Alternaria dauci: 96089682
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Entry
96089682 CDS
T10615
Symbol
ACET3X_009360
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
adac Alternaria dauci
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adac03021
]
96089682 (ACET3X_009360)
03036 Chromosome and associated proteins [BR:
adac03036
]
96089682 (ACET3X_009360)
Transcription machinery [BR:
adac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
96089682 (ACET3X_009360)
Chromosome and associated proteins [BR:
adac03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
96089682 (ACET3X_009360)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HTH_44
HHH_7
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_9
SH2
Tex_YqgF
SOAR
POTRA_1
UNC83_N
NBD94
Motif
Other DBs
NCBI-GeneID:
96089682
NCBI-ProteinID:
XP_069303437
UniProt:
A0ABR3UA45
LinkDB
All DBs
Position
9:join(2034539..2034706,2034759..2034920,2034968..2038601,2038662..2038921)
Genome browser
AA seq
1407 aa
AA seq
DB search
MADFFDTIADVGSDEEEDEDFDGEAGEARPKKISEANGIDDSSEEEDDDDEDRLRQEGEG
FIADEDEEDEIAERKRRRRKRKKNREEEEALDDEDLDLIGVEVERPAEEQSRFKRLKRGH
KERVKSRGVDDIFSDDEVNEDYDEPRARLGDEFDDFIEDDKFEDEIEDDRDVTQPGINLI
TKGLQAAGLDEGAEEDYRAAFGDGTDYDWALEMQEAEEDEQAGEGRELQLKDVFEPSQLQ
ERMLTDEDNIIRETDIPERLQLARRSFKEIELTPEDMQARLTEEATWISNMLWPKKGLPR
YFLQPFEKAVRKVLEFINLEDYEVPFIFNHRKDYLIHAPSDNDDYDDIDNPPPMDARPER
LLNQADLWEVFEFDLKFRAFAEKRDALKQNYENLKSVYSDIIDTEIEELTSRAITIEEIQ
ELQDYLHYKYSQEINEVRQEMNGTQKRANNARSFFDKLRVGKANQFVKAIGITAEDFAKR
VDGSSRGAYTIEDPPYKVEELADQMAEAPETGATLLRSTKLLFVEDLKMCSRLRRYLRQS
FYQNAQIDCIRTDKGMRKITEDHPYYEFKYLRGVTFSDLQGRPDLFLKMLKAEAEGLVRV
KISMGNYSTFKARLEEKIISDGVSDISDTWNNFRKELLSVALDKLQDLIANGVKETLRAR
CEDELAASARENYYNKLDQAPYKLKSAPLGSVPNVLCLTNGKGQRGDAVMWAYVENDGRV
LEHGRLVEMRLGNAERGIPEGQDIEKLVDVIQRRRPDVIGVSGFAVETRKLYKDIQEIIS
QRGLTGPAYEDEDTGEEKYESLEVIMVNDEVARLYHTSARAAAEFPKYPALTRYCVALGR
YLQNPLAEYASLGKDIVSIPFIPNQTLIPQEKLLDRLETAMVDMVNLVGIDLPETYDDKY
LSKLIPYVCGLGPRKADRLIKAIQANSDEILSRFDLLGVSESRDLKAAMGPKVFQNCASF
LYIPYDSTEESSDYLDYTRVHPEDYDLARKMVADALNMDEEDVKAETDEGGPSAVVRKMV
REETTDLVNDLALEDYANEIEKNFGQRKRATLETIRAELDNPYEEIRQIFALLSGSEMFT
MLTGETEETLYEGMVVPVTIRRTFPDHIEVKLECGIEGGVSESEFPEGVGSGGQEPRHVY
QTNQIVRARIVYLNRKALTAQLSLRDDLIRQPEKKPYNRAAGEWDEAQEALDKKAAEKEK
EVASGRPNRVVNHPLFFSFNTMQAEEYLGGKETGDLVIRPSSKGFDHLVVTWKVSNNSYQ
HLDVLEMNKPNQFSLGKQLKIGKHTYSDLDELIVNHVEAMARKVTEITRDDKFQPGTRED
TEKWLEVYCEANASRSMYAFCSMPKYPGHFWICFQMSAKGPKGAWPIKVVPNAFELHKNV
YPDMVALKNGFKMLITTAASKNQPPRR
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttcttcgacacaattgccgacgtaggcagcgacgaagaggaggatgaggac
ttcgatggcgaggccggtgaagccagaccgaagaagataagtgaggccaacggcatcgac
gactccagcgaggaggaggacgacgatgatgaagatcgactgcgacaggaaggcgaaggc
ttcatcgcagacgaagacgaagaagacgaaatcgcggagcgcaaacgccggcgcagaaag
aggaagaagaaccgtgaagaggaggaagctctagacgacgaggatctggacctgatcggt
gtcgaggtggaacgtccggcggaagaacagtcgaggttcaagcgtctcaaacgtggtcac
aaagagcgcgtaaagtctcgaggtgtcgatgacatcttctccgatgacgaagtaaacgaa
gactacgacgagccccgcgcgcgcctaggcgacgagtttgatgacttcatcgaggacgac
aagtttgaagacgagatcgaagacgaccgcgacgtcacgcaaccaggcataaacttgatc
acaaagggactgcaagctgctggtctggacgaaggcgctgaggaagactacagggctgcc
ttcggcgatggcacagattacgactgggcgttggagatgcaagaggcggaagaggatgag
caggctggcgaaggccgtgaacttcaactcaaagatgtttttgagccatcgcaactgcag
gagcgcatgcttacggatgaagacaatatcatccgcgagactgacattcccgagcgactg
caactagcccgaaggtctttcaaggagatcgagctcacaccagaggacatgcaagcacgc
ttgaccgaagaggccacctggatcagcaacatgctgtggccgaagaagggtcttccgcgc
tacttcttgcaacccttcgagaaagctgtccgcaaggtccttgagttcatcaatcttgag
gactacgaagtccccttcatcttcaaccatcggaaagactacctcattcatgcaccgagt
gacaatgacgattacgacgatatcgataacccgccgcctatggatgcacgaccagagcgc
ctgcttaaccaagctgatttgtgggaagtctttgagtttgatctcaagttcagggctttt
gctgagaagcgtgacgccctcaagcagaactacgagaacctcaagagcgtgtactctgac
attatcgataccgagatcgaggaactgacgtctagggccatcaccatcgaagagattcag
gaattacaggattatctgcactacaagtattcgcaagagatcaacgaagtccgacaagag
atgaatgggacacagaagcgtgccaacaacgcgcggagcttcttcgacaagttgcgcgtt
ggcaaggcgaatcagttcgtcaaggctattggcatcacagcagaggacttcgcaaagagg
gtcgacgggtcgagccgaggcgcgtatactatcgaggatccgccatacaaggtcgaggag
ctcgccgaccaaatggccgaggctccagagactggcgctacccttctcaggtccaccaaa
cttctgtttgttgaagatctgaagatgtgctcgcgtctgcgtcgatacttgcgccaaagc
ttctaccagaatgctcagatcgactgcattcgtaccgacaagggtatgcgcaagatcacc
gaagatcacccctactacgagttcaaatacctccgcggcgtgacattttcggatctccaa
ggtcgaccggatcttttcttgaagatgttgaaagctgaggcggagggtctcgttcgggtc
aagatctccatgggcaactacagcacgttcaaggcaagacttgaagagaagattatttcc
gatggtgtcagcgacatctccgacacttggaacaatttccggaaagaactgctcagtgtt
gctctagacaagctacaggatctcatcgcgaacggtgtcaaggaaactctgcgcgctcgc
tgcgaagatgagcttgccgcatcagccagagagaactactacaacaagcttgaccaggca
ccttacaagctgaagagcgcacctcttggatcggtacccaacgtcctctgtctgaccaac
ggcaagggtcaacgtggagatgcagtcatgtgggcttacgtcgagaacgacggacgggtt
cttgagcacggccgcttagtcgagatgcgacttgggaatgcagagcgtggtattcctgaa
ggccaagacattgagaagctggtagatgtaatacagcgtcgccgcccagacgtcatcggt
gtcagtggcttcgctgtggagacacgtaagctgtacaaggacatacaggagattatcagt
cagcgaggtctgacaggtccggcctacgaggatgaagacactggtgaagagaagtacgag
tcgttggaagtcattatggtcaacgatgaggtcgctcgtctttaccacacaagtgcccgg
gctgccgctgagttccccaaatatcccgcactaacgaggtattgcgttgctcttggccga
tatctgcagaacccattggcggaatacgcatcgctcggcaaagacatcgtttcgataccc
ttcatcccgaaccaaaccttgattccacaggagaaactcctcgaccgactggaaaccgcc
atggtagacatggtcaatcttgtgggtatcgacttaccggagacctacgacgacaagtac
ctatcgaagttgataccttacgtgtgcggtctgggacctcgcaaagccgatcggttgatc
aaagccatccaggcgaacagtgacgagatcctgtcgcggttcgacctacttggcgtatct
gagtcccgcgaccttaaggcggctatgggccccaaggtgttccaaaattgcgccagtttc
ttgtatattccttatgactcaacagaggagtcgtccgactacctggactacactcgtgta
catccagaagattacgatcttgccaggaaaatggttgccgatgcccttaacatggacgag
gaagatgtcaaggctgagaccgacgagggtggccccagtgctgtcgtcagaaagatggtc
cgggaggagactaccgatctagtcaacgacctagcacttgaagactacgcaaatgaaatc
gagaagaatttcggacagcgtaagcgcgcgacgctcgagacgattcgtgctgagctcgac
aatccttacgaggaaatccggcagatcttcgctctcttgtccggcagcgagatgttcaca
atgttgactggtgagacggaggagacactctacgagggtatggttgtacctgttactatc
aggcgcaccttcccagaccacattgaagtcaaactcgaatgtggtatcgaaggtggtgtc
tccgagtcggagttcccagagggtgttggcagtggaggacaagagcctcgccatgtctac
cagaccaaccagattgtacgcgcgcgtatcgtctacctcaaccgcaaagctctcaccgcc
caattgtcgcttcgagatgatctcatccgacagccagagaagaagccctacaatcgtgca
gctggcgagtgggatgaagcacaagaagctctcgacaagaaggctgccgagaaggagaag
gaagttgcgtctggccgaccgaaccgtgtcgtcaatcacccacttttcttttccttcaac
accatgcaagctgaggagtacctgggcggaaaggagactggcgacctggtcattcgtcca
tcatccaagggtttcgatcatcttgtcgtcacatggaaagtatccaacaactcgtaccaa
catctcgacgttctcgaaatgaacaagcccaaccaattctcgctgggaaagcagctcaag
atcggaaagcatacatactccgatctcgacgagttgattgtcaaccacgtcgaggcaatg
gcacgcaaggtcacagaaatcacacgagacgacaaattccaacctggtacacgagaagat
actgaaaaatggctagaggtctactgtgaagccaacgcttcacgctccatgtacgccttc
tgcagcatgcccaagtaccctggtcacttctggatctgcttccagatgagcgccaaggga
cccaagggtgcatggcccatcaaggttgtgcccaacgcgtttgagctacacaagaacgtc
tatccggacatggtagcactcaagaatggcttcaagatgctaatcaccactgcggctagc
aagaatcagcctcctaggcgttga
DBGET
integrated database retrieval system
