Anopheles darlingi (American malaria mosquito): 125959034
Help
Entry
125959034 CDS
T11379
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
adar Anopheles darlingi (American malaria mosquito)
Pathway
adar04382
Cornified envelope formation
adar04512
ECM-receptor interaction
adar04518
Integrin signaling
adar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
adar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125959034
04518 Integrin signaling
125959034
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125959034
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125959034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
adar04147
]
125959034
00536 Glycosaminoglycan binding proteins [BR:
adar00536
]
125959034
Exosome [BR:
adar04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
125959034
Glycosaminoglycan binding proteins [BR:
adar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125959034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
125959034
NCBI-ProteinID:
XP_049547715
LinkDB
All DBs
Position
2
Genome browser
AA seq
1814 aa
AA seq
DB search
MIRPTVPRLLGGLGTKDTGMAGTGLGLALLLLSLLQLLHPSAAATCNQTVCDCDGLKGTQ
GQIGPHGVPGMGGDPGDVGFDGPFGPRGEPGNAGEVGTTGPKGYRGDVGERGPMGAFGYA
GLPGEPGFRGPFGIDGCNGTDGAMGSPGYPGPPGPRGPQGPPGAQGYRGDSGEGGINSKG
TKGEKGVGGIPGQPGLRGFAGEWGPRGYDGIPGTPGDDGRYGLKGDKGDPSPPLCPGEPG
EPGAPFYSLYAKNGTVNIGVKGQPGVAGPDGLPGQHGMKGDSGMQGERGTKGFKGEEGAI
GDRGKQGKEGPPGATGEKGEKGAPGYAGRDGEDGDKGPMGDDGLAGRPGQQGAPGAKGEY
RPELAPIVIGPQGPQGDVGPPGRAGMAGIPGMKGRRGPMGPPGPPGDPGLDGARGKIGIS
IHGQRGDDGESGPRGLIGSRGLPGTPGTKGQPGFPGRNMQGPNGEPGTPGLNGEYGESGD
QGDDGEPGDKGLPGIGYNITGPPGPAGLPGRAGPPGDWGFDGYAGQKGDKGFRGDDCGTC
PPGPKGGKGDAGDIGQPGLDGYDGRRGLPGPRGIKGIYGKPGVRGEKGRKGESGDSGEAG
RPGPPGIPGRLIDSVSQRRADSGDDGTFGPRGEQGETGVPGDTGPIGYDGRPGEQGEYGD
DGEPGRPGQDGLPGMSGRDGQPGRDAVVNQYNEWSIRGVPGAPGDPGPKGERGDQGDRGE
AGATSEMDFLIIGDKGVIGEPGDPGQKGEKGYKGEMGFLGLRGVDGPPGLQGVSLQGPEG
FKGYYGIIGDHGLPGLAGVDGIPGPDGIPGLQGLRGQRGDPGRPILVGEKGVEGEGGFYG
EIGDKGFKGPDGVRGPNGVTGVKGEVGEPGLYGTPGLRGNKGQMGDIVYGDRGAPGAPGR
DGRAAAFGDKGVRGAPGPEGLQGPKGETGSIGRDGLPGLAGEDGQPGERGFPGRMGDMGE
EGETGDRGPQGDIGYPGLSGARGLPGFRGPKGLSGDPGDMGLPGRDGALGRKGERGDIGD
TGPPGVKGGASFSGMKGEVGEPGRRGPPGYNAPTGRMGRKGEEGDAGLLIEGRPGIKGQK
GAPGYNGLPGRPGFKGERGDEGVFGQKGIAGDKGRDGYPGIAGRPGRVGPRGPIGPRGAS
GQRGETGEPGVDGPPGFYGEKGLRGDIGPVGYTGQPGQRGDPGFAGLPGNVISKLAQKGE
QGDPAPEGPEGDQGPPGLKGQRGYQGRKGNQGPAGYPGMVGIEGHDGPKGQRGEPGIKGQ
PGDLYEPPERGDAGDAGYDGFAGRPGLPGQKGAPGDYGDNGPIGMIGLPGFVNGALKGSK
GDVGFEGPPGLDGLPGLPGVEGQPGPVGVRGLPGSIGPVMPGFRGDPGEDGLPGLEGMPG
PTGFPGDRGSPGLPGLRGISGPRGEVGDVGEEGFHGRIGVKGVKGEVGDLPSLINWRPTQ
PGDRGLSGSRGLPGDEGDVGPPGYPGLRGPKGLPGPTGEEGPPGQPGIKGERGLTGAPGI
DGLDGLPGLPGIPGDDAAPRPPPNNLGYLFTRHSQKVAIPECPINTYKLWDGYSLSSVIA
SSRSVGQDLGMAGSCLRRFSTMPFMFCDINNVCNYAANNDDTIWLATAEPMPMSMAPIAA
DEVERYISRCSVCESNTRVMALHSQSMSIPNCPTGWEELWLGYSYVMHTSDNSGGFGQDF
VSPGSCLEEFRPQPVIECHGHGTCNFYDGVSSFWLTIIDEAMQFNRPQQQTLKAHQTSKV
SRCIVCRRKPSIMPTLDGGSISASALRSPPTDTVARPQYPPARYSPAGGRRPGTGRVLPG
RTRPRSRNPQPQQG
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgatccggcccacggtccccaggctcttggggggcctgggaactaaggataccgggatg
gccggaaccgggctcggtctggcgctactacttctatccctacttcagctactacacccg
tcagcggctgcgacttgcaatcagacggtgtgtgattgtgatggacttaaaggcacgcag
ggacagattggaccacatggcgtacccggtatgggtggcgatccaggagacgtaggattc
gacggaccattcggcccacgcggcgaaccgggtaatgccggagaggtcggcacaacgggt
ccaaaaggctatcgcggagacgtaggagaacgaggtccaatgggagcgttcggttatgct
gggcttcccggtgaaccaggcttccgtggtccgttcggaatcgatggttgcaacggaacg
gacggagcgatgggttcccccggctatcctggtccgcccggtccacgcggtcctcaggga
cctcccggtgctcaaggctatcgtggagactccggcgaaggtggcatcaactcgaagggc
accaagggtgagaagggggtcggtggaattccgggccagcccggtttgcggggttttgcg
ggcgagtggggtccccgcggatacgatggtattcccggtacgcctggagatgatggccgg
tatggtctgaagggagataagggcgatccaagcccaccgctctgccccggcgagccgggt
gaacccggtgcacccttctattcgctgtacgccaagaacggaacggtcaacatcggtgta
aagggtcaaccgggtgtggccgggcccgacggactacccggacagcacggtatgaagggt
gattccggaatgcagggtgaacgaggcacgaagggtttcaagggtgaggaaggcgccatc
ggtgaccgtggcaagcagggtaaggaaggtccaccgggtgcgaccggtgagaagggagag
aagggtgccccgggatatgccggacgggatggcgaggacggtgataagggaccgatggga
gacgatggtctagcgggacggccgggacaacaaggagctccgggagcgaagggcgagtac
cggccggaactggcaccgatcgttattggcccccaaggacctcaaggagacgttggaccc
ccaggacgggccggaatggccggcattcccggtatgaagggacggcgtggtccgatggga
ccaccgggaccaccgggagatccgggactcgatggagcccgcggtaagatcggcatctcg
atccatggccaacggggagatgacggagaaagtggtccacgaggtttgatcggttcgcgc
ggactgcccggcacgcccggtacgaaaggccaacccggtttcccgggacgcaacatgcaa
ggaccgaacggagaacccggaacgcccggattgaacggagagtacggtgagagcggcgat
cagggcgacgatggagagccgggtgataagggattgccgggaatcggttacaacatcacc
gggccacccggtccagctggattgcctggccgtgccggtccacccggagactggggtttc
gatggttacgccggccagaaaggagacaaaggattccgtggtgatgactgtggtacctgt
ccaccgggaccgaaaggagggaagggagatgcgggcgatatcggacagcccggactcgat
ggatacgatggtcgccgaggattgccaggaccacgaggcatcaagggcatctacggtaaa
ccgggcgtgcgaggtgaaaagggccgtaaaggtgaaagcggagactccggtgaagccgga
agaccgggaccaccaggaatacctggaaggctgatcgatagcgttagtcagcgaagggcc
gattctggcgatgacggaacctttggaccacgtggtgagcaaggagaaaccggagttcct
ggtgataccggaccgatcggctacgatggacgacccggtgaacagggagagtacggcgac
gatggtgaaccgggacgccccggacaggatggtctgcccggaatgtccggacgtgatgga
cagcctggtcgcgatgccgtggtcaatcagtacaacgaatggtcgattcgcggtgtaccc
ggagctcctggtgatcctggaccgaagggagagcgtggtgaccagggagatcggggtgag
gccggtgcgacgtcggaaatggatttcctgatcattggcgataagggcgtgatcggcgaa
ccgggagaccccggacagaagggcgagaagggctacaaaggtgagatgggattcctcgga
ttgcgcggagtagacggaccacccggtctccagggcgtcagtcttcagggtccggaagga
ttcaagggatattacggcatcatcggcgaccatggactgcccggtctggccggtgtcgat
ggaattcccggtccggacggtattccgggtttgcagggtttgcgcggccagcgtggtgac
cccggccggccgatactggtgggtgagaagggcgtcgaaggtgaaggtggtttctatgga
gagatcggcgataaaggcttcaaggggccggatggagtacgtggaccaaacggtgtgacg
ggtgtgaagggcgaagttggcgaaccgggactctacggaactccgggattgcgtggcaac
aagggccagatgggagacatcgtgtacggtgaccgaggtgctccgggtgctcctggacgt
gatggacgtgcggccgcgttcggtgataagggtgtgcgtggtgcacctggccccgaagga
ctccaaggaccgaagggagagacgggcagcatcggtcgcgatggattaccaggtctggcc
ggtgaagacggacaacccggtgagcgtggattcccgggtagaatgggcgatatgggagag
gaaggcgaaactggtgaccgtggaccccaaggcgatatcggataccctggactgagcggt
gcccgtggacttcctggattccgtggaccaaagggattgtccggagatcccggcgatatg
ggattgcccggacgcgatggtgcgctgggcaggaaaggagaacggggtgacatcggagat
acgggaccaccgggagtcaagggtggtgcgtcgttcagcggaatgaagggagaagttggt
gaaccgggaagacgtggtccacccggttacaatgcccctaccgggcgaatgggacgcaaa
ggtgaagaaggtgacgcagggctgctgatcgaaggtcgtccgggcatcaagggacagaaa
ggtgcccccggatacaatggactccctgggcggccaggcttcaagggtgagcgtggtgat
gaaggcgtcttcgggcagaagggtattgccggagataagggccgagatgggtatcctggt
atcgcaggacgcccgggacgtgttggaccacgtggaccgattggtccacgaggtgcgtcc
ggacagcgtggtgaaaccggagagccaggtgttgacggaccgccaggattctacggtgag
aaggggctgcgtggagatatcggaccagtcggatacaccggacagcctggacaacgtgga
gatcctggattcgccggattacccggaaacgttatttcaaagctggcccagaagggagag
caaggagatccggcaccggaaggcccagaaggtgatcaaggtccaccgggtctgaagggt
cagcgaggataccagggacgcaagggcaaccaagggccggccggatatccgggaatggtc
ggcatcgagggacacgacggaccgaagggacagcgcggtgaaccgggcatcaaaggacaa
cctggagatctgtacgagccaccagagcgtggtgatgctggtgatgcaggatacgatgga
ttcgccggacgtcccggactcccggggcaaaagggagctcctggagattatggtgataac
ggacctatcggtatgatcggtctgccgggcttcgttaacggtgcgctaaagggcagcaag
ggagacgtcggtttcgagggacctccggggctcgacggactaccgggattgcccggtgtc
gaaggacaacctggcccggtgggtgtacgcggattgccgggaagcatcggacccgtgatg
cctggtttccgaggagatccgggagaggacggattgccgggattggagggaatgccaggg
cctaccggattccctggagatcggggaagtcccggtctaccaggacttcggggcatttcc
ggaccacgaggagaagtgggagatgtcggtgaagaaggtttccacggacggatcggagtg
aagggcgttaaaggtgaggtgggagatctgccatcgctcatcaactggcggccaacgcaa
ccgggcgaccggggactttccggaagccgaggtttgcccggtgatgaaggcgatgtcggt
ccaccgggctatccgggattgcgcggtccgaagggtctaccgggaccgaccggtgaggaa
ggacctccgggacaaccgggcatcaaaggagaacgaggtttgaccggtgcccccggtatc
gatgggctcgatggacttccgggcttaccgggaatacctggagatgatgcggcaccacgg
ccgcctccgaacaacctcggatatctcttcacgcgccactcgcaaaaggtggccattccc
gaatgcccgatcaacacgtacaagctgtgggatggatactcgctctccagtgtgatcgcc
agtagtcgctcggttggacaggatcttggaatggcgggctcgtgtttacggcgcttcagc
acgatgccgttcatgttctgtgatatcaacaatgtctgcaactacgccgcaaacaatgac
gatacgatctggctggcgacggccgaacccatgcccatgtcgatggcccccatcgcagcc
gacgaggtcgagcgctacatctcgcgctgcagcgtttgtgaatcgaacacacgtgtcatg
gcactccacagtcagtccatgtcgataccgaattgccccacaggatgggaggaactgtgg
cttggctatagctacgtaatgcacacgtccgacaattccggtggctttgggcaagacttt
gtgtcgcctggttcgtgtttggaggagttccgaccacagcccgtcatcgagtgtcacggt
catggtacgtgcaacttctacgacggcgtttcctccttctggttgaccatcatcgatgag
gcgatgcagttcaatcgaccacagcagcaaacgctgaaagcacaccagacaagcaaagtg
agccggtgcattgtctgtcggcgaaagcccagcatcatgccgacgttggatggtggttcg
attagtgcttccgcgctgcgcagtccaccgacggataccgtagccagaccgcagtatcca
ccggcacgctacagtcctgctggtggcagacgacctggtacgggacgggtgctccctgga
cggacgcgcccgcgtagccgcaacccacaaccgcagcaaggttag
DBGET
integrated database retrieval system
