Alternaria dauci: 96089578
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Entry
96089578 CDS
T10615
Symbol
ACET3X_009256
Name
(RefSeq) hypothetical protein
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
adac Alternaria dauci
Pathway
adac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
96089578 (ACET3X_009256)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adac03041
]
96089578 (ACET3X_009256)
04121 Ubiquitin system [BR:
adac04121
]
96089578 (ACET3X_009256)
Spliceosome [BR:
adac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
96089578 (ACET3X_009256)
Ubiquitin system [BR:
adac04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
96089578 (ACET3X_009256)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
CH_2
Motif
Other DBs
NCBI-GeneID:
96089578
NCBI-ProteinID:
XP_069303333
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All DBs
Position
9:complement(1702957..1704999)
Genome browser
AA seq
680 aa
AA seq
DB search
MADLSIDEVNKIRLSMGLAALPGGSTPAAPASSSGLDFKAAQNGDDSDGEPASTIETREA
AASDNWKKLEEERLAKIRREERAAAIKKEREKAARFAKLEGKGLADEADVDDDLEWLKSS
KKRQKKIAKEEQMRRELEERERQALEAMQYTDKDLAGVKVGHEVDQFDDEDQILVLKDTA
VDAEEEDELEAVSLREKERLQERLDLKKRKRAYDPNDMDESGQKSILAQYDEEIEGKKSK
AFTLDGKGRTVEDVQAEVAGASKPKKVAISLDILKEDAPANDYMDISEVKMKKPKKKKSK
KSKRERVEDEDELAAMATEEPAAGDDMDLDGGEVAAPPQKKKKVFDESFVDDDDLQANLA
AQRQKALKKRKKMRPEDLARQLREEASTPQPDIMESTEDGDGALVIDETTEFVQNLGAAG
DADEEEARRKRRKSSHISEGTKSMGDIPVADEDGDVDIGQSYAEAAEAEEARNRSISRAR
STEITETGLEAEKTVDQGLGATLALLKQRGLVTQTDAEDKNALYRERQKFLADKLKAEAD
AERQRKMARERERGSARWNNMTPREREEWARKNNTSADMVESRRLAELFNKEYTPNIELK
YVDEHGRLMNQKEAFKQLSHQFHGKGSGNTKTKKQLDKIAAEKKRMAESSLEASRSGGGG
LGNAFDDQAKKKGTAGVRLQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggccgatctatccatcgacgaggtgaataagattcgtctgtccatgggactcgccgca
ctgcccggtggaagtacccccgcagcacccgcatcgtcctcaggtctcgatttcaaggct
gcgcaaaatggcgacgactcggacggagagcctgcgagcactatcgagacgcgcgaggct
gccgcttcagacaactggaaaaagctagaagaggagagactggccaagataagacgagag
gagcgcgccgctgcgatcaagaaggagcgcgaaaaggcggcgcgctttgcgaagctcgag
ggcaaggggctggcggacgaagctgatgttgacgatgacttggaatggctgaagagcagc
aagaagcgtcagaagaagatcgccaaagaagaacagatgcgcagggagcttgaagagcgc
gagcgccaggcactcgaggccatgcagtacaccgacaaagaccttgcaggtgtcaaagtc
ggacacgaggtcgatcagtttgacgatgaggatcaaattcttgttctcaaagatactgcg
gtcgacgcagaagaagaagacgagctagaggcggtttcgctgagggaaaaggagcgacta
caagagcgactcgatttgaagaagcggaagcgcgcatacgaccccaacgacatggatgaa
tcaggccaaaagtcgatactggcacaatacgacgaagagatcgagggcaagaagagcaag
gctttcacgctggacggcaagggccgaactgttgaagacgtacaggccgaggttgcaggt
gcctcgaagccaaagaaggttgctatcagtctggacatactcaaagaagatgcgcctgcg
aatgactacatggacatttcagaagtcaagatgaagaagcccaaaaagaagaagagcaag
aagtccaagagagaacgcgtcgaagacgaagacgaactagcagccatggccacggaagag
cctgctgctggcgacgatatggatctcgatggcggtgaagtcgcagcaccaccgcagaag
aaaaagaaggtctttgatgagtctttcgtggatgacgacgatctccaggcgaatctcgca
gcacagcggcaaaaagccctcaagaagcgcaagaagatgcgaccggaagaccttgcacgg
caattgcgcgaggaagcatctacaccccaaccagacattatggagtctactgaggacggc
gacggtgctcttgtcatcgacgaaacgaccgagttcgtacaaaatctaggtgctgctgga
gacgccgacgaagaggaggcccgccggaaacgcagaaagtccagccacatttctgaaggc
accaagtctatgggcgatatcccagttgccgacgaagacggcgatgtcgacatcggacag
tcttatgcggaagcagccgaagccgaagaggctcgcaaccgcagcatttctcgcgctcgg
tctactgagattactgagactggtcttgaggccgagaagactgtcgaccaaggtctgggt
gccacactcgccctgctcaaacaacgaggcctggtcacacagaccgacgccgaagacaag
aacgccctgtatcgtgaacgccagaagttccttgccgacaagctcaaggctgaagccgac
gcagaacgccaacgtaagatggctcgtgaacgcgaacggggctctgctcgctggaacaac
atgactcctcgcgaacgtgaagaatgggcacgcaagaacaatacgagtgccgacatggtt
gagagccgtcgccttgctgagctcttcaacaaggagtacacacccaatatcgaactcaaa
tatgtcgatgaacacggccgcctcatgaaccagaaagaagcgttcaagcagctcagtcat
cagttccacggcaaaggcagtggaaatacgaagacgaagaaacaacttgacaaaattgct
gctgaaaagaagaggatggctgagagttcgctcgaggctagtcggagcggaggtggtgga
ttggggaatgcgttcgacgaccaagcgaagaagaagggtactgctggtgttcgtctgcaa
tag
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