Anopheles darlingi (American malaria mosquito): 125953591
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Entry
125953591 CDS
T11379
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
adar Anopheles darlingi (American malaria mosquito)
Pathway
adar04512
ECM-receptor interaction
adar04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
adar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125953591
04518 Integrin signaling
125953591
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
adar00536
]
125953591
Glycosaminoglycan binding proteins [BR:
adar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125953591
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC_Sas
VWA_N2
Motif
Other DBs
NCBI-GeneID:
125953591
NCBI-ProteinID:
XP_049539204
LinkDB
All DBs
Position
3:complement(1647558..1653808)
Genome browser
AA seq
1566 aa
AA seq
DB search
MKLRLGRPLLLAVFFIIVIFADHIRCEEEPSATAAKPAKKKTKKSKTKKLATKNLKKARP
DRPQADRPQAQAPEYDNAYDYNESYDYGEGDTDYEGENASNRRSETGFRQPDDEVPRERV
VVTSTTPRAPEPEAIVQPFTCYYEGSWYRENDVFQSGYQGCATCRCRNTVVTCDDADCPR
VTPEPRTTSTTTTTTTTTTTTEKPEFDASAVGNRYPAAPVGEPGIPGEAGQPGLPGTPGI
PGPAGPPGPAPDLTFYTQQLQESMGGADKGPGPENFQFMQAQVGPVGPRGPPGPAGPTGP
QGFQGTRGEAGEPGPPGVGGPPGPRGLPGAPGKDGAAGDDGETGPQGPVGLPGPRGLPGM
PGVPGLKGHQGLPGPEGTKGETGAIGEKGSVGSTGPAGVAGATGPSGPRGERGREGPPGP
PGLRGIDGIAGPAGPPGPVGNPGPPGFPGSNGAKGDMGAAGPKGSQGPQGPRGESGRPGQ
PGEPGLNGPPGKDGIPGEKGSPGSTGLAGPPGFPGARGSPGENGSPGDSGPKGEPGFPGE
RGYKGEAGIKGEAGTPGPRGLPGAVGPEGKRGKRGMRGPAGLSGPQGERGLPGSPGLPGP
DGAQGVKGQSGDRGAMGPQGPKGSSGDPGSPGPAGIQGLRGQPGRPGAQGKAGSPGERGL
PGADGKVGEPGVQGLQGLPGPIGLPGDKGFTGEPGKDGDIGPPGAVGPRGDAGKDGPPGI
SGPPGPPGNDGERGPPGASGPRGFQGLPGTPGNPGAQGKDGQNGPPGQPGPIGQQGARGE
RGFPGERGPVGNPGTPGLRGEPGVQGNDGPPGPAGANGMKGHQGAPGMVGMPGLRGPAGP
AGEKGERGSSGPTGPEGPAGRIGERGLQGPMGPPGPPGEPAEKGEPGNAGTPGEPGAAGA
VGDRGPVGPQGLQGFPGPQGPVGAPGSKGDRGSMGLKGEQGNSGLPGVPGEAGPQGLIGL
TGSKGARGEPGLRGESGPMGTPGRPGDQGPIGQTGNPGSPGTPGTPGIKGNPGDTGRPGN
AGPQGLPGPQGIEGLKGEAGSDGPPGPPGNQGPHGVPGDRGLPGLPGPQGAQGSRGMRGA
AGEAGHPGKPGNDGPPGPPGQLGPAGPPGPTGDTGPEGLPGKQGPPGLAGRAGDKGPVGA
QGPQGTSGAPGLPGPPGPQGPAGLTGERGLRGETGPQGTDGPPGPRGKAGPPGIEGPKGD
NGEPGMKGVKGHRGLIGLQGLPGPAGPPGDKGNVGNEGPSGKPGEPGPRGPPGRDGSIGP
QGMLGGSGPRGPPGNDGKPGQPGNPGPPGPPGPPGDGIGYDAAALAALLGHGQMSNTKGP
DPNQGDEPMNLGRVFELTDEERQKLVENAYEKLKTAFGTFKNPDGKQGSPAKTCRDLFVA
HPEFTSGHYWIDPNEGDARDSILVYCDAQKKASCVLPQPLRTKEIVYDGDEEEVWLGELK
EGMKITYKSDSNQIGFLQLLSATASQNITYHCRNSVAFFNKEKNSYRQSLKLLAWNDAEL
TARGPQRLRYEALQDDCQHRAAHYGQSVLSYSTDKPTRLPIIDIAIRDIGDADQQFWIEI
GAVCFQ
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacgtctggggcgccccctgctgctggcagtgttctttatcattgtgatattc
gccgaccacatacgatgtgaggaggaaccatcggccacggcggctaagccggccaaaaag
aagacgaaaaaaagcaaaaccaagaagctggctacaaagaatctcaagaaggcacgcccg
gatcgcccacaggccgatcgaccgcaagcacaggcccccgagtacgacaacgcctacgac
tacaacgaatcctatgactatggcgagggtgatacggactacgaaggcgaaaatgcctcg
aaccgacgttccgagaccggctttcggcaaccggatgacgaggttcctcgggaacgcgtg
gttgtcactagcaccacaccgcgcgctccggaaccggaagcgatcgttcaaccgttcact
tgctattacgaaggttcgtggtaccgggagaacgatgtcttccagtcgggataccaaggt
tgtgccacttgccggtgccgtaatactgtcgtcacgtgcgacgatgccgattgtcctcgt
gtaacaccggaaccgagaacgacatccaccacaaccaccaccaccaccaccacgacaacc
acggagaagcccgagtttgatgcatctgccgttggcaatcgatatccggcggcacctgtc
ggtgaaccaggcattccgggagaggcgggccagccgggattgccgggtactcctggcatt
ccaggaccagcggggccaccaggaccagcaccggatctaacgttctacacccaacagctg
caagagtccatgggtggtgctgataagggcccgggaccggaaaacttccagtttatgcag
gcacaggttggaccagtgggtccgaggggtccaccgggacctgccggacctacgggacct
caaggattccaaggaacgcgtggtgaagcgggagaaccgggcccacccggggttgggggt
cctccaggacctcgtggactgcctggtgcacctggcaaagatggtgcggctggagatgat
ggtgaaaccggtccgcaagggccagttggtttaccgggaccacggggtctacccggaatg
cccggcgttccggggcttaaaggtcatcaagggttgccaggaccggaaggcacgaaagga
gaaaccggagcgattggagagaagggatccgttggatctacgggtcctgcaggagttgct
ggtgcgaccggaccttctgggcctcgaggcgaacgtggacgtgaaggaccaccgggacca
ccgggtttgagaggcatcgatggaattgctggccctgcaggaccaccgggacctgtagga
aacccgggtccacctggattccctggcagcaatggagctaaaggtgatatgggtgccgcg
ggtccgaaaggcagccaaggaccgcaaggacctcgaggagagtctggacgaccaggtcag
ccaggagaaccaggattgaatggacctccaggcaaggatggtattccgggagagaaggga
agtccgggatccacgggactggctggtccccccggatttccgggtgctcgtggttctccg
ggggagaacggtagtccaggagatagtggcccgaaaggcgaaccaggattccccggtgaa
cgaggctataagggagaagcaggcatcaaaggtgaagctggcacgccaggacctcgggga
ttgccgggagcggttggaccggaaggcaaacgaggcaaacgaggaatgaggggtcctgct
ggattgtccggtcctcagggtgaacgtggtctacctggatctcccgggctgcctggaccg
gacggtgctcaaggcgtgaagggacaatcaggagatcgtggagctatgggaccacaagga
ccgaagggatcgagtggagaccccggatcaccaggtccagcaggtattcaaggactacga
ggacaaccaggtcgtcctggagcgcaaggaaaagctggatctccgggagagcgcggcctg
cctggagctgacggtaaagttggtgagccgggagtccaaggactgcagggtcttcctggc
ccgatcggtttgccaggagataagggtttcacgggagaacctggcaaggatggcgacatt
ggaccaccgggagctgtcggaccacgaggtgatgctggaaaagatggacctccaggtatt
tcgggcccgccaggcccaccgggtaacgatggagaacgtggcccaccgggagcgagcgga
ccgagaggttttcaagggcttccggggactcctggaaatcctggagcacaaggcaaagat
ggtcaaaatggccccccaggacaaccaggacccattggacagcaaggtgctcgtggtgaa
cgagggttcccgggagagaggggccccgtcggcaatccaggaactccgggactgcgcggt
gagccaggagttcaaggaaacgatggaccaccgggacctgctggagcaaatggaatgaag
ggacatcaaggagcaccgggaatggtcggaatgcccggtttgagaggacctgctggacct
gctggcgagaagggtgaacgaggcagttcgggaccgacgggaccggagggtcctgctgga
cgaattggagaacgtggacttcagggccccatgggtccaccaggaccaccgggagagcca
gctgaaaagggcgaaccaggcaatgcgggcactccgggagagccaggagcagcaggagct
gtcggtgatcgcggtccggtcggtccgcaaggtctccaaggtttccccggaccacaggga
ccggttggtgcccctggatccaagggcgatcgaggaagcatgggtctaaagggagaacaa
ggaaattcaggacttccaggagttccaggcgaagcaggcccacaaggattgatcggtctt
acgggctccaagggtgctcgaggagagcctggactgcgcggagaatctggaccaatgggc
actccgggacgaccaggagatcaaggacctattggtcaaactggaaatcctggttctcca
ggtacgccgggtactccaggcattaaaggaaatcccggagatacgggtcgtcccggaaat
gcaggaccccagggattgccaggacctcaaggaatcgaaggcttgaagggagaagctggc
agtgatggacctccgggacctccagggaaccaaggccctcatggtgtgcccggtgatcgt
gggctaccgggactgcctggtcctcaaggtgctcaaggctcacggggcatgagaggtgcg
gcaggtgaggctggacatccaggaaaacccggcaacgatggtccacccggtccgccgggt
caattgggacccgctggcccaccgggccctacgggagataccggcccagaaggtttgcca
ggcaaacagggtccaccaggactggccggtcgagccggagacaagggaccggttggagcc
caaggacctcagggtacttccggtgctcctggcttgcctggaccgcctggaccgcaagga
cccgccggcctgactggtgaacgtggattacgaggtgaaactggaccgcaaggaaccgat
ggacctccaggaccgcgtggaaaagctggaccgccaggcattgagggaccaaagggagac
aacggagaaccgggaatgaagggcgtaaagggtcatcgaggattgatcggtctgcaaggc
ttaccgggacctgctggtccaccaggagacaagggcaacgttggcaacgaaggaccctcc
ggcaaaccaggtgagcctggcccaagaggtccacctggtcgcgatggatccattggacca
cagggaatgctgggtggttcaggacctcgtggtcctcctggaaatgatggcaaaccggga
caaccgggtaatcctggacctcctggcccaccaggaccaccgggcgatggcattggttac
gatgctgctgcacttgctgcacttcttggccatggtcaaatgagcaacaccaagggtccg
gatcctaaccaaggcgatgagccaatgaatcttggccgtgtattcgaactgacggacgaa
gaacggcagaagctggtggagaatgcttacgagaagctgaagactgccttcggtacgttc
aagaatccggatggcaagcagggttcaccggccaagacgtgtcgcgatctgttcgtagcc
catcccgaattcacttcgggacactactggatcgatccgaatgaaggtgatgcccgagat
tccatcctggtatactgcgacgcccagaagaaggcttcctgtgtgctgccgcagccactc
cgcaccaaagagattgtttacgatggcgacgaagaagaggtgtggcttggtgagctgaag
gaaggcatgaagatcacctacaagtcggacagcaaccagatcggcttccttcagcttcta
tcggccactgcctcccagaacattacgtatcactgccggaacagtgtggcgttcttcaac
aaggagaagaatagctaccgacagagcttgaaactgttggcctggaacgatgctgagctg
acggctcgtggaccgcaacgactgcggtacgaggctttgcaggacgattgccagcaccgt
gcggcccattatggccaatcggtactgagctacagcacggataagccaacgcgattgcca
atcatcgatatcgccattcgcgatattggagacgctgaccagcagttctggatcgagatc
ggggcggtctgcttccagtga
DBGET
integrated database retrieval system
