Alicyclobacillus dauci: NZD86_12460
Help
Entry
NZD86_12460 CDS
T08679
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
adau
Alicyclobacillus dauci
Pathway
adau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NZD86_12460
09124 Replication and repair
03420 Nucleotide excision repair
NZD86_12460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adau03021
]
NZD86_12460
03400 DNA repair and recombination proteins [BR:
adau03400
]
NZD86_12460
Enzymes [BR:
adau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NZD86_12460
Transcription machinery [BR:
adau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NZD86_12460
DNA repair and recombination proteins [BR:
adau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NZD86_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
Helicase_C_3
Dfp1_Him1_M
Motif
Other DBs
NCBI-ProteinID:
WAH35131
UniProt:
A0ABY6YX97
LinkDB
All DBs
Position
2435056..2436681
Genome browser
AA seq
541 aa
AA seq
DB search
MYVHDVDSVDRTPAILDLHQFAERIQAMPPIHVYQITNERLWGACREGLTALDVIQCLRN
LAAAPLPLAMQTYIVNTMKRFECLAFVPHPKGLRLVGEPQILQEIQALPSVSKFLKRVRS
GEVIISKGARFSVKMALAAENYSIREDERTGAEEEKLHLDIWLREHVTLRPYQARAVDAF
TEQETTSGVMVLPCGAGKTVVGVGVMTRLKLRTLVLVPNEAAAAQWYTHIVKWTTLREED
VCIDDGKGDLRPVTITTYQRLTAKRRSGEYHQFHRYTESDWGLIIYDEVHLLPAPLFRFA
ADLQGARRLGLSATLIREDGRASDVFSLVGPKCFEIYAEDLVREGYLSHVRCTEVRVPLD
DLTRQKYEQASVRMRHRIAADNKAKLDVVKDICAKHRADQILIMGHYTAFLAIVADAMNC
PMLSGETPRNVRLETYERFRAGELPILVLSRIANVAVDLPNADVAIQISGLFGSRQEEAQ
RLGRLLRPKAQGGHFYTLVSDGTIEEKTAAHRQRFLVEHGFAYNQCTAADFSEGTNEIET
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
ttgtatgtacacgatgtggatagtgtggatagaacgccggcaattctcgatcttcatcag
tttgctgagcggatacaagctatgcctccaattcatgtctaccaaataaccaacgagcgg
ctttggggggcatgccgagaaggtctcacggcactggatgtcattcaatgtttacgaaat
ctcgctgcagctccacttcctctcgccatgcaaacgtacattgtcaacacgatgaaacgg
ttcgagtgtcttgcctttgttccacatccgaaagggttgagacttgtcggtgaaccgcag
attctacaggagattcaagcactcccctccgtgtccaagtttctgaagagagtgagatcg
ggtgaggtgatcatttctaagggcgcccgattctctgtcaaaatggcactcgctgcagag
aactattcaatccgtgaggatgaacggactggagcagaggaggagaaacttcaccttgac
atttggctacgcgaacacgtcacactccgtccgtatcaagcccgcgcggttgatgccttt
accgaacaggaaacgacgtccggtgtcatggttctaccttgtggcgctggaaaaactgtg
gtcggtgtgggcgtcatgacgagactaaagctccgaacactcgtcttagtaccgaatgag
gcggccgctgcccagtggtatacacacatcgttaaatggacgacattgagagaagaggac
gtctgtatcgacgatggaaagggagatcttcgtccagtgaccatcacgacttaccagcgc
ctcacagccaaaaggcgatcgggcgaatatcaccagtttcaccgctacacggagagcgac
tggggcctcatcatttacgatgaagttcatttactgcctgcccctctgttccggttcgca
gcagatctccaaggcgccaggcgactggggctcagtgcgacgcttatccgcgaggacgga
cgagcatctgatgtgttttcactcgttggaccaaagtgttttgaaatatatgcagaagat
ctcgttcgtgaagggtatctgtcacatgttcgatgcacggaagtccgtgttccgcttgac
gacttgacacgacaaaagtacgaacaagcatcggtccgtatgcgtcatcgaattgcagcg
gacaacaaagcgaaactggacgtcgtgaaagacatctgcgcaaagcatcgtgcggaccaa
attctcattatggggcattatacggcgtttttggcaatcgtcgcagatgcgatgaactgt
cccatgctcagtggggaaacaccgagaaacgtgcgcttagagacctacgagcggtttcgc
gcgggcgagcttccgatcttagtactctcccgtattgcgaacgtagcagttgatttgccg
aatgcggacgtggccatccaaatctccggattgtttggatctaggcaagaagaggctcaa
cgtctgggacgattgttgcggccgaaggcgcagggaggtcatttttacacgttggtaagc
gatggaaccatcgaggagaaaactgcagcacaccgacagcgtttcctggtcgaacacggg
tttgcctacaatcaatgtaccgccgctgacttcagcgaagggacgaatgaaattgaaact
caatga
DBGET
integrated database retrieval system
