Anopheles darlingi (American malaria mosquito): 125951244
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Entry
125951244 CDS
T11379
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
adar Anopheles darlingi (American malaria mosquito)
Pathway
adar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125951244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adar03400
]
125951244
DNA repair and recombination proteins [BR:
adar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125951244
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
HalX
Motif
Other DBs
NCBI-GeneID:
125951244
NCBI-ProteinID:
XP_049535891
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Position
2:complement(16526620..16530633)
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AA seq
1181 aa
AA seq
DB search
MSKNKSKLPASPNTLLSYFARSPAGNKSAKPSTPTSALAGAPRSTKLAESEPAGSTPKSK
KFTIKNEKESAKKETNKKDEHTNGEANEEEEEIGIRKKRRRVITFGDSDSDSEEPQTKTE
PAHNNNNNNNNTEGKDKKPFGLSSFEWPIKEDNAESAKKKAEEETAGGPATKKVKLEAGK
RIEEEDGPEELATALDEPIVWAHQKLEFLKPNKIKDIQGNRPGSEKYDGRTLFVPESFLN
TLTPAMRQWWEIKSQHYDCVLFFKVGKFYELYHMDAEVGVSELGFSFMKGEFAHSGFPET
AYDRMSTSLIEKGYKVARIEQTETPEMMQERCKVQRTNSKYDKVVRREVCQVTVKGTEVF
GQQVRITTNHAPRYMMTIVESSPAGLGAGCRYGVCFIDTSIGLFHLGEFDDDNQQSRLLT
LLSHYSPVIILTERSATAYSEGTQRIFKTLLAHVPREALTNESQLWSGEKTLRYLAEKFY
GGSSGGESSKWPPVLRSLVDDSDSLGLTPKQSSLLALKALGGCIWYLQRSLLDQQVIPLA
TFEQYIPLDAKPDKTAGETSARIGAANANRYMVLDSITLNNLKIIGGEGSLADRMDHCCT
KFGKRLFHHWVCVPSCELEVIVQRQQAVTELIDHVTLLQDVRALLGQLPDMERLVTQIHA
FGNATCSGRNHPAGRAILYEELTYGKKKLSDFIATLNGFRALIGLPDMFDNAKSELLVRI
TQSASVGGAFPIETMRKQLAFFDKAFDHEKALKSGVIAPERGVDSEYDTVEREIETLKTE
LEEYLAEQSKFFGCTVVYFGNDKKRYQLEVPEARAKKATSEYSLESQRAGKNGVKRFHTE
ETRQFLRQMTQLEDKRKMVLKDLARRIFEKFSLEYSTWKGCVEMVATLDVLTSLAEYARS
EGVCCVPELLPNGSNGKPLIEIEEGIHPCIASELMESFIPNGISIGGEGKASLVLLTGPN
MGGKSTLMRQVGLLAVMAQIGSRIPAERCRMTLVDRIFTRLGASDDIMAGHSTFLVELNE
TSAILKHATSDSLVLLDELGRGTATYDGTAVAGAVVHFLADRQCRTLFSTHYHNLVDSFH
ADPRIALGHMACMVENEEGDDPTQETVTFLYKYADGPCPKSYGFNAAKLAGMPMAIIKRA
YELSKKVERDALKRKIMMKLVKGAPEPEIRDLVAKLQSCRF
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaacaaaagcaaattacccgcttcgccgaacacacttctaagctactttgca
cgttcgccggccggcaataaatccgctaaaccatcaacaccaacgagtgctttggcgggg
gcaccgcgatcgacgaagctcgccgagtccgagccggccggcagcaccccgaaaagcaaa
aaattcactattaaaaacgaaaaggaatctgccaagaaagagacgaacaaaaaggatgag
cacacgaatggagaggcgaacgaggaagaggaggaaataggaattcgtaaaaaacgccgc
cgcgtgatcacgtttggcgattcggattccgattccgaagagccccagactaaaaccgag
ccagctcacaacaacaacaacaacaacaacaacacggaaggcaaggacaagaaacctttt
gggttgagctcgttcgagtggcctattaaggaggataatgcggaatcggcaaagaagaag
gccgaggaagaaacggccggaggtccggccacgaagaaggtcaaacttgaggctggcaag
cggattgaagaggaggacggaccggaagagctggccacggcactcgacgagccgatcgtg
tgggctcaccagaagttggaatttctcaaacccaacaaaatcaaagacatccagggcaac
cggccgggcagtgagaagtacgatggcagaacgttgttcgtgccggaatccttcctgaat
acgctcacaccggccatgcgtcagtggtgggaaatcaagagccagcactacgactgcgtg
ctgttcttcaaggtgggcaagttctacgagctgtaccacatggacgccgaggtcggcgtg
tccgagctggggttctcgttcatgaagggcgaattcgctcactcgggatttcccgagacg
gcctacgaccgtatgtcgacttcgctgatagagaagggctacaaagtggcccggattgaa
caaacggaaacaccggaaatgatgcaggagcgatgcaaggtgcagcgcaccaacagcaag
tacgataaggtggttcgccgtgaggtgtgccaggtgacggtgaagggaacggaagtgttt
gggcagcaggtgcgcatcacaacaaaccacgcgccccgctacatgatgacgatcgtggaa
tcaagccctgctggtctgggcgctggttgccggtacggcgtatgctttatcgacacctcg
atcggtctcttccatctgggcgaattcgatgacgataaccaacaatcgcgcctgctgaca
ctcttatctcattattcaccggttatcatcctaactgaacgttcggctactgcttattca
gaaggaactcaacggatcttcaaaactctgctggctcacgtgccacgcgaagcgctcacc
aacgaaagccagctatggtcgggtgagaaaacgttgcgttatctggccgagaagttctac
ggcggatcatcgggtggagaatcgagcaaatggccaccggtgctacgctcactggtagat
gatagcgatagtctcggattgacgccgaaacaatctagcctgttggcactgaaggcactg
ggtggatgcatttggtatctgcagcgctctctcctggatcaacaagtcataccattagcg
acgttcgaacagtacattccgctggatgcgaagcctgataaaaccgcaggtgaaaccagc
gctcgcataggcgcagccaatgcaaacaggtacatggtactagattcaatcacactcaac
aatctcaagattatcggtggcgaaggatcgctcgccgatcgaatggatcactgctgtacc
aagttcggcaaacggctgttccatcattgggtctgtgtgcccagctgcgagctagaagta
atcgttcaacggcagcaggcggtaaccgaactgatcgatcatgtgacgctgctgcaagac
gtacgcgcactgttgggacagctgcccgacatggagcgcttggtaacgcagatccacgct
ttcggtaatgccacatgtagtggccggaatcacccggccggtagggccatcctgtatgaa
gagctcacgtatggcaagaagaagctgagcgatttcattgctaccttgaacggatttcgt
gcactgattggtctgccagatatgttcgataacgcgaaatccgaactgctcgtgcgcatc
acccaatctgcttcggtcggtggtgcattcccgatcgaaacgatgcgcaagcagctagca
ttctttgacaaagcgttcgatcacgagaaggccctcaagagtggggtgattgcaccggaa
cggggcgtcgacagcgagtacgatacggtcgaacgggagatcgagacattgaagacagag
ctggaagagtaccttgccgagcagagcaagttctttggatgcacggtggtgtactttggg
aacgacaagaaacgctatcagctggaggtgccggaggcgcgtgcgaaaaaagcaacgagc
gagtactcgctggaaagccaacgtgccggtaaaaacggggtcaagcgattccacaccgaa
gaaacacgccaattcttgcgtcaaatgacacagctagaggacaaacgtaaaatggtgctg
aaggatttggcgcgacgcatctttgagaaattctcgctcgagtacagcacgtggaagggc
tgtgtggagatggtggcaacgctcgatgtgctaacctctctggcggagtatgcacgatca
gagggtgtgtgctgtgtacccgaactattgccgaatggatccaacggcaagccactgatt
gagatcgaggagggtattcatccgtgcattgctagcgagctgatggaaagtttcataccg
aacggaataagcattggtggcgaaggaaaggccagtttagtgctgctaacaggacccaac
atgggcggaaagagtactttaatgcgacaggtcggtctgttggcggtaatggctcagatt
ggctcacggattccggccgagcgatgccgcatgacgctcgtggatcgcatcttcactcgg
cttggcgcgagcgacgatattatggccggccatagtacctttctggtggagttgaatgaa
acttctgccatactaaagcatgccaccagtgatagcttggtgttgctggacgagctgggt
cgcggaacggcgacttacgatggaacagccgtagcaggggccgttgtacacttcctagct
gatcgacaatgccgtacgctgttctcgacgcactaccacaatctggtggacagcttccat
gcggatccgagaatcgcactcgggcatatggcctgcatggtggagaatgaggaaggggat
gatccgacgcaggaaacggtcacattcctatacaagtatgctgacggaccgtgccccaaa
tcatatggcttcaatgcggccaagctggccggaatgccgatggctatcatcaaacgagcg
tacgagctctccaaaaaggtcgagcgcgacgcgctgaagcgtaaaattatgatgaagctg
gtaaagggcgcaccggagccggagataagggatctcgtcgcgaagctgcaaagctgtcgg
ttttag
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