Anopheles darlingi (American malaria mosquito): 125948682
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Entry
125948682 CDS
T11379
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
adar Anopheles darlingi (American malaria mosquito)
Pathway
adar03020
RNA polymerase
adar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125948682
09124 Replication and repair
03420 Nucleotide excision repair
125948682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adar03021
]
125948682
03400 DNA repair and recombination proteins [BR:
adar03400
]
125948682
Enzymes [BR:
adar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125948682
Transcription machinery [BR:
adar03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125948682
DNA repair and recombination proteins [BR:
adar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125948682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
125948682
NCBI-ProteinID:
XP_049530932
LinkDB
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Position
2:complement(56793176..56800064)
Genome browser
AA seq
1880 aa
AA seq
DB search
MSSDSKAPLRTVKRVQFGILSPDEIRRMSVTEGGIQFAETMEGGRPKLCGLMDPRQGVIE
RTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPTNPKI
KEIVMKSKGQPRKRLAYVYDLCKGKKICEGGEDMDLTKDGGVADPSKKQGHGGCGHYQPS
IRRTGLDLMAEWKEVNDENQEKKMQVSAERVYEILKHITDEECYVLGMDPKFARPDWMII
TVLPVPPLAVRPAVVMFGATKNQDDLTHKLSDIIKANNELKKNEQTGAAAHVIAENIKML
QFHVATLVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSVAQNMTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERIDLR
FHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEIENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFIEKEQMMNLLMFLPTWDGKMPQPCILKPKPLWTGKQIFTLIIPGNVNMIRTHSTHP
DEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHIVFLELGHEIAGRFYG
NIQTVVNNWLLLEGHSIGIGDTIADPQTYAEIQRAIRKAKEDVIGVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGEAVEFQNLPTIK
LSNKVFEKRYRFDPTNERTLRRIFNEDVIKELTESASVIQEIEAEYEQLMRDREALRQIF
PNGDSKVVLPCNLQRMIWNVQKIFHINKRSPTDLSPLKVIQGVRDLLQRCVIVAGTDRLS
KQANENATLLFQCLVRSTLCTKYVAEEFRLNNEAFEWLIGEIETRFQQAQVNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKRPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVIAEDQEFVNVYYEMPDFDPTRISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNEDNKFQE
NEEENVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDAKKRIVITPEGEFKP
IGEWLLETDGTSMMKVLSERDVDPVRTYSNDICEIFSVLGIEAVRKSVEKEMNNVLQFYG
LYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLNDAAAHAEVDP
MRGVSENIILGQLPRMGTGCFDLLLDAEKCKLGMEIPHTSIMGATGMFFGSAATPSMTPW
QQSATPGYGGWSPSGPASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPY
PPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPCYSPPSPQYSPGSSNYSPSSPNIHP
ATQKYSPTSPSYSPMSPMHPTSASNYASPAYSPTSPSYSPTSPSYSPSSPVFSPTSPSYS
PSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSP
KYSPTSPSYSPTSPSYIGSPHYTPASPQYAQTSPNYSPTSPSYSPSSPQHSPGSSSGSNH
YSLGSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPS
SPASPTYSPTSPSYDDSNED
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgattcgaaggcaccgttgcggacggtgaagcgggtgcagttcggaattctc
tcgccggacgaaatccgccgcatgtccgttaccgagggtggtatccagtttgcggagacg
atggagggtggccgaccgaagctgtgcggattgatggatccgcggcagggtgtcatcgag
cgtacctcccgctgtcagacgtgcgctggcaacatgaccgaatgtccgggccactttgga
catatcgatctagcgaaaccggtatttcacatcgggttcatcacgaaaacgatcaaaatc
ctgcgctgcgtttgcttctactgctccaagatgctggtctcaccgaccaatcccaagatc
aaggagatcgtcatgaaatccaaggggcagccgcgcaaacgactggcgtacgtgtacgat
ctgtgcaagggcaaaaagatctgcgaaggtggcgaagacatggacctcaccaaggacggc
ggtgtggcggatccgagcaagaaacagggccacggtggttgcggtcactaccagccctcg
atccggcgcaccgggttagatctgatggccgaatggaaggaggtgaacgacgagaaccag
gaaaagaagatgcaggtttcggctgagcgcgtatacgagattctcaagcacatcaccgac
gaagagtgctacgtgctcggcatggacccgaagtttgcacgtcccgattggatgatcatt
acggtactgccagtaccaccgcttgccgtacgcccggccgtcgtcatgttcggtgcgacg
aagaatcaggacgatttgacgcacaaactttccgacatcatcaaggccaacaatgagctg
aagaagaacgaacagaccggtgcagcggcacacgtgattgcggagaacatcaagatgctc
cagtttcacgtagcaacgctcgttgacaacgacatgcccggtatgccgaaggcgatgcag
aaaagcggcaaaccactgaaagccatcaaagctcggctgaagggtaaggaaggtcgtatc
cgtggtaatctgatgggtaagcgtgtcgacttttcggcccgtaccgtcatcacaccggat
ccgaatctgcgaatcgaccaagtaggcgtaccgcgttccgtcgcacagaacatgacgttt
cccgagctggtcacgccgttcaacatcgatcgcatgcaggagctggttcggcgcggtaac
tcgcagtatcccggtgccaagtacattgtgagggacaatggtgagcggatcgatttgcgc
ttccacccgaaatcctccgatctgcatctgcagtgtggctacaaggtcgagcggcatttg
cgggacgacgatctggtgatcttcaatcgtcagccgaccctgcacaagatgagtatgatg
gggcatcgggtgaaggtgctgccctggtccacgttccggatgaatctcagctgtacctca
ccgtacaatgccgatttcgacggtgacgagatgaatctgcacgtgccacagtcgatggag
acgcgagcggagatcgagaacattcacatcacgccacgccagatcattacgccacaggcg
aacaaaccggtcatgggtatcgtgcaggacacgctgacggcggtccggaagatgacgaag
cgcgatgtgtttatcgagaaggagcagatgatgaacctgctcatgttcctgccgacctgg
gacggcaagatgccgcaaccgtgcatcctaaagccgaaacccctttggaccggtaagcag
atctttacgctcatcattcccggtaacgtaaacatgatccgaacacactcgacgcatccg
gacgaggaggatgacggaccgtacaaatggatttcacccggcgacacaaaggtcatggtc
gaacacggagagctgatcatgggtattctatgcaagaaaacgctcggtacctcggccggt
tcgctgctgcatatcgtgtttctcgagctgggccacgagattgccggtcggttctatggt
aacatccagacggtcgtcaacaactggctgctgctggagggtcacagtatcggtatcggt
gacacgattgccgatcctcagacgtacgccgaaatccagcgtgccatccgaaaggcaaag
gaggacgtgataggcgtgatccagaaggcgcacaacatggaactggaaccgacacccggt
aacacgcttcgacagacattcgagaaccaggtgaatcgtatcctgaacgatgcccgtgac
aagacgggcggttcggccaagaaatccctaacggagtacaacaatctgaaggcgatggtg
gtttccggttcaaagggatccaacattaacatctcccaggttattgcttgcgtggggcag
cagaacgtcgagggcaagcgcattccgttcgggttccgcaagcgcaccctgccacatttc
atcaaggatgattacggtccggagtcgcgtggtttcgtggaaaactcctacctggccgga
ctgacaccgaccgagttctactttcacgccatgggtggtcgcgagggtttgatcgatacg
gccgtcaaaacggcagaaaccggttacatccagcgtcgtttgatcaaggctatggagtcg
gtaatggttaactacgatggtacggtgcgtaactcggtcggtcaactgatccagctgcgt
tacggcgaggacggtctgtgcggtgaggcagtcgagtttcagaatcttccgacgatcaag
ctatcgaacaaggtgttcgagaagcggtaccgcttcgatccgaccaacgagcgtacactg
cgccgtatcttcaacgaggacgtgatcaaggaactgacggaatcggcctcggtaatccag
gagattgaggccgagtatgaacagctgatgcgtgatcgggaggcgttacgtcagattttc
cccaacggtgactcgaaggtggtcctgccctgtaatctgcagcgtatgatctggaacgtg
cagaagatcttccacatcaacaaacgctcaccgacggacctgtcaccgctgaaggtcatc
cagggagtgcgcgatctcctgcaacggtgcgtgatcgtggccggtacggatcggctgtcg
aagcaggccaacgaaaacgcaactttgctgttccagtgcttggtccggtcgacgctttgc
accaagtacgtggccgaagagttccggctgaacaacgaagcgttcgagtggttgatcggt
gaaatcgagacacgattccagcaggcacaggtaaatccgggcgagatggtcggtgctctg
gccgctcagtcactcggtgaacccgctacgcagatgacgctcaacacgttccactttgcc
ggtgtgtcgtcgaagaacgtaacgctcggtgtgccacggttgaaggaaatcattaacatc
tccaagcgaccgaaggctccgtccctgacggtgttccttaccggtggtgcagcccgtgat
gcggagaaggcgaagaatgtgctttgccggctcgagcacacgacactgcgcaaggtgacg
gctaatacggcaatctactacgatcccgatccacagcggacggtgatcgcggaggatcag
gagtttgtgaacgtgtactacgagatgcccgactttgatccgacgcgcatctccccctgg
ctgttgcgtatcgagcttgatcggaagcgcatgacagacaagaagctaacgatggaacag
atagcggagaagattaatgccggtttcggtgacgatctgaactgtatcttcaacgatgat
aacgctgacaagctggtgctgcgcattcgtatcatgaacgaggataacaagttccaggag
aacgaggaggagaacgtggacaagatggaggacgatatgttcctgcgttgcatcgaggcg
aacatgctgtcggacatgacgctccagggtatcgaggcaatcggtaaagtgtacatgcat
ctgccgcagacggacgcgaagaagcgtattgtcatcacacccgagggcgagtttaagccg
atcggtgagtggctactggaaacggacggtacctcgatgatgaaggtgctgagcgaacgg
gatgtggatccggtgcgtacgtacagtaacgatatctgcgagatcttctccgtgctcggt
atcgaggcggtgcgaaagtcggtggagaaggaaatgaacaatgtgctgcagttctacggt
ctgtacgtgaactatcgtcatcttgcgctgctgtgtgacgtaatgacggccaagggtcac
ctgatggcgatcactcgacacggtatcaataggcaggatacgggcgcgctgatgcgttgt
tcgttcgaggaaacggtggacgtgctgaatgatgcggccgcccatgccgaggttgatccg
atgaggggcgtctcagagaacatcattctcggacagctgccacggatgggcaccggttgc
ttcgatctgttgctcgacgcggaaaagtgcaaacttggcatggagatcccgcatacttcg
attatgggtgcaacgggaatgttcttcggatcggccgctacaccgagcatgacaccatgg
caacaatcggcaacgcccggttacggtggatggtctccgtcgggaccggccagtggtatg
actccgggagggcccagcttttccccgtcggcccaatcggatgcctcgggcatgtcgcca
tcgtcctggtcaccgatacgtggttcaccgagttcacccggtccatcgatgtcaccctat
cctccgtcgtcaccatcgatgtcaccgtcctactcgccgagcagcccgaactatgctccc
aactctcccggaggtgcctcaccttcttactcaccgaccagcccttgttactcaccaccg
agtccacaatattcgcccggaagctccaactattcaccaagcagcccaaacatccatccg
gccacccagaagtactcgcccacctcaccaagctactcgcccatgtcaccgatgcatccg
acgagtgcctccaactacgccagtccagcctactctccgacgagtccctcgtactcgccg
acttctccgagctactctccttcgtcacccgtcttctcacctaccagcccctcctactca
ccctccagtccatcgtattcacccacctcaccgagctactccccgacaagcccctcgtac
tcgcctacgtcgcccaactttacgcccgtcacaccgtcctactcgccgagcagtccgaac
tactcgcccacctcaccacactattcacctgcctcaccaagctactcgccctcgtcaccg
aagtactcgcctaccagtccctcgtactcgccgacatctccgtcgtacattggcagtccg
cactacacaccggccagccctcagtacgcgcagacgagcccgaactattcaccgacgagt
ccatcgtattcgccgagttcaccgcagcattcgccgggtagtagtagcggcagcaaccac
tacagtctcggttcgtcctcgtactcgcaaacaccggccccgtactcccccaacatgtcc
tcgtactcgccgagcagccccaagtactcgcctaccagccccgtctatacgtctagctcg
ccgacctactcaccctcgtcgccggcctactcgcctacaccgcaaggctacagtccttcc
agcccggccagtccgacctactcccccacgagtccttcatatgacgatagcaatgaggat
taa
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integrated database retrieval system
