Anopheles darlingi (American malaria mosquito): 125959916
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Entry
125959916 CDS
T11379
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
adar Anopheles darlingi (American malaria mosquito)
Pathway
adar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125959916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adar03019
]
125959916
Messenger RNA biogenesis [BR:
adar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125959916
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125959916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
125959916
NCBI-ProteinID:
XP_049548895
LinkDB
All DBs
Position
2:complement(62301363..62311798)
Genome browser
AA seq
2507 aa
AA seq
DB search
MNQEPFTYALSQISHFVSTVNKKNLAATSRQLAQLVKDFGLEADRHLLRCLFSSIDFGDA
TQSASRGFCQARLLATELASLSNKPQLVANVCFAVDNPFPQQKSLKPTANLLTQIAKTLS
CTPIQETAVSIALLNSKNPDTVRFAESHLQTCLTRLIETYIDSDTASNVEGNLNDVSPEF
LQQILSLIAYGQHRAYGLSDQTYTRFTHQLCRDFPRDRVPLILAPLLYAENSEISAEILK
LNTHSILKSSIMETSWKSLVLEVGYAFTATLDDCKNHLLKVGGREITPQDVAKIISSMCL
THPSLSESIINLPTPSAFWPQQDGDPSGAGKGGQGKDGQNGSVAQENGTWKPEVLVQALK
EVVPNLNWKEVCLAMDHPDFMLKDRAGLSLLLTIVKMGMQASNMGQHFPVECLYQRWSNS
EGQLSLISLILKNSDLYSFADHIYTSVSVELLKTPPETDNKEVAAWMSLHLVDVLLYIAD
QGLYVQVFDLFKIPMQLCPDILFLALLQINPPMTVPRQDLFTSLIPTFLGPHPNSGTILH
HAWNHTNFNMTLRHVILVSMSDWYMRGDSDQSRLSRILDVAQDLKALSNLLNVRSFMFII
DLACLASRREYLKLEKWLADKIREHGEPFVKSIIKFLHRRCPQIVAGSKYGGGGEESLPK
AAQLPPETLSTIIGCLQGCIGNVSPEVTEMIVSISQYGMLMNTKSRAQAPQPQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPPPGVLRPHRGLEAFGGSAMGGSPLFPP
TVESLTSLTANIGGLNIGGAVAGAGAGAAGAPGGSAFSFTNIIPTPASPSRLLPPSSSPF
PIMSLPPAAAAAAAAAAAAQAGSLGRLAQTPNDKLGIPNALAQSSPFADMGQNVSKEVED
EANSYFQRIYNHPPHPTLSIDEVLDMLQRFKDSPNRRENDVYQCMLRNLFEEYKFFPQYP
EKELQTTAQLFGGMVERNLVTTYVALGLALRCVLDALKKPEGTKMYYFGITALDRFKNKL
HLYPKYCEYVHSIPHFSEFPPHLIEYIEYGSQGQEAPNKTLGPGPLPPSITQFMPGTAGG
PVGNPLYRSNSVSGTSNLTPAAVTAAAGAVPGTPQGKINLGGQLAGGVSSVGSTGGVSSS
GGGGGGGGGGGGQPPRVKSIANATNIDTLLVATQDREEKIIAPPDAIQDKTAFIFNNLSL
VNLLQKCEEIKEILQKDYYAWLAQYLVLKRASIEVNFHVLYSNFLDALKIPEINRLVTKE
TFRNIRVLLRSDKGIANFSDRSLLKNLGHWLGMMTLGRNRPILHLDIDVKSLLVEAYNKG
QQELLYVVPFVAKVLESCAKSKVFKPPNPWTMSIMNLLAELHQEPDLKLNLKFEIEVLCK
NLNIDVADLKPAIYLKDPERAQSIEHQLSQPKPKEVVVLPQQQPLATSSTSIVGPSVVAA
GGVGVVDELGGGVGGAGPSSSPAAAAAAAGIDGSLGATGPPEPRFHYADINITSLAGIAP
HVTFSPNVALLHTQPHLKQIVKAALERTISEWITPIVERSVKISSKTCEQIVRKDFALDP
DDGRMRRAAHNMSRSLVAGMAMITCREQMLQTIQSSIKTGFMASLNHSQKEIEAAANQLA
LDNIELVSAFIQKTAIEKVATEMDKILAGDFELRKIARQEGRRYCDASVLAYQAERMPER
IRLSVGGVAPPQLAVYDEFARNIPGFLPITERDSALFAPKLPEVVPAISFATVPDEIGAM
YDELAAKMDAFIKTARLIPVLQGHASNMEHLLECLIHAHRSLEHVSGCALLHKAVDGLLE
GLVNIPEQLEHIKLYRDIHLRVMRLMQDARLFGPLWTNKVITRWLIECREDIRYNVEAVE
MLISSSFVNLEQYDLMLAQLMNNGNNYVAVVFGMQLLQTFFIDEQRHNSLLTEGDLAATM
EMLHRLTAHPRAPEGLAQLIEMLRANHDPNTFLVDRAIAGPTSYIHAGVAQARSDVDDPP
GFQERAEYLLKDWVAIHLNTSNSRDPLKGFSVFVAKMNMHGILKGDEPLTRFFRFATQYC
IDLTYRNMNEPAAKTKIFSFIDAYVRLIALLVKHSGESGNTSTKLNLLNKILGIVVGLLL
QDQEIHTTAFQQVGYHRIFVTLFLELSASDPVLENISLSVITAFCHTFHLLRPAAAPGFC
YSWLELISHRVFLGRILAMIPQQKGWYMYSQLLIDLFKYLAPFLRNAELAKPVHHLYKGT
LRVLLVLLHDFPEFLCDYHFAFCDVIPPNCIQMRNLILSPYPRSMRLPDPFTPNLKVDML
NDIGGSPRVSINYAAAIQPASFKKDLDSYLKARAPVTFLSELRSNLQISNDVGSRYNIPL
MNALVLYVGTQAIAHIRSKNLGPTMATIVHSAHMDIFQNLAVDLDTEGRYLFLNAIANQL
RYPNSHTHYFSCCILYLFGEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPV
YKFWEHDFVHCAPEIARLFESVAKSCMVSSKGQQQIQNSEPDIENCS
NT seq
7524 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagagcctttcacatacgccttatcgcagatcagtcactttgtgtcgaccgtg
aacaagaagaaccttgcggccacaagtcgtcagctagcgcagcttgtgaaagactttgga
ctcgaagcggaccgtcatttactgcgctgtctgttctcatcgatcgacttcggagacgcc
acacaatccgcatcccgtggtttttgccaggctcgcttgctggccactgaactcgcgagc
ctgtcaaacaaaccgcagctggtcgccaacgtttgcttcgccgtcgacaatccgttccca
cagcaaaagtccctgaagccaacggcaaatctgctcacacaaatcgcgaaaacactttcc
tgtacaccgattcaggaaacggccgtttcgatcgctctactcaactcgaaaaatccggac
acggtacgattcgccgaaagtcacctgcaaacgtgtcttacccgactcatcgagacatac
atcgattccgatactgccagcaacgtcgagggaaacttgaacgacgtttcacccgagttt
ctgcagcagatactatcgctgattgcgtacggtcagcaccgtgcctacggtctatcggat
caaacgtacacccgctttacgcaccagctgtgtcgcgattttccgcgcgatcgtgtcccg
ctcatcctagcaccactgctgtacgcggaaaactcggaaatatcggcggaaattttgaag
ctaaacacacacagcatactcaaatcatccatcatggaaacgtcctggaagagcctagtg
ctggaggttggttacgcgttcacggccacactggacgattgtaaaaaccatctgctgaag
gtaggcggccgggagatcacgccgcaggatgttgccaaaatcatttcctccatgtgcctc
acacacccgtccctttcggagagcatcatcaacctgccgacgccgagtgccttctggccg
cagcaggacggtgatccgtccggggccgggaagggtggccaaggaaaggatggccaaaat
ggttcggtagcgcaggagaacggcacctggaagccggaggtgctggtgcaagcgctgaag
gaagtggtcccgaacctgaactggaaggaggtatgcctggcgatggatcatccggatttt
atgctgaaagatcgcgccggtctctcgctcctgctgacgatcgtgaagatgggtatgcag
gcgagcaacatgggccagcatttcccggtcgagtgcctgtaccagcggtggtccaactcg
gaaggtcagctgtcgctgatctcgctcatcctgaagaactccgatctgtactcgttcgcg
gatcacatctacacgagcgtctcggtggagctgctcaagacccctccggaaacggacaac
aaggaggtggccgcctggatgtcactgcatctcgtggacgtgctgctgtacatcgccgac
caaggtctgtacgtgcaggtgttcgatctgttcaagataccgatgcagctgtgtccggac
attctgtttctggcgctgctgcagataaaccctccaatgacggtaccgaggcaggatctg
ttcaccagcctcataccgaccttcctggggcctcatccgaactcgggcaccatcctgcac
cacgcctggaaccacacgaacttcaacatgacgctccggcatgtcattctcgtttcgatg
tccgattggtacatgcgcggcgatagcgatcaatcacgtctttcccgtatcctggacgtc
gcacaggacctcaaagccctctcgaatctgctcaacgtacgctcgttcatgttcatcatc
gatctggcctgtctggcatcgaggcgcgagtatctgaagctggaaaagtggctagcggat
aagatccgggagcacggggaaccgtttgtcaagagcatcatcaagtttctgcatcggcgc
tgtccacagatcgtggccggcagcaagtacggtggtggtggtgaggagtctctaccgaag
gcagcgcagctaccaccggagacgctcagcacgatcatcggttgcctgcagggctgcatc
ggtaacgtgagccccgaagtgacggaaatgatcgttagcatctcacagtacggcatgctg
atgaacacaaagtcgcgcgcccaagcaccgcaaccccaacagcagcagcaacagcaacaa
cagcagcagcaacaacaacagcaacagcagcaacagcaacagcagcaacagcagcagcaa
caacagcagcaacagcagcagcagcaacaacaaccacctccacccggggtattgcgaccg
catcgtgggctggaagcatttggtggttcggcgatgggtggaagcccactgtttcctcct
accgtcgaatcgctcaccagtctcacggccaacatcggtggtttgaacattggtggtgcg
gtggcgggcgctggtgcaggtgctgccggtgcccccggtggcagcgcattcagcttcacc
aacatcatcccgacacccgcttccccgtcccgattgctgccaccatcgagcagtccgttt
ccgatcatgtcactgccaccggctgcggctgcagcggccgccgctgcagcagcagcacag
gccggttcccttggacggctagcccagacaccgaacgataagctgggcatcccgaacgcc
ctggcccaaagctcaccgttcgccgacatgggtcagaacgtatcgaaggaggtggaagac
gaggcaaatagctacttccagcggatctacaaccatccgccccatccgacgctctcgatc
gacgaggtgctcgatatgctgcagcgcttcaaggattcgccgaatcggcgcgagaacgac
gtgtaccagtgtatgctgcgcaatctgttcgaggagtacaagttcttcccgcagtatccg
gaaaaggaactgcagacgacggcccagctgtttgggggcatggtcgagcgcaacctcgtc
acaacgtacgtcgccctcgggctggccctccgctgtgtgctcgatgcgttgaagaaaccg
gaaggtacgaagatgtactacttcggtattacggcgctggatcggttcaagaataagctg
cacctgtacccgaagtactgcgagtacgttcactcgataccgcacttttccgagtttccg
cctcatctgatcgagtacatcgagtatgggtcgcagggtcaggaagcgccgaacaaaacg
ctcggtccgggaccactcccaccttcgatcacccagtttatgccgggcacagccggtgga
cccgtcgggaatccgctgtatcgcagcaattccgtatcggggacgagcaatcttacaccg
gccgcagtgacagcggctgccggtgcggttccaggaacaccacagggcaagattaacctc
gggggtcagttggctggcggtgtcagctcggtaggatctaccggtggtgtatccagtagt
ggcggtggtggtggtggtggtggtgggggcggtggtcaacctcctcgcgtgaaatccatc
gcgaacgcaaccaacatcgacacactattggtggcaacacaagatcgcgaagagaagatc
attgcaccaccggatgcgatccaggacaagacggcgttcatctttaacaatctcagtctg
gtgaatctgctgcagaagtgcgaggagatcaaggagattctgcagaaggactactatgcc
tggttggcgcagtaccttgtcctgaagcgtgcctcgatcgaggtgaacttccacgtgctc
tactcgaacttcctagatgcactgaaaatcccggaaatcaatcggctggtgacgaaggaa
acgttccgcaacattcgagtgttgctgcgctcggacaagggcattgcgaacttctccgat
cggagcttactgaagaacctgggccactggctgggcatgatgacgttgggtcgcaatcgc
ccgatactgcatctggacatcgacgtcaagtcgctgctggtcgaagcgtacaacaaaggc
caacaggaactgctgtacgtggtaccgttcgtagcgaaggtgctggaatcgtgcgccaag
agtaaggtcttcaaaccaccgaacccctggacgatgtcaatcatgaaccttctggccgag
ctacaccaggaaccggatctaaagctaaatctcaagtttgagattgaggtgctgtgcaag
aaccttaacatcgatgtggccgatctgaaaccggccatctacctgaaggatccggagcga
gcacaaagcatcgagcatcagctgtcgcaaccgaaaccgaaggaggtggtagtgttgccg
caacagcaaccgctcgctacctcctcgacttcgatcgtcggtccatccgtcgtcgctgca
ggtggcgttggtgtcgtagatgagcttggtggcggtgttggtggagctggcccatccagt
tcaccggctgctgctgccgcggcagcaggcattgatggttcgctgggtgctaccggtcca
ccggaaccgcgattccactatgccgacattaacatcacgagcctggcaggcattgcgccg
cacgtaaccttttctccgaacgtggcccttctgcacacgcaaccgcacctgaagcagatc
gtgaaggcagcgctcgagcgtacgatctccgagtggattacaccgatcgtcgagcgcagt
gtcaagatttcgtccaaaacttgcgagcagatcgtccggaaggactttgcgctcgatccg
gacgatgggcggatgcgtcgggcagcgcacaacatgagccgcagtctggtggccggtatg
gcgatgatcacgtgccgcgagcaaatgctccagacgatccagagtagcatcaagacgggc
ttcatggcgtcactgaaccattcgcagaaggaaattgaggcagctgccaatcagttggcg
ctcgataacatcgaactggtgtcggcgtttatccagaagacggctatcgagaaggtggca
acggagatggacaagatactggcgggtgactttgagttgcgtaagatcgcccggcaggag
ggtcggcgttactgtgatgcgagcgtgcttgcttaccaggccgaacgtatgccggaacgg
attcgcctgagcgtcggtggtgtcgcaccaccacagctggcggtgtacgatgaattcgcg
cgcaacattcccggctttctgccaatcaccgagcgtgattcggccttattcgcaccgaaa
cttccggaagtggtaccggccatctcgtttgccacggtaccagatgagatcggagctatg
tacgacgagctggcggccaagatggatgcgttcatcaagacggcccgcctgattccggtg
ctgcaagggcatgccagcaacatggagcatctgctcgagtgtttgatccatgcgcaccgt
tcactagagcacgtctcgggctgcgctctgctacacaaggcggtcgatgggttgctcgag
ggtctggtgaacattcccgaacagctcgaacacatcaagctgtatcgtgatatccatctg
cgcgtcatgcgtttgatgcaggatgcccgcctatttgggccgctgtggaccaacaaagtg
atcacgcgctggttgatcgagtgccgcgaggacatccggtataacgtcgaggcagtggaa
atgctgatctcgtccagctttgtcaacctggagcagtacgatctgatgttggcgcagctg
atgaacaatggcaacaactacgtggcggtcgtgtttggtatgcagctgctgcagacgttc
ttcatcgatgagcagcgccacaattcgctgctaaccgagggcgatctggcggcgacgatg
gagatgctgcaccgactgacggcacatccgcgcgcaccggaaggattggcgcagctgatc
gagatgctgcgcgcaaaccacgatcccaacacgttccttgttgatcgtgcgatcgccgga
ccgacttcgtatatccatgcaggcgtggcacaggcacgatcggatgtagatgatccgcct
gggttccaggaacgtgcggaatatttgctcaaggactgggtggcgattcatcttaacaca
agcaacagccgcgatccgctaaagggtttcagcgtgttcgtggcaaagatgaacatgcac
ggtatcctgaagggtgatgaaccgttgacgcgcttcttccgtttcgccactcagtactgc
atcgatctgacgtatcgtaacatgaacgagccggcagcaaagacgaagatcttttcgttt
atcgatgcgtatgtgcggctgattgcgctgctggtcaaacactcgggtgagagtggcaac
acgagcaccaagctgaatctgctcaataagattctcggcattgtcgtgggtctactactg
caggaccaggagatacacacgaccgcgttccagcaggtcggctatcatcgcatcttcgta
acgctcttcctcgagctgtccgcctccgatccggtgttggagaatattagcctcagcgta
attacggcattctgtcacacgttccatctgctgcgcccggccgcagcacccggtttctgc
tactcgtggctggagctgatctcgcaccgtgtcttcctcggtcgcatattggcgatgata
ccgcagcagaagggttggtacatgtactcgcagctgctgatcgatttgttcaagtatttg
gccccgttcctacggaacgccgagcttgccaaaccggtgcaccatctctacaagggtacg
ctgcgcgtgctgctggtgctgctgcacgatttccccgagtttttgtgcgactatcacttt
gccttctgtgacgttattccgccaaactgcatccagatgcgcaatctgatcctatcgccc
tacccgcgcagcatgcggctacccgatcctttcacacctaatctaaaggttgacatgctg
aacgatatcggtggatcgccccgcgtttcgatcaactacgcggccgccattcaaccggcc
agctttaagaaggatctggattcgtatctgaaggcacgcgcaccagtgaccttcctgtcg
gaactacgttcgaatctgcaaatctcgaacgacgtcggttcgcgctacaatattccgctc
atgaatgcgctcgtactgtacgtgggcacgcaggccatcgctcacatacgttcgaagaac
ctgggtccaactatggctaccattgtgcacagtgcgcatatggatatcttccagaacctg
gccgtagatcttgatacggagggccgctatctcttcctgaacgcgatcgccaatcagtta
cgctatccgaacagtcacacgcactactttagttgctgcattctgtacctgttcggggaa
gcgaactcggaagctattcaggaacaaatcactcgcgttctgctggaacgactgatcgtg
aatcgccctcatccgtggggtttgctgatcaccttcatcgagctgatcaagaacccggtg
tacaaattctgggagcacgactttgtgcactgtgcgccagagatcgcacggctgtttgaa
tcggttgccaaatcgtgcatggtgagcagcaagggtcaacagcaaattcaaaactccgag
ccggacatcgaaaactgcagctag
DBGET
integrated database retrieval system
