Anopheles darlingi (American malaria mosquito): 125959755
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Entry
125959755 CDS
T11379
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
adar Anopheles darlingi (American malaria mosquito)
Pathway
adar03013
Nucleocytoplasmic transport
adar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125959755
03015 mRNA surveillance pathway
125959755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adar03019
]
125959755
Enzymes [BR:
adar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125959755
5.6.2.5 RNA 5'-3' helicase
125959755
Messenger RNA biogenesis [BR:
adar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125959755
mRNA cycle factors
Common to processing body (P body) and stress granule
125959755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
NAT10_TcmA_helicase
NPHP3_N
DEAD
AAA_22
ATPase
nSTAND3
SRP54
AAA_32
AAA_16
AAA_5
AAA_7
Motif
Other DBs
NCBI-GeneID:
125959755
NCBI-ProteinID:
XP_049548636
LinkDB
All DBs
Position
2:complement(2481424..2486072)
Genome browser
AA seq
1177 aa
AA seq
DB search
MSVDAFDGTSGSLTFVDTEENFFVGADSQGSDFDFRDFTLPSQSQTQASQHDHLGGGSQV
NGFGRRIGVDPSKLSSITSAIGELQFEEDEDEVEPVENKQLPVHACRYCGIHEPSTVVMC
NICKKWFCNGRGNTSGSHIVNHLVRAKHREVTLHSDGPLGETVLECYSCATRNVFLLGFI
PARSDSVVVLLCRQPCAAQNSIKDMNWDQEQWKPLIADRCFLFWLVKVPSDQEQMRARQV
SAAQINKLEELWKENVDATFQDLEKPGIDKEPQPVQLRYVDGYQYQNTFGPLIKLEADYD
EKLKESQTQENIEIRWDTGLNKKTIAYFTLAKNDGDMKLMHGDELKLRYVGELHKPWSCL
GHVIKVPDNYGDDVGLELKHNHQAPVECTVNFAVDFIWKGTSFERMQQALRKFAMDAKSV
SNYIYSRLLGNVRADGNEEVLFRFTLPKHFSAPNLPDLNRSQVYAVRHALQRPLSLIQGP
PGTGKTVTSATIVYQLAKLNSGPILVCAPSNTAVDQLTEKIHRTNLKVVRVCARSREAID
SPVSYLALHNQIRNMAQNTELKKLQQLKDETGELSLSDERRYRSLKKQAERELLEAADVI
CCTCVGAGDLRLQRLKFNSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCK
KAAKAGLSQSLFERLVALGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLK
VDFPWPSPDCPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPEQIGIIT
PYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLN
DPRRLNVALTRAKYGIIIVGNPKVLSKQELWNHLLNFYKDKKVLVEGSLNNLKESMIQFT
KPKKLVNTLNPGSHFMNNVMYDAKEVLGAGGFFDRTTSSVTAGFGHNSLTASFGSGMQSY
HPHASGGLMDMGSGQGLGSAGGGGGGGGTLGNSGAAVPLDAFMRKMHDPIGYISPHRAHQ
AVNNMPVPVGMFINMSNIPPRFYQQQQAIQAAKQIRRPTATGSRGVDQLQGAAGAGTSTG
AAGPSGSKSSNRPRPIGPPSQLGHVGSGSLTQGMSQGMSQPGFSLSQQPGLSQDYLGEYQ
SQMDNILSQDSHYNSQNGPGDRLVFDLPSDSKFPEPY
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggatgccttcgatgggacgagcggctcgctaacgttcgtcgatacggaggag
aactttttcgtcggtgcggactcgcaggggtcggacttcgatttccgcgactttacgctt
ccgtcgcagagccagacgcaagcgtctcagcatgatcatctgggagggggcagccaggta
aatggtttcgggcgtcggattggtgtggatccgtcgaagctgtccagcatcacctcggcg
atcggtgagctgcagttcgaggaggatgaagacgaagtggaaccggttgaaaacaagcag
ctgccggtccatgcctgtcggtactgtggtatccacgaaccgagcaccgtggtcatgtgt
aacatttgcaaaaagtggttctgcaacgggcgcggcaacacgtccgggtcacacatcgtg
aatcatctggtgcgcgccaagcaccgtgaggttacgctgcactccgacggaccgctcgga
gagacggtgctcgagtgttactcgtgcgctacaaggaacgtgtttttgctggggtttatt
ccggccagaagtgattcggtggtggtactgttgtgcagacaaccatgtgctgcgcaaaac
tccatcaaagatatgaactgggaccaggagcagtggaaaccactgatcgcggatcgttgc
ttcctgttttggctagtcaaagtgccgtccgatcaggagcagatgcgtgcgcgacaggta
tcggccgctcagatcaacaagctggaggagctgtggaaggagaacgttgatgcaacattt
caggacttggagaaaccaggcatcgacaaggaaccgcaaccagttcagctgcgctacgtg
gacggttaccagtatcagaacacgttcggtccgcttataaagctagaggccgactacgat
gagaagctgaaggaaagccagacgcaggaaaacatcgagatacgctgggacacgggattg
aacaagaaaacgatagcctacttcacgctggccaagaacgatggtgacatgaagctgatg
catggtgacgagttgaagctacggtacgtcggagagctgcataagccgtggagttgccta
ggccacgtcatcaaggtgccggacaactacggtgacgatgtggggctcgaattgaagcac
aatcatcaggctccggtcgagtgtacggttaactttgcggtggatttcatctggaagggc
acatcgttcgagcgtatgcagcaggctttgcgcaagtttgcgatggacgcgaagagcgtt
tccaactacatctactcacggctgctaggcaacgtgcgtgcagatggtaatgaggaagtg
ctgttccgattcacgctaccgaaacacttcagtgcaccgaatctgcccgatctcaaccgt
tcacaggtgtacgcggttcgtcatgcgcttcagcgaccactaagcctgattcagggccca
ccgggaacgggtaaaacggttacctccgctacgatcgtgtatcagctggccaagctgaac
agtggcccgatactggtttgtgcccccagtaataccgcagtcgatcaactgacggagaaa
atccatcgcaccaacctgaaggtagtgcgtgtatgtgcacgatcgcgtgaagcaatcgat
tcaccggtcagctaccttgccctgcacaaccagattcgtaatatggcccagaacacggag
ctgaagaagctgcagcagctgaaggatgaaaccggtgagctaagtctctccgatgagcga
cgctatcgatcgttgaagaaacaggccgaacgagagttgctcgaggcggctgacgttatc
tgctgtacgtgtgttggtgctggcgatctacggctgcagcgtctgaagttcaactccatt
ctgatcgacgaatcgatgcagtcgaccgaaccggaatgcatggtcccggtcgtgttggga
gctaagcagcttatactggtcggtgatcactgccagttgggacctgttgtaatgtgcaag
aaggccgccaaggccggactgtcgcagagtttattcgagcgattggtggcactaggcata
cgtccgttccggctcgaggtgcagtatcgtatgcacccggagctatcgcagttcccgtcc
aacttcttctacgaaggcagtctacagaatggggtgtgtgcggatgagcgcaagctgaag
gtggactttccttggccatcgcccgattgtccaatgtttttcctcgtaacacagggccag
gaagagatagctggttccggtacatcctacctgaatcgaacagaggcctcgaacgtcgaa
aaaattacgacccgcttcctgaaggcgggcatcaagccggaacagatcggtatcatcacg
ccgtacgaaggacagcgggcttacttggtgcagtacatgcagtatcagggctccctacac
tcgaagctataccaggagatcgagattgccagtgtggatgcgttccagggtcgcgagaag
gacataatcataatgtcgtgtgtgcgagccaacgaacatcaggggatcggttttctgaac
gatccgagacgtctgaatgtagcgcttacgcgggccaagtatggcatcattatcgtggga
aacccgaaggtgctctcaaagcaggaactgtggaatcatctgttgaatttttacaaggac
aagaaggtgctggtggagggttcgctgaacaatctgaaggaatcgatgatacagttcacg
aaaccgaagaagctcgtcaacacgctcaatcccggttcgcacttcatgaacaacgtgatg
tacgatgcaaaggaggtgcttggcgctggagggttcttcgatcgcacgacttcatcggtc
acggcgggcttcggtcataactcgcttacggctagctttggtagcggcatgcaatcctat
catcctcatgcgagtggtggcctaatggacatgggcagcggtcagggactgggatctgct
ggcggtggtggtggaggtggcggtacgttgggtaattctggtgccgccgtaccattggac
gcattcatgcgcaagatgcacgatcccatcggatacatttcgccccatcgcgctcatcaa
gcggtcaacaatatgccagtaccggtgggcatgtttatcaacatgtccaacataccgccc
cggttctaccagcagcagcaagcaattcaggctgctaaacagatccgtcgtccaacggca
accggtagtcgaggtgtcgatcagctgcagggagctgcaggtgctggaacgagcaccggt
gctgccggtccatcaggcagcaaatcatcgaaccgtccccgtccgatcggtccaccgagt
cagctcggacatgttggttcgggttcactgacgcaaggcatgtcgcaaggaatgtcacaa
cccggattcagcctttcccaacaaccaggtctctcacaggactacctgggcgagtatcag
tcgcagatggacaacatattgtcgcaggattcacactacaacagccagaacgggcccggt
gatcgattggtattcgatctgccatcggattcaaagttcccggaaccgtactga
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