Alicyclobacillus dauci: NZD86_16490
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Entry
NZD86_16490 CDS
T08679
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
adau
Alicyclobacillus dauci
Pathway
adau03420
Nucleotide excision repair
adau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NZD86_16490
03430 Mismatch repair
NZD86_16490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adau03400
]
NZD86_16490
Enzymes [BR:
adau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NZD86_16490
DNA repair and recombination proteins [BR:
adau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NZD86_16490
MMR (mismatch excision repair)
Other MMR factors
NZD86_16490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
ResIII
DEAD
AAA_11
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WAH35852
LinkDB
All DBs
Position
complement(3245881..3248019)
Genome browser
AA seq
712 aa
AA seq
DB search
MSEERVNLLEGLNPEQKQAVQTVDGPLLVVAGAGSGKTSVLTRRIAYLISQHAVPVHQIL
AITFTNKAAREMKDRIRKFIGRRAEDLWMGTFHSICVRILRREAEAIGYTPNFTILDSDD
QQALIAQSLLDLNLDLKKFDPRQILSRISQWKNLMQSFQTVKKLPNLESLDDVVAADVYE
LYQSRLVGANAMDFDDLIIQTVRLLKQNEEVRKRYQDKFRYILIDEYQDTNHAQYQLVQT
LAEAHRNLCAVGDADQAIYAWRGADIENMLRFERDYPEAQVILLERNYRSTEAILSAANA
LIKNNRKRKEKMLRAVRGRGDNVAVCCLTDSEQEAKFVAESIAQHVQNGGSYGDCAILYR
ANAQSRVVEEALMGLAIPYTIVGGLTFYDRREIKDVFCYLRVLTNPKDEISLLRIINTPR
RGLGDSTVGRLLDYAHAEGKTLFEALEDGASAGLSNKASESAKQFHAQLQELMLWMEGMP
VSEYLAEVLHSIKYREMYLQSGKKEDLQRVENIDELFSVTKSFDKRRGGTVQEFLAEVSL
LSEVDKERDKGQGNVRLMTMHASKGLEFPIVFLIGVEEGLFPHPRSMDDERAVEEERNLC
YVGMTRAMNQLYMTYAVERTLFGHVTNREPSRFLSELPEEWVTRMDLAVQHNAVITPGQY
VRHVQYGEGIVLHLAADKDGGGDQAQVMFHPSVGMKWVSKNLLRPKEESVVQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagaggaacgtgtgaatctgctcgaaggactgaatccggaacagaagcaggccgtt
caaacagtggacgggccactattggtcgtggctggcgccggaagtggcaagaccagtgtc
ttaacccggcgcatcgcctatttgattagccagcacgcggttccagtgcatcagatcttg
gcgatcacatttacaaataaggccgcacgggaaatgaaagatcggatacgtaaatttatc
ggccgacgggcggaagatctgtggatgggtacctttcacagtatctgcgtgcgcattctg
aggcgcgaggcggaggccattgggtatacgcccaatttcaccatcctcgacagtgatgac
cagcaagcactgattgctcagtctctacttgatttaaatctcgacttgaaaaagttcgat
cctcgtcaaattctaagcagaatttcgcagtggaagaacctcatgcaatcgtttcaaacg
gtaaagaagcttccaaacctggaaagtttggatgatgtcgtggcggcagacgtctacgag
ttgtaccagtcgcggctggtcggggcaaatgccatggatttcgacgatttgatcattcaa
acggttcgcttgctgaagcagaatgaagaagttcgcaaacgatatcaggacaagtttcgc
tatattctcattgacgagtatcaggatacgaaccatgcgcaatatcagctggttcagacg
ctggcagaggcacatcggaatctctgcgccgtcggtgacgcggaccaagcgatctacgca
tggcgtggcgcagatatcgagaacatgctgcggtttgaacgcgactacccagaggcacaa
gtcattctgctcgagcgaaactaccgctcaaccgaggctatcctttctgccgcgaatgcc
ctgattaaaaacaatcgaaaacgcaaagaaaaaatgcttcgtgctgtacgcgggcgaggc
gataatgtggctgtttgctgtctgacggacagtgagcaagaggcaaagtttgtcgcagag
agcatcgctcagcatgttcagaacggcggatcgtatggggattgcgctattctctatcga
gccaacgcacagtcacgcgtcgtcgaagaagcactcatggggctggccattccatacacc
attgtgggtggtttgacgttctatgatcggcgtgagatcaaggatgttttttgttatttg
cgggtactgacgaacccgaaagacgaaatttccttgttgcgaattatcaacacgccaaga
cgcggacttggggactccacggttggacggctgctggattatgcccatgctgagggaaaa
accttgtttgaagccttggaagatggagcatccgccggcctgtcgaacaaagcgagcgaa
tccgccaaacaattccacgcgcaattgcaagaattgatgctgtggatggaagggatgccg
gtcagcgaatacttggcagaagtcttgcactcgataaagtatcgtgagatgtatcttcaa
agtgggaaaaaggaagacttgcagcgagtggaaaacatcgatgagctgttcagtgtgacc
aagtcgtttgacaagcgccggggaggaacggtccaggagtttctggctgaagtcagtctg
ttgagtgaagtcgacaaggaacgcgacaagggccaaggaaacgttcgactgatgacaatg
cacgccagtaaagggctcgagtttcccatcgtgtttctaattggggtcgaggaagggttg
tttcctcatccgcggtcaatggatgacgaacgcgcggttgaagaagaacgaaatctttgt
tacgttggcatgacacgggcaatgaatcaactatatatgacatatgccgtagagcggaca
ctgtttggacatgtcacaaaccgtgagccgtctcgattcttaagcgagctacccgaggag
tgggtgacacgtatggacttggccgttcaacacaatgccgtcatcacgccgggtcagtac
gtgcgccatgtgcagtacggtgagggaattgtcctgcatttggctgctgacaaggacggt
gggggagatcaggctcaggtcatgtttcacccttctgtagggatgaagtgggtgagcaag
aatctattgcggcctaaagaagaatccgtggtacaatag
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