KEGG   Alternaria dauci: 96089837
Entry
96089837          CDS       T10615                                 
Symbol
ACET3X_009515
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
adac  Alternaria dauci
Pathway
adac03013  Nucleocytoplasmic transport
adac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    96089837 (ACET3X_009515)
  09122 Translation
   03013 Nucleocytoplasmic transport
    96089837 (ACET3X_009515)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adac03019]
    96089837 (ACET3X_009515)
   03041 Spliceosome [BR:adac03041]
    96089837 (ACET3X_009515)
Messenger RNA biogenesis [BR:adac03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     96089837 (ACET3X_009515)
Spliceosome [BR:adac03041]
 Complex C
  Other components
   EJC/TREX
    96089837 (ACET3X_009515)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    96089837 (ACET3X_009515)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 WD40_CDC20-Fz Beta-prop_WDR5 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_1st WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_Aladin DSE1_N WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR19_1st CFAP251_N Beta-prop_WDR75_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Tricorn_2nd Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP Beta-prop_NUP159_NUP214 Cytochrom_D1 choice_anch_I
Other DBs
NCBI-GeneID: 96089837
NCBI-ProteinID: XP_069302348
UniProt: A0ABR3U807
LinkDB
Position
10:join(131423..131863,131914..132456)
AA seq 327 aa
MAPPIRARSIKSDAFHEHFRKLKTSVYQDSPRPNAVSTSHYIRSLSWNASGTFIATGAAD
RTLRIWNPEKTNAKNSTELRTPNTTAALERVAFHPINENELASATSDGMVRFWDIRSKAS
VGEVKVGECPFTLAWTPDGSGLVAGRKDNLLVTIDRSALSVVSEHQQVYQTNQCVFDWSG
NHLYSTVGDGSVRLLQYPSFENTLTLNAHTSACYAVSLSPSGEYLAAGGGDALISLWDTQ
EWICTRTLELTGGIIKSVDFSFDGSYVTAGSDDKEEKKIRIAHVHTGDIVHTIDVPTPAL
HVAWHPCRYILAYSAENLGLKIVGGIS
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcgcccccaatacgcgcgcgctccatcaaatccgacgccttccacgaacacttccgc
aagctcaaaacgtccgtgtaccaagacagtccgcgccccaacgccgtctcgacatcgcac
tacatccgctcgctgtcctggaacgcgtctggcacgtttattgccacgggcgccgcggac
aggacactgcgcatctggaacccggaaaagacgaatgcgaaaaactcgacggagctgcgc
acgcccaatacgacggccgcgctcgaacgcgtcgcgttccacccaatcaatgagaatgag
ctggcgagcgcgacgtcggatggcatggtcaggttctgggacatacggtctaaggctagt
gtgggcgaagtgaaagtcggcgagtgtccgtttacgctggcgtggacaccagatggcagc
ggattggttgcagggagaaaggataacctcctcgtcaccattgatcgatcggctctcagc
gtcgtctcggagcaccagcaagtctaccaaacaaaccaatgcgtcttcgactggtcgggc
aaccacctctactcgaccgtcggcgacggcagcgtgcgcctgctgcaatacccctcgttt
gaaaacacgctcacgctcaacgcccacacctctgcatgctacgccgtctcactatcgccc
agcggcgagtatctggctgccggcggcggcgacgcgctcatctcgctctgggacacacag
gaatggatatgcacacgcacgctggagctgacgggcggcatcatcaagtcggtcgatttc
tcgttcgacggcagctatgtgacggctggctcggacgacaaggaggagaaaaagattcgc
attgcgcatgtccatacgggggacattgttcacacgattgatgtgccgacgccggcattg
catgtcgcgtggcacccatgccggtacatactagcgtactcggccgagaatctggggttg
aagatcgtcgggggcatcagctag

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