Alicyclobacillus dauci: NZD86_18440
Help
Entry
NZD86_18440 CDS
T08679
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
adau
Alicyclobacillus dauci
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
PAS_4
PAS_9
PAS_8
AAA_5
AAA_2
AAA
HTH_28
PAS_7
HTH_23
Mg_chelatase
Xre-like-HTH
AAA_16
HTH_30
UPF0175
nSTAND3
PAS_10
bpMoxR
AAA_3
HTH_29
Motif
Other DBs
NCBI-ProteinID:
WAH36201
LinkDB
All DBs
Position
complement(3641587..3643005)
Genome browser
AA seq
472 aa
AA seq
DB search
MRNNETVMNYLNSNEFQPPITSNFPLAQVLSSMQDGVVVVDKEGTIVYANPSYTRILGVP
VNRVIGRHMRNVERDARILTVLKTGRAILQEPIFLKSLGVELVADATPLYNKQGEIIGGV
TIFKKSGEVVQFYEALRRLEVVKTEQPTYQERDEAFSHVVGEDKNFLDLIHRAAQAAKSP
ATVLLSGESGVGKEIFAEAIHKCSERADKPFVKINCAALPDSILESELFGYEEGTFTGAK
RGGKCGKIEAAQGGTLFLDEIGDMSLNAQTKVLRVLQEREFERLGGHQTIRVNIRVIAAT
NQDLKLLVKKGKFREDLFYRINVIPLNIPALRERRQDTGPLVRYFLHQCEQVYGKKLTID
ESIITNLESYHWPGNVRQLRNAVEHAVVFSKGSSIRFDAFPEEIKEHLEADMGEAHSLRE
EMGDNVSDTTSECEKILEALKQTNYNRSKAIELLGISRRTFYQRIKKYGISL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaataacgaaacggtaatgaactatttaaattcgaatgaatttcaacctcctatc
acctccaatttcccactggcacaggtgctctcttccatgcaagatggtgttgttgtagtg
gataaggaggggactatcgtttatgccaatccttcttatacgcgaattttgggtgtacca
gtcaatcgcgtcatcggtcgtcacatgcgaaacgtagaaagagacgcgagaatcttaacg
gttcttaaaaccgggcgagcgattttacaagagcccatattcttgaaatctctaggtgtt
gagttagttgccgatgctacccccctgtacaataagcagggggaaatcatcggcggagtt
accatttttaagaaatctggcgaagttgtgcaattttacgaagctcttcgccgcctggaa
gttgttaagacggaacaacctacttatcaagaacgggatgaagcttttagccatgtagtt
ggggaagataaaaacttcctcgacttgatccatcgagctgcacaagccgcaaaatcaccc
gctaccgtgctgttatcgggagaaagtggagtcggaaaagaaatatttgcagaagccatc
cataagtgcagcgaacgcgctgataaaccctttgttaagatcaactgtgcggcattaccg
gattcgattctcgagtcagaactgttcggttatgaggaagggacttttactggagcaaag
cgtggggggaaatgcggcaagattgaggcagcacaaggtggcactttatttttggatgaa
ataggggacatgagcctcaacgcccaaacgaaagttctccgagttttgcaagaaagggaa
tttgaaaggttgggtggccatcaaacaataagggtgaatataagagttatagcagcaacc
aatcaagaccttaaactcttagtgaaaaaaggcaagtttcgtgaggacttgttttaccgt
atcaatgtgattcctctcaatattcctgctctgcgtgaaagaaggcaggacaccggcccg
cttgttcgttattttttgcatcaatgcgaacaggtatatggaaagaaattgacgattgat
gaatccataataaccaatcttgaaagttatcattggcctggaaatgtacggcaactcaga
aatgctgtggaacacgcggttgtcttttcaaagggctctagcatcagattcgatgccttt
ccggaagagatcaaggaacacttggaggctgatatgggcgaagcccattcgttaagagag
gaaatgggggacaacgtctcagacactacttcggagtgtgaaaaaatccttgaagcgttg
aaacaaaccaactataaccggtcaaaggcgattgaattgcttgggattagtagacgaacc
ttttatcaacggataaagaagtatggcatttcactgtaa
DBGET
integrated database retrieval system
