Alicyclobacillus dauci: NZD86_00790
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Entry
NZD86_00790 CDS
T08679
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
adau
Alicyclobacillus dauci
Pathway
adau03030
DNA replication
adau03430
Mismatch repair
adau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NZD86_00790
03430 Mismatch repair
NZD86_00790
03440 Homologous recombination
NZD86_00790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adau03032
]
NZD86_00790
03400 DNA repair and recombination proteins [BR:
adau03400
]
NZD86_00790
Enzymes [BR:
adau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NZD86_00790
DNA replication proteins [BR:
adau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NZD86_00790
DNA repair and recombination proteins [BR:
adau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NZD86_00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
tRNA_anti-codon
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
HHH_3
DNA_pol3_tau_5
Zn-ribbon_8
YhfH
Motif
Other DBs
NCBI-ProteinID:
WAH37150
LinkDB
All DBs
Position
173340..177839
Genome browser
AA seq
1499 aa
AA seq
DB search
MGHVEETLLTPEKDNQSSSPLPREVVSRVVSRVVVKQKSGQVEVQLIPPFVQEDKDITGL
AIDEPESRESVSNSGDNELIERYVSDVRLIQQACSVLETENVDVRFVAPRHASPHSYQPM
NVMVMALIDWYAEEYPVAASLLKQAEYRVELVDGTNSRSEELTITFSVRNEMEQKQLEHK
GAPKWLAEKFSSVFGIACRVNFVLDQAADEKVEELRQQLFEEERKQVEIMVAEQENAPKR
EQPEQSDKGYGHQGDRPFRKQREDDGPVEPFTFGRAIDGPLSPIKDIVDEMRRVAVEGRV
FAAETRTLPSGRTLVQFNITDNTDSITAKMFVKNDRQLEALTGLTNGVYLRVQGQVQFDT
FIKELVLLIQDMRPADAPLRKDTAEHKRVELHLHSQMSALDGVAPVKSLVSQAAKWGHTA
IAITDHGVVQSFPEAYSVAKKNGMKCILGMEAYVVDDGVPIVHQLNDGQDVMIDDNTSWV
AFDVETTGLNPAEHMIIEIAAVKMRGSEIVGEWTEMIDPEMPIGRKSVEITGITNEMLEG
KRKLREVLPDFREFVGDAVLVAHNAEFDLSFLKSSAKRIGMEPWTNIVLDTLALARKFYP
TERSYRLGTLAKKFNVELVNAHRALDDTVALAKLFQKMLTDVVGSGVDRLSKLNIDDGAI
NFTSTRPFHATILVQNKTGLKNLYRIVSESHVKYFHRVPRVPRSLITKYREGLLVGSACQ
NGEVFDAILRGKTPEELQDIAKFYDYLEIQPILHYKPLLRNELITSLEAVKDYHRMIIEV
GNALDKPVVATGDVHFVNPEDAIYREIFLQSQNDPTAQDQPPLYFMSTDEMLEAFSYLGP
DLAQEVVVTNSNRVADWIEDVSPVPDKLYTPKIEGAEDEMRTMCYEKARRLYGDPLPEIV
EKRLEKELNSIIKHGFSVIYLIAHKLVKKSLDDGYLVGSRGSVGSSLVATMSDITEVNPL
PPHYRCPSCQYSEFIADGSVGSGFDLPNKNCPKCGETLEKDGHDIPFETFLGFHGDKVPD
IDLNFSGDYQAQAHAYTKVLFGEDYVYRAGTIATVAEKTAFGYVKKFAEEKGWTLRNAEI
SRLVEGCTGIKRTTGQHPGGILVVPDYMDVYDFSPIQFPADDKNSEWRTSHFDFHSIHDN
LLKLDILGHDDPTVIRMLQDLTGLDPKKIPTDDPKVMSLFSGTEALTIDPNKPVTPEKIR
SNTGTFGIPEFGTKFVRQMLEDTKPSTFSELLQISGLSHGTDVWLNNAQKLIQDKVCVLK
DVIGCRDDIMVYLIYAGLEPSLAFKIMESVRKGKGLTPEMEEEMKKNNVPNWYIWSCKQI
KYMFPKAHATAYVLMAVRIAYFKIHYPLEFYATYFSVRADDFDLAIMGRGYEAILSKIEE
IEAKSFQASPKEKALLTVLEMALEMTARGFKFLPLDLYKSDATKFTVVHEENGLLPPFAA
LDGVGDNAAKSIAEAAKQGPFLSVEDLQDKSRASKTVIELLDAYGCLEGLPESNQLSLF
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgggacatgttgaggaaacacttctcacaccggaaaaggacaaccaatccagttctccg
cttccgagagaggttgtttctcgtgttgtttctcgtgttgttgtcaaacaaaagagtggg
caggttgaagtacagctgatccctcctttcgttcaggaggacaaagacataactggtcta
gcaattgacgaaccagagtctcgggaatcggtctcgaattccggcgacaatgagttgatt
gagcggtacgtgagcgatgttcggctgatccaacaagcttgttcggtacttgaaacggaa
aacgtggatgtgcgattcgtcgcgccacgtcacgcttctccacattcataccaaccaatg
aatgtcatggtgatggcattgattgattggtatgccgaagagtatccggttgcggcaagt
ctgttgaagcaggcagagtatcgggtagaactggttgatggaacgaatagccgttctgaa
gagttgaccatcacgttttccgttcgcaacgaaatggaacaaaagcagttggaacataaa
ggtgcacctaaatggttggctgaaaagttttccagcgtgtttggcatcgcgtgccgggtg
aacttcgtacttgaccaggcagctgacgagaaagtcgaggaactgcgacagcagctgttc
gaagaagagcggaagcaagttgaaattatggttgctgagcaggaaaatgccccgaagcgc
gagcagcctgagcagagtgacaaagggtatggacatcagggagacaggccatttcgcaaa
cagcgggaggatgatggtcctgttgaaccgttcacctttggccgcgccattgatggtccg
ctcagtccgattaaagatatcgtcgacgagatgcgccgagtggctgtggaaggtcgtgtc
tttgctgcagagacgcggacattgccgagtggacgaacgcttgttcaatttaacatcacg
gacaatacggattcgatcacggcgaagatgttcgtcaagaatgatcggcagcttgaagcc
ctgactggattgacgaacggcgtgtacctgcgagttcaaggacaagttcagtttgatacg
tttatcaaggaactggtattgctaattcaggatatgcgtcctgccgacgcgccacttcgg
aaggatacggctgaacataaacgggtcgaattgcatttgcactcgcagatgtccgcgctt
gacggcgtcgcacccgtaaagagtctcgtgtcccaagcggcaaagtggggacatacggcg
attgcaataaccgatcacggcgttgtccaatccttcccggaagcttacagcgttgccaaa
aagaatggcatgaaatgcatccttggcatggaagcgtatgtggtcgatgacggtgtcccg
attgtgcaccaattgaatgacgggcaggatgtgatgatcgacgacaacacgtcctgggtt
gcgttcgacgtggagaccactggattgaatccggcggagcatatgatcatcgagatcgcg
gctgtaaaaatgcggggaagtgagattgtcggtgagtggacggaaatgatcgatcccgag
atgcccatcggccgcaagagcgtggaaatcacggggatcaccaacgagatgctggaaggc
aagcggaagttacgtgaggttctccccgacttccgtgaattcgtgggtgatgcggtgctt
gtcgcacacaatgcggaattcgatttgagcttcttaaagtcttcggcgaagcgcattggc
atggagccgtggaccaacatcgttctcgacacactggccttggcaagaaagttttatccg
acggaacgaagctatcgtttgggaacactcgcgaagaagttcaatgtggagttggtcaat
gcgcaccgggcattggatgatacggtggctctggcgaagttgttccagaagatgctgacg
gatgtcgtcggttccggcgtggatcgactttcaaaactcaacatcgacgacggagcgatt
aatttcaccagcacacgcccgttccacgcaaccattttggtgcagaataaaacgggattg
aagaatctctaccggatcgtatccgaatcgcacgtgaagtacttccatcgcgtaccgcgt
gtgccaaggagcctcatcacgaagtatcgcgagggtctgctagttgggagcgcatgtcag
aacggggaagtcttcgatgcgattttgcgggggaagacacctgaagagttgcaggatatc
gcgaagttttatgactacctggagattcagccgatccttcactataagcccctcctgcgc
aatgaattgatcacttccttggaggcagtgaaggactatcaccggatgatcatcgaggtg
gggaacgcgctcgacaaaccggttgtggcaacgggcgacgtgcacttcgtcaacccggag
gacgccatttatcgcgagattttccttcagtcgcagaacgatccgacagcacaggatcaa
ccgccactctatttcatgtcgacggatgaaatgctcgaagcgttctcctatttgggacct
gaccttgctcaggaagtggttgtgacgaacagcaaccgggtggccgattggatcgaagat
gtgtcgccggtgcctgacaagctgtacacgccgaaaatcgaaggcgccgaggacgagatg
cgcacgatgtgctacgaaaaggcacgtcgcttgtatggcgatccgcttccggaaatcgtc
gaaaaacgtctcgagaaagaactaaactcgattatcaaacacggtttctcagtcatctac
ttgattgcacacaagttagtgaagaagtcgctcgacgacgggtacttggttggttcgcgg
ggatcggtcggatcgtcgctggtggccacgatgtccgacatcacggaggtcaatccgctg
ccgccgcactaccgctgtccgtcgtgtcagtacagtgagtttattgcggacggatcggta
ggatctgggttcgacttgccgaacaagaactgtccgaagtgcggcgaaacgctcgaaaag
gacgggcatgacattccgttcgaaacgttcctcggattccacggagacaaggtaccagat
atcgatttgaacttctcaggcgattatcaagcacaggcacacgcatatacgaaggttctg
ttcggtgaggattacgtctaccgcgcgggaaccatcgcaacggtggccgaaaagacggcc
ttcggatatgtgaagaagtttgctgaggaaaaaggctggaccctgcgcaacgcggaaatc
tcgcgtctcgtcgaagggtgcacggggatcaagcgcacgaccggccagcacccaggtggc
atcttggtcgtgcctgactacatggacgtctacgactttagcccaattcaattcccggct
gacgacaagaactctgagtggcggacgtctcacttcgacttccactccattcacgataac
ttgttgaagctcgatattctcgggcacgacgatccgaccgttatccgcatgcttcaagat
ttaactgggctcgatccgaaaaagatccccaccgacgatccgaaagtgatgtcgttgttc
tctggtacggaagcattgacgatagacccgaacaaacctgtgacaccggaaaaaatccgc
tccaacacgggtacgttcggcatccccgagttcggcacgaagtttgttcgccaaatgctg
gaggacacgaagccgagcacgttctcggagttgctgcagatttctggcctatctcacgga
acggacgtctggttgaacaatgcgcagaagttgattcaggataaagtgtgtgtgttgaaa
gacgtgatcggatgccgcgacgacatcatggtttacctgatttacgcgggattggagcca
tcgttggcgttcaagatcatggagagtgtacgtaagggaaaagggctcacgcctgaaatg
gaagaagaaatgaagaagaacaacgtaccgaactggtacatctggtcgtgtaagcagatc
aagtacatgttcccaaaggcccacgcgactgcgtatgtactcatggcggtgcgaattgcc
tacttcaaaatccactatccgctggagttctacgcgacgtatttctccgtgcgggctgac
gattttgatttggccatcatgggtcgagggtatgaagcgatcctttcgaagatcgaggag
attgaagcaaagagcttccaagcttccccgaaagaaaaggcgttgctcaccgtgcttgaa
atggcactcgaaatgactgcacgcggttttaagttcctaccgctcgatctgtataaatcg
gatgcaacgaagtttacggtggttcacgaagaaaacggattgcttccgccattcgcagcg
ctcgacggagtcggcgacaacgcagcaaagagtatcgcggaagccgctaagcagggacca
ttcctatctgttgaggatcttcaggacaagtctcgggcgtcgaagacggtcattgagctg
ctggatgcgtatggatgcctggaaggactccctgaatcgaaccagttatcgctgttttag
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integrated database retrieval system
