Anopheles darlingi (American malaria mosquito): 125949088
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Entry
125949088 CDS
T11379
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
adar Anopheles darlingi (American malaria mosquito)
Brite
KEGG Orthology (KO) [BR:
adar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adar03016
]
125949088
Enzymes [BR:
adar01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
125949088
Transfer RNA biogenesis [BR:
adar03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
125949088
Prokaryotic type
tRNA splicing ligases
125949088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
125949088
NCBI-ProteinID:
XP_049531742
LinkDB
All DBs
Position
2:90864724..90866462
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AA seq
506 aa
AA seq
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MVVREYNEEMKYIERLSPNSFLIKKGFQPNMNVDGVFYANSRLEKLMFEELRNACRPGMS
GGFLPGVKQIANVAALPGIVGRSVGLPDIHSGYGFAIGNMAAFDMNDPTSIVSPGGVGFD
INCGVRLLRTNLFEKDVTPVKEQLAQSLFDHIPVGVGSKGIIPMNAHDLEEALEMGMDWS
LREGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVEEIYD
KYAASKMGIEELGQICVMIHSGSRGFGHQVATDALVEMEKAMKRDKIETNDRQLACARIN
SPEGQNYLKAMSAAANFAWVNRSSMTFLTRQAFAKQFNTTPDDLDMHVIYDVSHNVAKME
EHMVDGRPKQLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGSMGTCSFVLTGTEKGM
VETFGSTCHGAGRSLSRAKSRRQLDYKDVLRDLEEKGISIRVASPKLVQEEAPDSYKDVR
DVVQTCHDVGISNKAIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgcgagaatacaacgaggagatgaaatacatcgagcgtctatcgccgaacagt
ttcctcatcaaaaaggggtttcagccgaacatgaacgttgatggcgtattttacgccaac
agccggcttgagaagctgatgtttgaggagctgcgcaacgcatgccgacccggaatgagc
ggcgggtttctgcccggagtgaaacagatcgcaaacgttgcggctctgccgggaatcgtt
ggccgctcggtgggcctgcctgatattcactccggttacgggtttgcgatcggaaatatg
gcagcgtttgatatgaacgatccaacgtccatcgtatcacccggtggcgtcggattcgac
atcaactgcggagtgcgtttgctgcgcacgaatctgttcgagaaggacgtcacgccggta
aaggaacagcttgcgcaaagcctgttcgatcacattccagtaggcgttggctcgaaggga
atcattcccatgaatgcccacgatctggaggaagccctcgagatgggcatggattggtca
ttgcgcgagggctacgtatgggcggaagacaaggaacactgcgaagagtatggccggatg
ctgaacgcagatccaagcaaggttagcctaagggcgaagaaacggggtctaccacagctc
ggaacgctcggagccggtaatcattacgcggagattcaggtggtggaagagatctacgac
aagtatgcggccagcaagatgggcatcgaagagttgggacaaatttgcgtgatgattcac
tccggtagccgtggattcggccatcaggtggcaaccgatgcactggtcgagatggagaag
gcgatgaaaagggacaaaatcgaaacgaacgatcgtcagctggcatgtgcacgcatcaac
agcccggaagggcagaactacctcaaggcgatgtcggcggcggccaactttgcctgggtc
aatcgtagctccatgacgttccttacgaggcaagcgtttgcgaagcaattcaacaccaca
cccgatgatctggacatgcacgtaatctacgacgtgtcccataatgtggccaaaatggag
gaacacatggtggacggtcgaccgaagcagttgctcgttcaccggaagggatcgacccgt
gctttcccgccacatcatccgctgattccggtggactatcagcttaccggacaaccggta
ctggttggtggttcgatgggtacgtgcagcttcgttctgacgggcacggagaagggtatg
gtagaaacctttggatctacgtgccacggagcgggtcgtagtttatcgcgcgccaaatca
cgccgtcagctggactacaaagatgtattgcgcgatctggaagagaagggcatctcgatt
cgtgttgcctcaccaaagctggtgcaagaggaggcacccgactcgtacaaggatgtgcgc
gatgtggtgcagacgtgtcacgatgtgggcatcagcaataaagcaatcaagctgcgaccc
atcgccgtaattaagggataa
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