Alicyclobacillus dauci: NZD86_20485
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Entry
NZD86_20485 CDS
T08679
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
adau
Alicyclobacillus dauci
Pathway
adau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NZD86_20485 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adau03019
]
NZD86_20485 (recQ)
03400 DNA repair and recombination proteins [BR:
adau03400
]
NZD86_20485 (recQ)
Enzymes [BR:
adau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NZD86_20485 (recQ)
Messenger RNA biogenesis [BR:
adau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NZD86_20485 (recQ)
DNA repair and recombination proteins [BR:
adau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NZD86_20485 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WAH36555
LinkDB
All DBs
Position
complement(4075594..4077813)
Genome browser
AA seq
739 aa
AA seq
DB search
MSTVSTQIQKAAGLLQKYFGYERFRPGQEDIVASILSGQDTIGIMPTGGGKSICYQIPAL
MQEGLTVVVSPLISLMKDQVDTLDSVGINATYINSSLSASEAEERLNFVRSGACKLLYVA
PERLESASFRYMINRLQPSMFAIDEAHCLSQWGHDFRPSYRAIAAVIDELDHRPLIAAFT
ATATPAVVSDIADLLDLVKPAIHVTGFDRENLSFAVIHGQNKRDYITAYLKNHPSESGVI
YASTRKEVDSLYEFLHKKGFLVGRYHAGLSDDERMENQERFLFDDVRIMIATNAFGMGID
KSNIRFVLHHNMPKNIEAYYQEAGRAGRDGDPGECILLYSPQDVQVQKFLIEQTVLQPDR
KRMEYERLQTMVDYCHMTSCLRAYILRYFGEEAGERCDNCSNCKQDFETRDITIEAQKIF
SCVHRTKERFGMKMIAAVLRGSSNQRVRDLGLNKVSTFGLMADRTEKDIMSYLQTLVADG
YLRLTTGQYPVVRLQEKAVAVLKGEVTVLMRVVRKGRALQISDPLFEELRALRREIAERE
NVPPYVVFADSTLREMASVMPTDISALRTIKGVGDVKVSRYGTDFLRVIRDFGERHGNDE
SASVPKQRSVEAIPVEFTDHETSTDSTSHSHRGPKQPTNVADETPSHIQSFELFQAGKEV
EEISSERGLSTITIEGHLIRCAQEGHPIDWARIFSEPAEAQILTAIDAVGSDKLKPIKEA
LPDDISYFMIRAVIAKHGL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtgagcacacaaattcagaaagccgcaggccttcttcagaaatattttgga
tacgaacgctttcgcccgggtcaggaagacatcgttgccagcattttgtctggtcaagac
acaatcggcatcatgccaaccggcgggggaaagtcaatttgttatcaaatccccgccctc
atgcaggaagggctgacggtggtcgtatcgccgctcatttcgctcatgaaggaccaagtc
gatacgctcgacagtgttggcatcaacgcgacgtacatcaacagttccttatctgcttcc
gaggctgaagaacggctcaattttgtccgcagcggagcttgcaaactgctttacgtggcg
ccggagcgcttggagtctgcctcgtttcggtacatgatcaatcggttacaaccctccatg
tttgccatcgacgaagcgcactgcttgtcgcagtggggacacgattttcgcccaagctac
cgtgccattgctgcagtcattgatgagctagatcatcggcctctcatcgctgcgtttacc
gcaacagccacgccggctgtcgtcagcgatatagccgatttgctcgacttggtcaagcca
gccattcatgtgacgggatttgaccgggaaaatctttcgttcgccgtcattcacggccag
aataaacgggattacatcacggcgtacctcaaaaatcacccttccgaatccggtgtaatt
tacgcatcaacgcgcaaagaagtcgattccttgtacgagtttctgcacaagaaagggttc
ctcgttgggcgctaccatgcaggcctcagtgatgacgaacggatggaaaatcaagaacga
ttcctctttgatgatgtgcggattatgattgccacaaatgcctttggcatgggcatcgac
aagtcaaatatccgctttgtactccaccacaacatgccgaaaaacatcgaagcgtattac
caagaagccggtcgtgcgggacgcgacggtgatccaggcgagtgcatcttgctgtacagt
cctcaggatgtacaggtgcaaaagttcctgatcgaacagacggttttgcagccggatcga
aaacgaatggagtatgagcggcttcagacgatggtcgactactgtcacatgaccagttgt
ctccgagcgtatatcttgcgatatttcggcgaagaagcaggcgaacgatgcgataactgc
agcaactgcaaacaggatttcgaaacgcgcgacatcacgattgaggcacagaaaatcttc
tcgtgcgttcatcggacgaaagagcggtttgggatgaagatgatcgctgcggtgttgcgg
gggtcgtccaaccaacgcgtgcgcgacttgggcttaaacaaagtgtctacgttcggactc
atggccgatcgtacggagaaagacatcatgagctatctgcaaacgctcgtcgccgacggc
tacttgcggttgacgacgggtcaatatcccgttgtccgtttgcaagaaaaggccgtcgcg
gtgttgaagggtgaagtcaccgtcctgatgagggtggtccgtaaaggacgagctcttcag
atttccgatccgctgtttgaagaacttcgtgcactgcgcagggagatcgcagaacgagag
aacgtcccgccttacgtcgtatttgccgacagcaccctgcgcgagatggcttccgtcatg
cctacggacatctctgccctgcgaaccatcaaaggtgttggcgatgtgaaggtgagccga
tacggaacggattttctacgggtcatacgcgactttggtgagcggcatggaaatgacgaa
tctgcctccgtgccgaagcagcgttcagtagaggctattcccgtagaattcactgatcat
gagacgagcactgactcaacatcacacagccacagaggcccgaagcagccaacgaacgtt
gcggacgaaacaccgagtcacatacaatcgtttgaattattccaagcagggaaagaggtc
gaggagatctcatccgaacgcggactatccaccatcacgattgaaggccacctcattcgc
tgcgcccaagaaggtcatccaattgactgggcgaggatcttttcagaacccgctgaagca
caaattctaaccgccattgacgcggtaggatcggataagctgaagcccatcaaagaagcg
ctgccagacgatatcagctacttcatgatccgcgccgtcattgcgaagcatggcctgtag
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