Aquihabitans daechungensis: ACE2AJ_20395
Help
Entry
ACE2AJ_20395 CDS
T11326
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
adae Aquihabitans daechungensis
Pathway
adae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
adae00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACE2AJ_20395 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adae03021
]
ACE2AJ_20395 (rpoD)
Transcription machinery [BR:
adae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACE2AJ_20395 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DNA_Packaging_2
Sigma70_r1_1
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
XQO43720
LinkDB
All DBs
Position
4076035..4077342
Genome browser
AA seq
435 aa
AA seq
DB search
MAAAPTADSSAWDLLIQRAKDDGSLTVTQAEVLEVVEIDIERLDQEIEAIRKLLDEHGIT
LDESPDADAIAAELEAQAERDAVVHVNEVLADPLGGIDLAADEDGSRRKLRLVKAPRVGA
DRSGSGSADPVRVYLKEIGRVPLLTGMEEVTLAKRIEAGGQAAVRLAELEAAGRIEELDV
AARRRLERTSRDGERAKSDLIQANLRLVVSIAKRYVGRGMHLLDLIQEGNLGLMRAVEKF
DYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVESINKVHRIQRQMMQELERDPT
VEELAAKVDMTPDRVREIMRISQDPLSLDSPVGETDDSQLSDFIEDTQADAPAEMAARNM
LGKAVVEALSELSDREKEVVRLRFGLDDGQARTLEEVGKEFGVTRERIRQIEAKTLAKLR
NPNRSQKLRDYLDGD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctcccaccgccgactcctccgcctgggacctgctgatccagcgggccaag
gacgacgggtccctcacggtcacgcaggccgaggtgctcgaggtcgtcgagatcgacatc
gagcggctcgatcaggagatcgaggcgatccgcaagctcctcgacgagcacggcatcacg
ctcgatgaatcgcccgacgcggatgccatcgccgcagagctcgaagcacaggccgagcgc
gacgcggtcgtgcacgtgaacgaggtgctggccgatccgctcggcggcatcgacctcgcc
gccgacgaggacggctcccgccggaagctccgactggtgaaggcgccgcgcgtcggggcc
gaccgttcgggctcgggcagcgccgatcccgtccgcgtgtacctcaaggagatcggccgg
gtcccgctgctgacgggcatggaggaggtcaccctcgccaagcgcatcgaagccggcggc
caagcggctgtccgcctcgcggagctcgaagccgccggtcgcatcgaggaactcgacgtc
gccgcccgtcgccggctcgaacgcacctcccgcgacggcgaacgggccaagagcgacctc
atccaggccaacctccgcctcgtcgtctccatcgccaagcggtacgtaggccgggggatg
cacctcctggacctcatccaggaggggaacctcggcctgatgcgtgcggtcgagaagttc
gactacacgaagggcttcaagttctccacgtacgccacgtggtggatccgccaggccatc
acccgggccatcgccgaccaggcccgcaccatccgcatcccggtgcacatggtggagtcg
atcaacaaggtccaccggatccagcgccagatgatgcaggaactggagcgggaccccacg
gtcgaggaactggcggccaaggtcgacatgaccccggaccgggtgcgggagatcatgcgg
atctcccaggacccgctgtcgctcgattcaccggtgggcgagaccgacgactcccagctc
tccgacttcatcgaggacacccaggccgacgccccggccgagatggccgcccgcaacatg
ctcgggaaggcggtcgtggaggcgctgtcggagctcagcgaccgagagaaggaggtcgtg
cggctgcgcttcggcctcgacgacggccaggcccgcaccctcgaggaggtgggcaaggag
ttcggcgtgacgcgcgagcggatccgccagatcgaggccaagaccctcgccaagctccgc
aacccgaaccgcagccagaagctgcgcgactacctcgacggcgactga
DBGET
integrated database retrieval system
