Anopheles darlingi (American malaria mosquito): 125952473
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Entry
125952473 CDS
T11379
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
adar Anopheles darlingi (American malaria mosquito)
Pathway
adar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125952473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adar03019
]
125952473
Enzymes [BR:
adar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125952473
Messenger RNA biogenesis [BR:
adar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125952473
mRNA degradation factors
3'-5' decay
Ski complex
125952473
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_N
DEXQc_Suv3
ResIII
Helicase_C
MTR4_beta-barrel
MTR4-like_stalk
ATPase_2
Motif
Other DBs
NCBI-GeneID:
125952473
NCBI-ProteinID:
XP_049537898
LinkDB
All DBs
Position
2:47141724..47146069
Genome browser
AA seq
1249 aa
AA seq
DB search
MQEPDVDVLRAFIVEPQIPLHDPKRFYQPRQPTLELLYEIPNAPIGSRIVANRCAEMGRL
LDFVEVAIADAGANAKNSMSLQREPVEGESARGSASYFPFWPGGFEAPEAMINTVASADG
GDGDALLFDENNLKSCPPGFTNGIEFTKSGTSGSNRNATHGDTQAGAVVDLLSAIEDEEG
FTLLAEKVEPEATTTTTTRKESRPDGKTGTALELGEGEEEDLLATEGVQHRTAPVLNISA
NSGNNLQSAEWAEILDISKPVDDFYVKIPVMAHRFPFELDIFQKQAILKLEEHSHVFVAA
HTSAGKTVVAEYAIALSKKHLTKSIYTSPIKALSNQKYRDFKTTFQDVGLMTGDIQIDPT
ASCLIMTTEILRSMLYCGSDITRDLEYVIFDEVHYITDSERGHVWEEVLILLPDHVCIVM
LSATVPNTLEFANWVGKTKKKRVYVVSTAKRPVPLEHYLYTGFGGKSKSDCFLIVNEHSA
FTQEGYRKAKECMEVKQAKASGGGGPVMRNQKRTGPYSQKQEQTLWVGLIHHLKSQDKLP
VVAFTLSRNRCDSNADALLSCDLTTAREKYAINSFFQQCLHRLIPPDRALPQVRQMQSCL
ERGIGIHHSGILPILKEIVEMLFARGLVKILFATETFAMGVNMPARTVIFDSTRKFDGQC
VRPLQPSEYTQMAGRAGRRGLDKTGTVIIICKNEVPAESELKTMIMGKPVRLESQFRLTY
AMMLYLLRVELVTVENMMLHSFREFGKRQQIPQSKLELSKVQEKVSRLNKLGDHLQPLCD
FYHAAEESIRLWDEIMPKQLCQPKALNELKPGRVLVITEKQHYNKLALLLAISLQSHKDM
KLTVLVLDHQQQPASASEGPTKDKDDSVDRIDRGTLWHRMLSLATPYQSFIPEGVGGHKI
LVLGSANVVELTKQTIRCEAQKIIQNWETRQIPRFRDAPLSPAVIDAVASLSELQATLPD
GNALGVFESIPLKLLFDHVQLTNDLQKAQSRLAQYQPYTNIANFEHEFALVYDRMQLERK
LDDLKFQVSYESMSLYPDYCRKLEVLQDLKYIDDMHQVAMKGRVACEMGQNELMITELVM
RNILTDLQPAEIAALLSSLVFQAKTDVSPKLTETLEKAVVQFREVENDIRSVERQHGVME
VVKKEELNFGLVEVVYEWACNKPFAEIMTLTDIKEGIIVRCIQQLNETLCNVKDAARIIG
DPVLHSKMEEASNAIKRDIVFAASLYTSSTPVVIVEEQPTNSSDLLNRL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaccggacgtggatgttttgcgggcgttcatagtcgagccgcagattccgctg
cacgatccgaagcggttctaccagccacggcaaccgacgctggaactgctgtacgagata
cctaacgcaccgatcggcagccggatcgtagcgaatcgctgtgccgagatggggcgcttg
ttggactttgtcgaggtggcgattgcggatgccggtgcgaatgcgaaaaactcgatgtcc
ctgcagcgggaaccggtggagggagaatcggcccgcgggtccgcctcgtacttcccattt
tggcccggtggctttgaggctccggaggcaatgattaacactgtcgcatcagcggacggt
ggcgatggcgatgcgctgctgttcgacgagaacaacctgaaatcctgtccacccggattt
acgaatggaatcgagtttacgaagagcggtacgagtggcagcaaccgaaatgcaacgcat
ggtgacacgcaggccggtgccgtggtggatcttttgtcagcgatcgaggatgaggaagga
tttacgctgttggccgagaaggttgagccagaggctacaaccaccaccaccacccgaaaa
gagtcccgtccggacggcaaaaccggaacggctctagaactcggtgaaggtgaagaggaa
gatctgttggccacggaaggggttcagcataggacggctccggttctgaacatttcggcc
aacagtggcaataatctgcagtcggccgagtgggccgagatactggacatttcgaagccg
gtcgatgatttttacgtcaagataccggtaatggcacaccggtttccgttcgagctggac
atcttccagaagcaggccatactaaagctcgaggagcacagtcacgtgtttgtggcggct
cacacgtccgccggaaaaacggtggtcgcggagtatgcaatcgccctgtctaagaagcac
ctgacaaaaagcatctacacttctccgatcaaggcactgtcgaatcagaagtaccgtgat
tttaagaccaccttccaggatgtcggtctgatgacgggtgacatccagatcgatccgacc
gcttcctgtttgatcatgacgacggaaatcttacgctcgatgctgtactgcggcagtgat
atcacgcgcgatctcgagtacgtgatcttcgacgaggtgcactacatcacggactctgag
cggggtcatgtgtgggaagaggtgctgatcttgctgcccgatcatgtgtgcatcgtcatg
ctgagtgcgaccgtgcccaatacgctcgagtttgcgaattgggttggaaagacgaagaaa
aagcgggtgtacgtggtgagcacggcgaagcgtcccgtgccactagaacactatctgtac
acgggctttggcggtaagtcgaagagcgattgcttcctgatcgtgaacgaacacagtgcg
ttcacgcaggaaggctatcgaaaggccaaagagtgtatggaagtgaaacaggccaaagca
tccggtggtggtggtccggtgatgcgaaaccagaagcgcacgggaccgtacagtcagaag
caggagcaaacgctctgggttggattgatccaccatttgaaaagccaggacaagctaccg
gtggtggcgtttacgttgtcacggaatcgttgcgatagcaacgcggacgcgctgctatcc
tgtgacttgacgacggcccgggaaaagtacgccatcaattccttcttccagcagtgtctg
cacaggctcattcctcctgatcgtgcgttaccacaggtacggcagatgcagagttgcctc
gagcgtggtatcggcatccaccatagcggtattttgccgatcctgaaggagatcgttgag
atgctgtttgcgcgcggactggtaaagatcctgtttgcgacggaaacgtttgccatgggt
gttaacatgccggccaggacggttatcttcgatagtacgcgtaagttcgatggtcagtgt
gtgaggccactgcaaccgtccgagtatacgcagatggcgggacgtgcgggtcgtcgtgga
ttggacaagaccgggacggtcattatcatctgcaagaacgaggtaccggccgagagcgag
ctgaagacgatgataatgggtaagccggtgcggttagaatcccagttccggctgacgtac
gccatgatgctgtacctgttgcgcgtcgagctggtgacggtcgagaacatgatgctgcat
agcttccgggagtttggcaagcgacagcaaataccacagagcaaactggaactttccaag
gtacaggagaaggtatcgcggctcaataagctcggcgatcatctacagccactttgtgac
ttttatcatgccgcggaagaaagcatccgtttatgggatgaaataatgccgaaacaactg
tgccagccaaaggccttgaatgaactgaaaccgggccgagtgttggttataaccgagaag
cagcattacaacaagttggccctactgctggccatctcgttgcaatcgcataaagatatg
aaactgacggtgctggtgttggaccatcagcaacagccagcatcggcgagcgagggacca
acaaaggacaaggacgactcggtggaccggatagacaggggtaccttatggcaccggatg
ctctcgctggccacaccgtatcaatctttcatcccggaaggtgtcggtgggcataagatt
ctcgtgctagggtcagcgaatgtggtcgagctgacgaagcaaacaatccgctgtgaggca
cagaagattatccaaaactgggaaacgcgacagataccacggttccgggatgcgccactg
tcaccggccgtcatcgatgccgtcgctagtttgagcgagctgcaggcaacgctaccagac
gggaatgcactcggtgtgttcgaatcgattcccttgaagctgctgttcgatcacgtccag
ctaacgaacgacctgcagaaggctcaaagtaggttggcccagtatcaaccgtacacgaac
attgccaactttgagcacgagttcgcgctcgtgtacgatcggatgcagctcgagcggaag
ctggatgatctcaagtttcaggtgtcgtacgaaagcatgtccctgtatccggactactgc
cggaagctggaggtacttcaggatctgaagtacatcgatgatatgcatcaagtggccatg
aagggacgcgttgcttgcgagatgggccagaacgagctgatgatcacggagctggtgatg
cgcaacattctgactgacctgcagccggccgaaattgccgcccttctatcgagtctggtg
tttcaggccaaaaccgacgtttcaccgaagcttacggaaacgctcgaaaaggctgtagta
cagttccgggaggtggagaatgacatccgttcggtcgaacggcagcacggtgtgatggag
gtggtcaagaaggaagagctcaactttggtctggtcgaggtggtgtacgagtgggcctgt
aataaaccgtttgcagagattatgacgcttacggacattaaggagggtatcatcgtgcga
tgtattcaacagctgaatgaaacgctctgcaacgtgaaggatgctgcacgcattatcggt
gatccggtgctgcacagcaagatggaggaagcatcgaatgcgatcaagcgggatattgtg
ttcgctgccagtttgtacacctccagcacaccggtcgttatcgtcgaagagcagccgacc
aacagcagcgacctgcttaatagattgtaa
DBGET
integrated database retrieval system
