattgcggccatccaagatttcatcaccgcggcataccttttgagcaac
aaaaacaacttttacgatagacggacattctgtcagatcgtaaactacatgtttaacggg
gaaggagcttttgatccagatacaggaaagaggcaccctatcgacattccgcctcctgtg
gtgtggaagcctcaagcactttggaccggaaagcaggttttcaatcttttgatgaagcca
tacaagggctgtagggtcctggtcaacctcgaagctgcatgcaagcagttcaagaatacc
cctggccaggctcccgatctgaacgagaacgacgcttatcttgttattcgcaattccgag
gtcatgtgcggtgtcatggacaaggccaccgttggtgatggtaagaaagattcggtcttc
tacgtcatgatgcgagactttggtcccgaccacgccgtccaaggcatgaacagactgtcc
aagttatccgcgcgatggctatccaacaacggtttctctctcggtatttccgacgttacc
cctggagaaaagctcaacaagaagaagcaagacctcgtggaagaagcctacgccaagtgc
gacaagctgatcaaggacttcaaggagggaaagctgcagcgcgatcctggttgcgacgaa
gagcagacaatggagaacaggataggtggtatcttgtctggtgtgcgtcaagcggctggt
gacatttgtttcgaagagctcagcagatggaactcgcccttgctcatggccaagtgcggt
tccaagggttccaacattaacgtttctcagatggttgcttccgtcggacaacaaatgatt
ggcggtgctcgtgtcgccgatggattccaccatcgaacactacctcactttcccaaagcc
gctcgtcaacctgcctcgaagggtttcgttagcaacagtttcttctcgggactgacacca
tcagaattcatcttccacgctatgagtggtcgtgaaggtttggtcgatacagctgtcaag
accgccgagactggttacatgagtagacgattgatgaaatcattggaagatctttctgca
caatacgatgataccgttcggaactcgtctggtaccgtagtgcagtttcagtatggagac
gacaacctcgatcccgtggacatggagggcaaggccaaacccgtgcactttgacaggaca
ttctcacatgccgtcacgtcgacctgggacaactctgaatcgggcttgacccccgacgaa
gtcaaggagtatacagaagcaaggttgaacaccgaacgaaacaagtacccaaggtacaag
ctagacggtgtaacgccgctggagtatcgcgataggaccgacgccggcatcgaccagaag
gagtccatgcgtgattttctcgacacggtgcaagactacgttttcaagaaggcacagaag
ctcgagacaacacttgcttatctcggtatagtacagccggatggcagaaatgacaggaaa
cagtcagcagccgatgcagagaagtacagtcttgccgatggtatcgcgaagatttcacat
agcgcactggacaccttcataacactctgtctgaccaaataccatcgatcacgagtacag
cccggtcatgctgtaggagccattggtgctcagtctatcggtgaacccggaacgcaaatg
acgctaaagactttccattttgctggtgtcgccggtatgtccatcactcaaggtgtacct
cgtatcaaggaaatcatcaacgcctcctccaccatatcaacacctgtcatcgcatgcgac
ctttcaaacaaagtctcagaatctgcggcgcgaattgtcaaggcgcgtgtcgaaaaaacc
taccttcgcgacgtcatttcatatgtcgaagatgtctggcatcctaccggcgcgtacatt
gctatgcgcatcgactgggataccatcaacaagctcttcgtcgatgtccagccccacgag
atcgccgcagcgatcaatgcccacaaacccctcaaatggggtaaagctggcgcccaagtc
cgcatatcctcatccataattcgcgtcgaagtccccgaccctaatgccgccaagaagcgt
cctacaaaaacaacccgcaaccacaaagagttcttcgaacgcgtccaacaagtaaaagca
ctcatccccgacgtcgtcatcaagggctaccaagattgctcccgagccatcatcaaaaag
gaaagcagccccaacgcccaaggtcaatacgaatgccaactgctcgtggagggctacggt
ctccgcgattgtatgaccaccccaggtatagaaccttacagcacaaagtccaaccacgtc
atggaagtcaaaaccgtcctcggcatcgaagctgcccgcgcaaccattgtgcgtgaaatt
ggcgacgtcatgggtaacatggacattgatcctcgtcacatgcagctgttggccgatgtc
atgacgttcaagggcgaagtgtttggtatcacgcgtttcggtctgcagaagacgcgtgat
tccgtcttgcagcttgcgtcgtttgagaagacgccggaccacttgttcgaggcagcagca
aggggcaagacggatacgattgatggtgttagtgagtgtatcatcatgggtcagagtgtt
aagctcggaaccgggtcgatgcaagttgtcagaccactatatcttggggctgaggatctc
aaggtcaagaagaccatgtttgaagaagggtgggatgctttgtga
DBGET
integrated database retrieval system
