Alicyclobacillus dauci: NZD86_17350
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Entry
NZD86_17350 CDS
T08679
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
adau
Alicyclobacillus dauci
Pathway
adau03420
Nucleotide excision repair
adau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NZD86_17350
03430 Mismatch repair
NZD86_17350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adau03400
]
NZD86_17350
Enzymes [BR:
adau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NZD86_17350
DNA repair and recombination proteins [BR:
adau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NZD86_17350
MMR (mismatch excision repair)
Other MMR factors
NZD86_17350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
AAA_30
AAA_16
AAA_22
DEAD
NACHT
AAA_11
ResIII
nSTAND3
DUF1846
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WAH36007
LinkDB
All DBs
Position
complement(3419028..3421193)
Genome browser
AA seq
721 aa
AA seq
DB search
MMESSEFDSAPMDKLQEEQAHLLDVLNKIRKQFGPGGATLLEIDDSDDADEALTADEIAE
ATVEQLKLEKLRNLRIAEREPYFGRLDFCERGGSQCHRMYIGKRGIDDPDTADRMILDWR
APAASMFYSFTGQGEEAGYEAPEGLIQGRVFLKRNIVVRDSELQRVVDSYVHGQSQAAIT
DEFLLYRLEENKDSRLRDIVSTIQAEQNDIIRADRNLAIIIQGVAGSGKTTVALHRLAYL
LYQHQDRMRADRMVIFAPNSMFVDYISEVLPELGVGGIQQTTFANWALRVLDYEVGLQDQ
SHRLRDWFGLKDERARADAYRDVGTKGSVALMDELHEYLQRFEVEAVPDEDFIPFEGKVL
AKDTIEQWYRQDYRNYPLADRRDRVLARVKRWMEISVKESTEADKKSLKRAATAKYRAYE
KLWPTLKPLNLYREFLDSHGQLNSDSIYRPKKRGARVEVQVEDLAPLLYIHATLHGVDHR
DRFDHVVIDEAQDFSPFQIAVLRAYCPSGSFTILGDLSQSIHTYQGITDWREFADLFEEG
ESAYYQLDVSYRSTLEIIEFANHIIRRFRQFREAKPVFRSGEQVVVEDIEWKVRLEAAAD
KLYELKRDANTVALLTRTEEDAHVYHLACLEAGLDAHLIDAKQTEYMGGISIVPIYLAKG
LEFDSVLIVDADARHYDESPLSAKLLYVGCTRALHRLCIQYTDELSPLIDASHGQRNSTA
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtcgagcgagttcgattctgcccctatggataaacttcaggaggaacaagcg
catttactggatgtcctcaataaaatccgcaagcaattcgggccgggcggtgcaacactc
ctcgaaattgacgattccgacgacgcggatgaagcgctgacagcggatgaaattgcggaa
gccacggtggaacagttgaaactcgagaaacttcggaatcttcgcattgccgagcgagaa
ccttattttggccgactagatttttgtgagcggggcggatcacagtgccaccggatgtac
atcggaaagcgcggcatcgacgatcccgacactgcagaccgaatgatcctcgactggcgt
gcaccagccgccagcatgttttattccttcaccggacagggagaggaagcaggttacgaa
gcgccagagggattgattcaaggacgggtgttcctgaagcgaaacattgtcgttcgcgac
agcgaactccagcgcgtcgttgacagctacgtccacggacaaagccaagcggccataacg
gacgagtttcttctctacagattagaggagaataaggacagtcggctgcgggacatcgtt
tccaccatccaggcagagcagaacgacattattcgcgccgacagaaacttggccatcatc
atccaaggtgtagctggaagcggaaagacaacggtggcattgcaccggctcgcctatttg
ttgtatcagcatcaggatcggatgcgggcggatcggatggtcatttttgcaccgaactcc
atgtttgtggactacatttcagaagtcctgccggaactcggcgttggcgggattcagcag
acgacgtttgccaactgggcactgcgggtgttggattacgaagtgggtcttcaagatcag
agccatcgcctgcgcgactggtttggcttaaaggacgaaagagcgcgtgcagatgcgtac
cgagacgtcggtacaaagggctctgtggccttgatggatgaacttcacgagtatcttcag
cgattcgaagtagaggctgtgccggacgaagattttataccgtttgagggcaaagtcctt
gccaaggacacgattgaacagtggtacaggcaagactatcgtaactatccgttggcggat
cggcgggatcgagtacttgctcgcgtcaagcggtggatggagatttccgtaaaagaaagc
actgaggcggataaaaaatcactcaagcgggctgctacggccaagtatcgggcatatgaa
aaattgtggcccactctgaagccccttaacttgtaccgagaatttctggattcgcacgga
caactgaattccgacagcatttatcgtccgaaaaagcgcggcgctcgcgttgaagttcaa
gtcgaagacttggcaccgcttctgtacatacatgcaactcttcatggggtggatcaccgt
gacaggttcgatcacgtcgtcatcgacgaagcccaagacttctcaccatttcaaattgcc
gttcttcgggcttactgtcccagtggctccttcactatccttggcgatctatcgcaaagc
attcacacatatcaagggataacggactggcgcgaatttgcagatctgtttgaggagggc
gagtccgcatactatcagttggatgtcagttaccgatcgacgctggagattatcgagttt
gcgaaccatatcattcgccggtttcgccaattccgcgaagccaaacccgtctttcgcagt
ggcgagcaagtggttgtggaggacatcgagtggaaagttcggttggaagccgctgccgac
aaactgtatgagttaaaacgcgatgccaacacggttgcactgttgactcgcacggaggaa
gacgcacatgtataccacctggcgtgtctggaggcagggcttgatgcacacctgattgac
gccaaacagacagagtatatgggcggtatctccatcgtccccatctatttggccaaagga
ttggagtttgactcggtcctcatcgtcgacgcggacgcccgccactacgacgagtcacct
ctctcggcaaagttgctttacgtagggtgtacacgcgcacttcaccgattgtgcatccag
tacacggacgagttgtcgccccttatcgacgcgagtcatggacagcgcaacagtactgcg
tcgtga
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