Alicyclobacillus dauci: NZD86_05440
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Entry
NZD86_05440 CDS
T08679
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
adau
Alicyclobacillus dauci
Pathway
adau03030
DNA replication
adau03430
Mismatch repair
adau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NZD86_05440 (dnaE)
03430 Mismatch repair
NZD86_05440 (dnaE)
03440 Homologous recombination
NZD86_05440 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adau03032
]
NZD86_05440 (dnaE)
03400 DNA repair and recombination proteins [BR:
adau03400
]
NZD86_05440 (dnaE)
Enzymes [BR:
adau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NZD86_05440 (dnaE)
DNA replication proteins [BR:
adau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NZD86_05440 (dnaE)
DNA repair and recombination proteins [BR:
adau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NZD86_05440 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
WAH37936
LinkDB
All DBs
Position
1093006..1096011
Genome browser
AA seq
1001 aa
AA seq
DB search
MSSFVHLHVHSAYSLRESTLRIEDMIHDAVEYEMPAIALTDTNAMYAAIPFYQAATKANL
RPILGAQLYVSIADEGEKSPQTREQWRHALDPIVVLARNMDGYRALTRLVSLAKSRGHLS
YITFRELAAASTDCVCLVGGGESTLLRQFADTNEERAQRLLSQYANAVPSGQLFADVQDH
QMPIERGGLPGLIKSARALDIPIVATNDVHYRHREDAELHQAYAGLEFEDASVRWPNDAF
YLARPDEMEARFVRLPEAVENTLQVAEMCRLELPLHQVRMPTYTTKDGRATEDVLRNAAV
AGAKQRFGALNEQVLKRLTYELDVICEMGFADYFLVVADFIRFAHQNGISTGPGRGSAAG
SLVAYALRITDVDPVANGLLFERFLNPARVSLPDIDTDFEYERRGEVISYVVSKYGRDKV
AQIGTFGTLAARAAVRDAGRMLQLDGRLVDKMAKMIPGMPGTRLKTAKEEVRGFAEMLAS
DANAKRLYDTACDIEGLPHHTSVHAAGVVISPDSLADWVPLEPGAENIPVTQFAMADVEA
LGLVKMDFLGLKTLTLMDDCLRSVRERTGETIDWRRVPDDDPTTYEMLTRAETGGVFQLD
SPGMKRVLKQLRPTDMDDIVAVISLNRPGPMENIPTFVDAKHGRAPIRYPHPDLEPILRD
TYGVIVYQEQIMHIASLMAGFTLGQADLLRRAVSKKKREVLDEERERFLSGCLKNGYDEK
AANDVYDLIVRFADYGFNRSHAAAYAVLAYRTAYLRAHYLPDFLAALMTMSMASPDKIKT
YTQDARRHQIAVRPPSVSLSGRGYSVDPDGAIRTGLLAIRNVGEGAVESILEARSEKAFS
SLRDFLRRVNSRVVNRKATDSLLAAGAFDEFFPQNSTSHAKVQMLEEALRLADEDRQFAG
LGLVLSEHREASRTTEQKGQEVLYIRYSSRGDDEKQALKRVQQVLQSSPGDVPVALYDGA
TRRTRLLGAKWQVTLSPDLMTMLEDIVGIGNVKVSLKKSTT
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatttgtgcatctgcatgtgcacagtgcgtactccttgagagagagcacgttg
cgcatcgaagacatgattcacgatgcagtggaatatgaaatgccggccattgctttgacg
gacacgaatgcaatgtatgccgcgatcccgttttatcaagcagcgacaaaagcgaatctt
cgccccattctcggtgcccaactttacgtgagcatagcagacgaaggcgaaaagtcaccc
cagacacgtgaacagtggcgtcatgcgctcgatccaattgtcgtcctagcacgcaatatg
gacggctaccgtgccttgacgcgactggtcagtctcgcgaaatctcgcggtcacctttct
tatataacgtttcgtgaattagctgctgcttccactgactgcgtctgcttggtcggtgga
ggagaatccaccctccttagacaatttgcagacaccaacgaagagcgagcacaacgcctg
ctcagtcagtatgcgaacgcagtcccgtctgggcagctctttgcggacgtccaggaccac
cagatgccgattgagcgtggggggctgcctggactgattaagtcggcgcgagcactggat
attcccattgtcgccacgaacgatgtgcactatcgccaccgtgaggacgcagaactgcac
caggcttacgctggcttggagttcgaggacgcgtctgtgcgttggccaaatgacgccttt
tatctggccagaccagatgagatggaggccaggtttgtgaggctccccgaagccgtggag
aacacactgcaggtggcagagatgtgtcggttggaacttccccttcatcaagttcgaatg
cccacctacacgacgaaggacggtcgcgcaactgaggacgtactccgcaacgcggctgtt
gccggcgcgaaacagcgatttggtgccttaaatgagcaggtgttgaaacgcttgacgtat
gaactggatgtcatctgtgagatggggtttgcggactactttctcgtggttgcggatttc
attcgctttgcgcatcaaaatggaatttccacaggaccggggcgtggttcagcggcaggg
agcctggtggcgtatgcgctccggatcacggatgtcgatcccgtcgcaaatggccttctg
tttgaacgcttcttaaacccggcccgcgtatctcttccggatattgacacggactttgaa
tacgagcgtcgcggtgaagtcatcagctatgtggtaagcaagtacggtcgagacaaggtc
gctcaaattggcacctttgggaccttggctgcgagggcagcagtgcgcgatgctgggcgg
atgctccagcttgacggtcgactcgtggataaaatggcaaagatgattcccggtatgcca
gggacgcggctgaagacggcgaaggaagaggtgcgcggctttgcagagatgttggcgtcg
gatgcgaatgccaaacgcctctatgatacggcgtgcgacattgaaggattaccgcatcac
acatcggttcatgcggcgggcgttgtgatctcgcccgattctctggcggattgggttcca
ctggaacccggcgcggaaaatattcctgtgacgcagtttgcgatggctgacgtcgaggcg
ttggggctcgtcaaaatggatttccttggacttaaaacgcttacattgatggatgactgt
ttgcgaagcgtgagagaacgcacgggtgagaccatcgactggcgtcgggtacctgatgac
gatccgacgacctacgagatgctgactcgggcggagacgggtggcgtatttcagttggat
tcgccagggatgaagcgcgttttgaaacaacttcggcccacggatatggatgacattgtc
gccgtcatttccttgaatcgacccggacccatggagaacatcccgactttcgtggacgcg
aaacacgggcgtgcacccatacgttatccgcatccggatttggagccgattttgcgagac
acgtatggcgttattgtctatcaggagcaaatcatgcacattgcttcactgatggcgggc
tttacactcgggcaggcggacttgctacgtcgcgctgtcagcaagaaaaagcgcgaggtg
ctcgatgaggaacgtgaacgattcctgtcaggatgcttgaagaacgggtacgacgaaaag
gcagccaacgacgtgtacgatctcatcgtacgcttcgccgattacggatttaaccgctcg
cacgcggccgcttatgccgtattggcgtatcgcacggcatatttgcgggcgcactattta
ccggattttctggctgccctcatgaccatgtccatggcgtcgccggacaaaatcaaaaca
tacacgcaagacgcacggcgccatcaaattgccgttcgtcctccatctgtaagcctgagc
ggacgaggctattcggtggacccggacggcgcaatccggacgggattactcgctattcgc
aatgtgggcgagggagctgttgagtccattctggaggcgagatcggaaaaagcgttttcg
tctcttcgggattttttgcgaagagtcaactcgcgcgttgtcaatcgcaaagcgacggat
agcctgctcgccgcgggcgcattcgatgaattctttccgcaaaactcgacaagtcacgcc
aaggtacaaatgttggaggaagcactgcggttggcggatgaggatcggcagttcgcaggt
cttggacttgttttaagcgaacaccgggaagcatcgaggacaactgaacaaaagggacaa
gaagttctctatattcgttacagcagtcgtggtgatgacgaaaaacaagccttaaaacgg
gttcagcaggtacttcagtccagcccgggcgatgtgcctgtggcattatatgatggtgcc
acccggcgcacacggttgctcggtgcgaagtggcaggtgacattatcacccgatttgatg
acgatgcttgaagacattgtcgggatcggaaatgtcaaggtgagtttaaagaagtcgacc
acgtag
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