Alicyclobacillus dauci: NZD86_14030
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Entry
NZD86_14030 CDS
T08679
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
adau
Alicyclobacillus dauci
Brite
KEGG Orthology (KO) [BR:
adau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adau03032
]
NZD86_14030 (topA)
03400 DNA repair and recombination proteins [BR:
adau03400
]
NZD86_14030 (topA)
Enzymes [BR:
adau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NZD86_14030 (topA)
DNA replication proteins [BR:
adau03032
]
Prokaryotic type
DNA Topoisomerases
NZD86_14030 (topA)
DNA repair and recombination proteins [BR:
adau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NZD86_14030 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_RPB9
Toprim_4
Auto_anti-p27
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
WAH35415
LinkDB
All DBs
Position
complement(2750949..2753054)
Genome browser
AA seq
701 aa
AA seq
DB search
MADYLVIVESPAKAKTIGKYLGKRYAVKASMGHVRDLPKSQLGVDVEHGYEPKYITIRGK
GDVIKSLRTASKKAKKVFLAADPDREGEAIAWHLQHILELNPDDQCRVVFHEITKDAVKN
AFKSPRKIDMDLVNAQQTRRILDRLVGYRLSPLLWRKVKKGLSAGRVQSVAVRLIVDREK
EIRKFQPEEYWTVDVTCPVDSKKLTSRFYGYDEVKTPLPNEEAVNELLKRIEGQPLNVRK
VKKSERRRNPAAPFTTSSLQQESARKLGFRAYKTMAVAQQLYEGLDIPGEGTVGLITYMR
TDSTRIAESAQSEARDYIRSEFGAPYVPDKPRQYSKKDDAQDAHEGIRPTSTLRHPEQIK
DHLSRDQYRLYKLIWERFVASQMASAVLDTTSIDSEANGAWFRATGSVIRFPGFMAVYIE
GKDDGDEDEDSKLLPPVSEGQVLKQSKVVPEQHFTQPPPRYSESSLVKAMEELGIGRPST
YAPTIDTILKRGYVLLEQKRFIPTELGEIVVELLVENFNQLIDVDFTANLEGELDSVEEG
YADWVKLLDGFYNQFERDLEHAEESLEHVELKDEVSDIPCEKCGKMMVYKNGRYGKFLAC
PGFPECRNTKAITKEVGVNCPKCGKPLLERRGKRRKVFYGCSGYPDCDYVLWQKPTGQLC
PICEHPMVEKHAKGKVSVVCSNEKAHPHAAPLEESEKRKSS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtggccgattatttagtgatcgtcgaatcgcccgcgaaggccaagactatcggtaagtac
ttggggaagcgatatgcggttaaagcctccatgggacacgttcgggacctgccgaaatca
cagctcggtgtcgacgtggagcatggatatgagcctaaatatataaccatccgcggtaaa
ggcgacgtcattaagtctttgcgcacggcgagtaagaaagcgaagaaagtctttcttgca
gccgaccctgatcgtgaaggggaagcgattgcatggcatctacaacacattttggagttg
aatccggacgaccaatgtcgtgttgtctttcacgaaatcacgaaggatgccgttaaaaac
gcttttaagagtccccgcaaaatcgacatggatctggtcaacgctcaacagactcgccgt
attctcgatagactcgtgggttatcggctgagtcctttattgtggcgtaaggtaaaaaaa
gggttgtcggcggggcgtgttcagtctgtggctgtgcgcttaatcgtggatcgggaaaaa
gaaattcgaaagttccaaccggaggagtattggacggtggacgtgacatgtcctgttgac
tccaagaagcttacctcccggttttatggatacgacgaagtaaagaccccactgccgaat
gaggaggcagtcaacgagctgctcaaacgtattgagggtcaacccctgaatgttcgcaag
gtgaaaaaatcagagcgcaggcgcaaccctgccgctccctttacaacgagcagcttacaa
caggaatctgcgcggaaacttggttttcgtgcttacaaaacgatggccgttgcacagcaa
ttatacgaaggtttggatatccctggcgaggggacggtcggtttgatcacgtacatgcgt
actgattcaactcggatcgcagagtcagctcagagcgaggcacgcgattatattcgttcc
gaatttggcgcgccgtatgttccggataaaccgcgccagtacagtaagaaggacgacgcc
caggacgcgcatgagggtatccgtcccacatcaacgcttcgtcacccagagcagataaag
gaccatttgtcccgagatcagtatcgattgtacaaattgatttgggaacgttttgtagct
agccaaatggcgtccgcagtgttggatacgacgtcaattgattcagaggcaaacggtgca
tggtttcgggcaactggctctgttattcgctttcctgggttcatggccgtgtatatcgaa
ggcaaggacgacggggatgaggatgaggacagcaagctgttgccgccagtaagtgagggg
caagtgttaaaacagtcgaaagtcgtgcccgaacaacactttacccagccaccaccgcga
tacagtgaatcgagtctcgtgaaggccatggaggaacttggtattggtcgtccgagtacg
tatgccccgaccatcgacaccatcttgaagcgcggctatgtgcttctcgaacagaagcga
tttatcccaactgagttgggtgaaatcgtcgtcgagcttctggtggaaaactttaatcag
ttgatcgacgtagacttcacggcgaatctggagggtgaactcgactctgtggaggaaggg
tacgctgactgggtcaaattgctggatggattttacaaccaattcgagcgggatctggag
catgcagaagaatcgttggaacatgtggaactaaaggacgaggtttctgatatcccctgt
gaaaaatgtggcaagatgatggtctataaaaacggacgctatggaaaatttcttgcttgt
cccgggtttccagaatgccggaatacgaaagccatcacgaaggaagtgggcgtgaactgc
ccgaaatgcgggaaaccgcttctagaacggcgtggcaagcgccgaaaagtgttttacggc
tgtagcggctatccagactgtgattatgtgttgtggcagaaaccgaccggacaactgtgc
cctatctgtgaacatccaatggttgagaagcacgctaagggtaaagtgagtgttgtttgc
agcaatgagaaggctcacccacatgcagccccactggaagagtcggagaagcggaagtcg
tcttaa
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