Alternaria dauci: 96089699
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Entry
96089699 CDS
T10615
Symbol
ACET3X_009377
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
adac Alternaria dauci
Pathway
adac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
96089699 (ACET3X_009377)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96089699 (ACET3X_009377)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
96089699 (ACET3X_009377)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
96089699 (ACET3X_009377)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WKF
HR1_TOCA
DUF948
Chal_sti_synt_C
CorA
EAD9
Motif
Other DBs
NCBI-GeneID:
96089699
NCBI-ProteinID:
XP_069303454
LinkDB
All DBs
Position
9:complement(join(2083788..2083848,2083955..2085537,2085587..2085841))
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AA seq
632 aa
AA seq
DB search
MAARKLQQEIDKCFKKVAEGVATFENIYEKIMQTGNPSQKEKLEDQLKKEIKKLQRSRDQ
IKTWAAMSEIKDKKPLLDHRKLIETQMERFKAVEKEMKTKAYSKEGLQLASKIDPKDKEK
MEMVEFLQQMNEELERQIETIEAEIETLHANVKKTKKGDNSKAERIAELEESVERNKWHQ
SKLDLLHRALENGNVETEQVKGIEDGIKYYVESNQDPDFADDDTMYDDFNLQEEEAIFGL
GEGLDQVSSHESQSVADDTNESDIRPPPPKPKATEAVQQAARRPSTQMKSPLPALATLHT
PLPGASNTTANAMKPAPIPTRTSGEPLKYASAAAAAAASDKNGVGIAPLPPPPGAAVAQS
GLAPGGARASATSSPAITHSQPAPRAQPAESAQASPAPAASIPATPAVEKETLSRAASSE
DASKSSRRTPAPEPVEEQEESSAATPPLTNGESHAEDDEEESVYHLPSSLQDLLDSFEAT
KNDISASATKPPDERMLAASMATAPDSADTEAPRHYRPQNPYPFTPAHYPQEPLPIFDDP
RLYSRIETDALFYAFYYRQGTYQQYLAAKALKSQSWRFHKQYQTWFQRHEEPKAITEDYE
QGTYRFFDYESTWMNRRKADFRFAYKFLEDEL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacggaaactccagcaggagattgacaaatgcttcaagaaagtcgccgaaggc
gttgcgacgttcgaaaacatatacgagaagattatgcaaacgggcaacccctcgcagaag
gagaagctcgaggaccagctgaagaaggagatcaagaagctacagcggtcgcgggaccag
atcaagacatgggccgccatgtccgagatcaaggacaagaagccgctgctcgaccaccgg
aagctcatcgaaacacaaatggagcgcttcaaggccgtcgaaaaggagatgaagacgaag
gcatactccaaggaggggctgcaattggcgtccaagatcgaccccaaggacaaggagaag
atggagatggtcgagttcctgcagcaaatgaacgaggagctggagcggcaaatagagaca
atcgaggctgaaatcgagacgctgcatgccaatgtcaagaagacgaagaagggcgacaac
tccaaggcggagcggatagcggagctggaagagtcggtcgagcgaaataagtggcatcag
tccaagctggacctgctgcatcgagcgctcgagaacggcaatgtggagacggagcaggtc
aaaggaatcgaggacggcatcaaatactacgtcgaaagcaatcaggaccccgattttgca
gacgacgacacaatgtacgacgacttcaacctgcaagaagaggaggccatcttcggcttg
ggcgaaggcttggaccaggtctcatcacacgaatcgcagtcggtcgcagatgataccaac
gagtcggacatacgaccgccaccaccaaagccaaaagcgacagaggctgtacaacaagca
gcaagacggccctcgacacagatgaagtcgccactgccagcactagcaacgctgcatacg
cctttgcccggtgcctcaaataccacggccaatgccatgaagcccgcgcccatacctaca
cggacgtcgggcgagcccttgaagtacgcctcggccgccgccgctgcagctgcgagtgac
aaaaatggagtgggcattgctcctctgccaccaccaccgggagctgctgtggcgcagtcg
ggccttgctccgggcggcgcacgcgcaagtgccacgagttctccagccattacacattcc
caaccagccccacgcgcacagccagccgaatccgcacaagcatcgccagctcctgcggca
agtatacccgctacgcccgctgtcgagaaggagacgctttcgcgtgctgcttcgtcggag
gatgcttcaaagtccagcaggagaacgccagctcctgaacctgtggaagaacaagaagag
tcctcggctgctactccgccattaacaaacggcgaatcacatgctgaagacgacgaggaa
gagtcagtataccaccttccttcaagcttacaggatctcctggattccttcgaagcgacc
aagaatgacatatccgcctctgcaacaaagcccccagatgagcgcatgctagcagcatcc
atggctaccgcgccggactctgccgacactgaggcgccccgccactaccgccctcagaat
ccctatccgtttacgcccgcgcactacccgcaagagccgttaccaatcttcgatgatcct
cgcctctactcccgtatcgagactgacgctctcttttatgccttctactaccgccaaggt
acatatcaacagtacctggcggcgaaagcgctcaagtcgcagagctggagattccacaag
cagtatcaaacatggttccaacgacacgaagaaccaaaagcgataacagaagactacgag
caggggacgtacagattcttcgactacgaatccacatggatgaaccgaaggaaagcagat
ttccgatttgcctacaagttcttggaagatgaactatga
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